Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1209 ATGGCTCAACTCAACCTCGCATTTTTTCCTATGATCTTCCTCTCTTTCTCCTTGTCATTTCTTGCCACCCCAGTTGAGCCATCATCATTGACAAGGCACAGAAACCCTAAAACAATGACCTACATAGAGTCCTCTTGCAAAGGCACCCTGTACCCTAATCTCTGCATCCGTTGTCTTTCCCAATATGCTAAATCCCCCTTAAATGGCCCACAGCACTTGGCTCAACATGCCTTATCAGTGAGCCTCTCTAGAGCACTGCACACAAAAGGGTACCTTTTGGAAGTGGCAAAGGAGCTTCAAGCCATCAAGAGCAACAAAAAAGAGTACCTAACAGTGCAAGACTGTGTGAACCAAATCAGTGATAGTGTGGAACAAATTAGCCAAGCCATGAAAGAACTGCGTAGCTTCAACAAACATGATTCAAGCATGAATGATAACATGTTGTGGCACATAAGCAATGTTGAGACATGGGTGAGCACAGCTTTGACAGATGCCAGTAGTTGTGTGTACTCATTTCCTGGGAATAGAATGAGTAAGAGAGTAGCTGCTATTAAGGTTAAGGCTAAGAATGTTGCAGAAGTTACAAGTAATGCTCTTTTCTTGTTCCATAGATATGCATCTACCTACCAGAAAGCCACAATGAACACCAGTAATTCCTAA 660 0.4288 MAQLNLAFFPMIFLSFSLSFLATPVEPSSLTRHRNPKTMTYIESSCKGTLYPNLCIRCLSQYAKSPLNGPQHLAQHALSVSLSRALHTKGYLLEVAKELQAIKSNKKEYLTVQDCVNQISDSVEQISQAMKELRSFNKHDSSMNDNMLWHISNVETWVSTALTDASSCVYSFPGNRMSKRVAAIKVKAKNVAEVTSNALFLFHRYASTYQKATMNTSNS* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1209 219 CDD PMEI-like_3 44 207 - -
Vra9g1209 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 205 IPR035513 -
Vra9g1209 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 204 IPR006501 GO:0004857
Vra9g1209 219 SMART PMEI_2 37 201 IPR006501 GO:0004857
Vra9g1209 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 209 - -
Vra9g1209 219 PANTHER BNAANNG18590D PROTEIN 3 209 - -
Vra9g1209 219 Pfam Plant invertase/pectin methylesterase inhibitor 41 199 IPR006501 GO:0004857
Vra9g1209 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 205 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1209 Vra-Chr9 18185381 18186283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1209 32 218 Carbohydrate Esterase AT3G14310 21.244 2.99e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1209 - - gmx:100791798 329.717