Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1221 ATGACCATGCAGTTCAGACTAGGCAAGCGCGTTTTCCGTGTCGCCACATGGGTCTTCCGTCGGGTTCGGTTCAGAACCCGACCCAACAGATATTGTCGTCTCGGATCCACCTCTCCTTCGCACAGTTACAATCATAATCCCATGACGAAGCTTCTTACATGGGGGACAAAGTTGAAGAGAGGAGCGCAGTCTCTCTGTAAGAAATCCGGGTCGGCTCTCGTTTGCGAGAGGGCTCCGGCGGTGCCGAAAGGGCACTTGGCAGTTTACGTGGCCGAGGACAACGGCGAGTGTCGCCGGGTTTTGGTGCCAGTGATTTACTTCAACCATCCTCTGTTCAGCGGGTTGTTAAGGGAAGCTGAGAAGGAATTCGGGTTCGAGCACCCCGGTGGGATCACGATTCCGTGCCGACTCACCGAATTTGAACGGGTCAAAACCCGAATAGCGTCCGGGTCGGGTTTACGTGGGAGAACCCGGAGGTTGGGGTGGCGGCTACATTCTTCTTGA 504 0.5556 MTMQFRLGKRVFRVATWVFRRVRFRTRPNRYCRLGSTSPSHSYNHNPMTKLLTWGTKLKRGAQSLCKKSGSALVCERAPAVPKGHLAVYVAEDNGECRRVLVPVIYFNHPLFSGLLREAEKEFGFEHPGGITIPCRLTEFERVKTRIASGSGLRGRTRRLGWRLHSS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1221 167 Pfam Auxin responsive protein 68 144 IPR003676 GO:0009733
Vra9g1221 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 157 IPR003676 GO:0009733
Vra9g1221 167 PANTHER SMALL AUXIN-UP RNA-RELATED 4 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1221 Vra-Chr9 18770594 18771710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1221 76 140 Calmodulin-binding Proteins AT3G43120 49.231 4.17e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1221 K14488 - gmx:100808164 222.631