Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1208 ATGGCAGAACTCAACTATACATTGCTTGTGATCTTCCTCTCTTTCTTCTTCTCATTTCTTGCCACCCCAGTTGAGCCTTCATCATTGACAAGGCACAGAAACCCTAAGGCGATGACCTACATAGAGTCCTCTTGCAAAGGCACCCTCTACCCTGATCTCTGCATCCGTTGCCTTTCCCAATATGCTAAATCCCCCTTAAATGGCCCACAACACTTGGCACAATATGCCCTGTCAGAGAGCCTCTCTAGGGCACTGCGCACAAAAGGGTACCTTTTGGAAGTGGCAAAGGAGCTCCAAGCCGTGAAGAGCAACAAAAAAGAGTACCTAACAGTGCAAGACTGTGTGAACCAAATCAGTGATAGTGTGGAACAAATTAGCCAAGCCATGAAAGAACTGCGTAGCTTCAACAAACATGATTCAAGCATGAATGATAACATGTTGTGGCACATAAGCAATGTTGAGACATGGGTGAGCACAGCTTTGACAGATGCCAGTAGTTGTGTGTACTCATTTCCTGGGAATAGAATGAGTAAGAGAGTNGCTGCTATTAAGGTTAAGGCTAAGAATGTTGCAGAAGTTACAAGTAATGCTCTTTTCTTGTTTCATAGATATGCATCTACATACCAGAAAGCAGCAACTAAAATCAGCAAGAAGCCCTAG 660 0.4394 MAELNYTLLVIFLSFFFSFLATPVEPSSLTRHRNPKAMTYIESSCKGTLYPDLCIRCLSQYAKSPLNGPQHLAQYALSESLSRALRTKGYLLEVAKELQAVKSNKKEYLTVQDCVNQISDSVEQISQAMKELRSFNKHDSSMNDNMLWHISNVETWVSTALTDASSCVYSFPGNRMSKRVAAIKVKAKNVAEVTSNALFLFHRYASTYQKAATKISKKP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1208 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 204 IPR035513 -
Vra9g1208 219 PANTHER BNAANNG18590D PROTEIN 2 208 - -
Vra9g1208 219 Pfam Plant invertase/pectin methylesterase inhibitor 40 198 IPR006501 GO:0004857
Vra9g1208 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 208 - -
Vra9g1208 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 203 IPR006501 GO:0004857
Vra9g1208 219 CDD PMEI-like_3 43 206 - -
Vra9g1208 219 SMART PMEI_2 36 200 IPR006501 GO:0004857
Vra9g1208 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1208 Vra-Chr9 18181167 18182072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1208 41 207 Carbohydrate Esterase AT1G53830 21.765 7.30e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1208 - - gmx:100791798 334.724