Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1191 ATGAGAAAGAAGCCGAAGCAGCGCCCTACACCGGTGGAAGATCCTTCAACTGCTTCCTCCTCCGAACCAGAGGAAGATGATGACCGACCGCATTCTTCTCAACAGCATGCAGCAGCAGCAGCACAGGTTTCTTCCTCTGAAGAGGAAGACGATTCTTCAGAAGAAGACGAGAAGCAACGTTCCACTCTCCCTGCTTCTGCAAACCATTCCTCCAAGCCTCACCCCAAGTCCTCCTCCTCTGAATCCGAATCTGACTCCGAACCAGCTCGAGCCAAACCCAAACCCAAGCCCACGGATCTACCCCAGCCCAAGGTCCAGGCCCAGCGTTCCTCCACGCCGGTGAAGCTGGGATCCAAGCGCCCGGCCCACGCAACTGAGTCGACTGAGCCGAAACGCACGAAAAAGAAACCAGCTGAGGCTCCTTCTCCTTCCGTTGCTAACGACAAAACGGAGGAGGACGGGACCGGCGGGCAAGCGAAGGTGTTGTTCCAGAGGATCTGGAGCGCAGAAGACGAGCTCAGCATTCTAAAGGGCATACCTGAGTTCATCTCAAAGACCGGACAAGAGCCTTATTGGCATATCGACGCTTTCCACAACTTCATTAAGAAGTCACTCCACGTGGAGGTTTCCAGCCATCAGCTGAAGGATAAGATTCGACGGTTGAAGAAGAAGTTCGAGACTTATGAGGCGAAAAAGAAGAAAGGAATTCTGCCTCGGTTGAGGTTTCACGACGGGGTCTTGTATGCACAATCCAAAAAGATTTGGGGTGAACGGGCCACCGAACTGGTGGAAAAGCCCAAGCCTCTTGCGAAAACCAAGACTCAAAAGAAGGAATCAGAAGCCAAGGCTAAAGTTCCGACTCAAAAGAAGGAATCAGAAGCCAAGACTAAAGTTCCGGGGCAGCCATCAGCGTCTGAAAGCGGTGACGTTAGTTTGCTTTACAGCAATATTTCTTGTTTTAAAGAGCTGGATGAGGATGAGATGAAGAGAGGACTCACTTTGATTGAAGAATCCAAGAGGAAGGAATTAGAGAGAAGATGGAAAGTGTTGCAATATTCTGAGATGGAACTACTTGTTAATCGCTCTCTGTTGATTGGGGAGCAGATTAAGTTGATATCTGAAGCCCTACAGTCATCCAACAATTAG 1146 0.5009 MRKKPKQRPTPVEDPSTASSSEPEEDDDRPHSSQQHAAAAAQVSSSEEEDDSSEEDEKQRSTLPASANHSSKPHPKSSSSESESDSEPARAKPKPKPTDLPQPKVQAQRSSTPVKLGSKRPAHATESTEPKRTKKKPAEAPSPSVANDKTEEDGTGGQAKVLFQRIWSAEDELSILKGIPEFISKTGQEPYWHIDAFHNFIKKSLHVEVSSHQLKDKIRRLKKKFETYEAKKKKGILPRLRFHDGVLYAQSKKIWGERATELVEKPKPLAKTKTQKKESEAKAKVPTQKKESEAKTKVPGQPSASESGDVSLLYSNISCFKELDEDEMKRGLTLIEESKRKELERRWKVLQYSEMELLVNRSLLIGEQIKLISEALQSSNN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1191 381 PANTHER BNAANNG10740D PROTEIN-RELATED 36 378 IPR007592 GO:0006355
Vra9g1191 381 Pfam Protein of unknown function, DUF573 163 256 IPR007592 GO:0006355
Vra9g1191 381 PANTHER STOREKEEPER PROTEIN 36 378 - -
Vra9g1191 381 MobiDBLite consensus disorder prediction 266 307 - -
Vra9g1191 381 MobiDBLite consensus disorder prediction 122 138 - -
Vra9g1191 381 MobiDBLite consensus disorder prediction 266 296 - -
Vra9g1191 381 Coils Coil 211 231 - -
Vra9g1191 381 MobiDBLite consensus disorder prediction 76 94 - -
Vra9g1191 381 MobiDBLite consensus disorder prediction 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1191 Vra-Chr9 17578552 17580160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1191 114 375 GeBP Transcription Factor Family AT1G61730 30.627 7.44e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vra9g1191 DUF573 1.1e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1191 - - vun:114182157 451.825