Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1133 ATGGTGAGCATTGTATCTGATTTGGCAAAGTCAACTCTGGAGAAATTGATTAATGCAACAATAGAAGAATCACGTTATATTTGTTGCTTCACATGCATTACTGATGACTTTGAAAAGGAAAAGGAAAATTTGAAAGCAAAAAAGGAAACATGGGAAGAGTATGCTCGAGTGGCAACTAGAAGAGGTGATAACATACGAAAAGATGTCACACATTGGCAAAAGCAAGCTAAAGAACTTATTGAAGAAGACACCAAAATGAAAGTGAAGTGCTTTTTTGGATGGTGTCCTAACTGTATATGGCAATATAGTAGGGGGAAGGAATTGGAAAGCAAGACAGAGAAGATTAAAAAACTGATGGAATGCAACTTTGAAAATGTTGGAATCACTCGTGATGTTCCTGACATTGAATATCACTCTTCACAAAATTACGTTTCTTTCAAAAGTAGAAAGTTGAAATTTGAAGAACTTTTTAATGCCTTGAAAGATGACAACAACTATATGATTGGATTGCAAGGGATGGGGGGCATAGGTAAAACAACATTAGCAAAAGAGGTGGGTAAGGAGCTTAAGAAGTCAAAATGTTTTAATCAAGTTATTGATACTACAATATCAAATTCCCCTTATATAAAAAGGATTCAAGATGAGATTGCAGGACCGTTAGGATTGTCATTCGAGAATTGTACTGAATCAGAGAGGGCTAGAAAGTTGATGGGTAGATTAACCAATGCTGACAAAATTCTTCTAATTCTAGATGATGTGTGGGGAAATATCAGTTTTGGAGAAATAGGTATTCCATTTAAGGACAACCACAATAATTGTAAAATTCTTGTGACCACTCGCTATATAAGAGCATGCAACGAAATAGGATGTGAGAAGATAATTCAACTTGATATCTTACCAGAGGAAGAAGGATGGATATTGTTCCAAAAGTATGCTGGTTTAAGTGATAATTCCTCTAAAAGTATTCTTTATAAAGGTCGCAAAATTTCAAAAGAGTGTAAAGGATTGCCAATTGCAATTGAAATTATTGCCAGTAGTTTAAAGGGCACACTACCTCTGGAAGAATGGGATTTAGCCTTAAAATCCTTGCAGAAGTCCATGCACGTACACTATGATGATGAAAGTTTGAGAAAAATTTATACATGTCTAAAGTATAGTTATGACAATATGAAAGATCAAACAACCAAGAAATTGTTCCTTTTATGTTCTATGTTTCGAGAAGATGAAGAAATATCTGAAGAACTTTTAGTCAGACTTGCTAAAGGGGCAACTCTCATTGAGAAAATTGATGACGATGACAGTTACGACGAATGTGGTAAGAAAGTTATTGTGGCAAAATATAAACTGATAGATTCATGTTTACTATTGAATTGTAAATCTGGAAGAGTAAAAATGCATGACTTGGTTCGTGAAATGGCATTGTGGATAGTTAACGAGGAGATTGTGGCAGTGAATACATCTAAGAAGAATGAAATGACAATGGTTGAAAAGGGGAAGGATATTAAATATTTATTATGTGAAGGAAAAATCAGTGATTTGTTTTCCTCCAAGTTTGATGGATCTAAACTTGATATTCTTATTGTCAACATGAATGACCATGGTCCTGTGGAAGTCCCAAATTCATTCTTTGAAAACATACCAGGGCTTCAAGTTTTGATTTTATCAAATAATCGATATAAGAGAGCAATTTTATCATTGCCTCAGTCAATTCAATTGTTGACCAATATCAAATCTTTATACCTCAAACAATTCTCATTAGGTGACATCTCGATTCTTGGAAACCTACAGACCCTTGAGACTGTCGAGTTTGTTAAATGTGGAATGGATGAATTGCCTAGGGAGATTGGAAAATTGGTGAAACTTAAATTATTGAAGTTGAATTATTGTCGTTTTGAAAGGAGCAATGTATTTGAAGTGATTAAAAGTTATTCTTCATTGGAAGAGTTGCATTTAGTAACCACTTATGATAATAAAATTTTTAAAGATTGCCATCTAGAGCTTCCTAACTATCAAAGGTTTTGTATAGGGGAACATTTCCGGGACATATACCCTGAATGGTTTTTAAGGAATTCCCTGGATGTGGATAATGCTATGGAAATTTTTTCTGAGGAGACATTGAAGAATCTAGTGCAAAAAGCAGAAATTCTTAGATTAAGGGGACCTATAGGAGTATGGAAAAATCTCATACCTGATATTATTTTTCCTGAAGATGAATCTACGAATAATCTAATGGAGATTGCTTTGGAAGATAATTCAGAACTCACATGCCTAATTGACAATAATGATTCTCTTGTGCAAAGTGCCTTATCCAGGTTGGTTACGCTTGAACTTGAAGGAATGAAAAATTTGAAAGAAATATGCAATGGACCCCTTCCCTCTGAATTTCTAAAAAATTTAGAAACATTCCATCTAAATGATTGCATACATTTGCAAGGTGCATTGTTTAAGAGCAAGATCTCCCTCTGCAATCTTAAAACCTTGTCTATCCGGAGCTGTCCAATGTTGACATCTCTTTTTGAGTTGTCGACCACACAAAGCCTATTGTCGTTGGAGACATTGCACATAATGTCTTGTGAACAATTGAAAAGTATAATAAGAGATGAAAACAAATGGAAAGATTCTGGAGAAGAAATAGTTGATACTCATAATAATAACAAGAGTACTATTTCAATATTTCCAAATTTAACCACTCTTTATGTCTACGAGTGTCGCCTGTTACACTTTGTACTTCCGGTGACTCAAAAAATTCCAAAACTTGAAAGTATTACAATACGCAACTGTGATGGGTTAAAATACTTATTTGGCCGATACCAACATGAGCATGAAGAGGAAGATTTACACCAAGAATTAAAAGACGTCATATTCACATCTCTAAAATATGTTTATCTAGATAACTTGCCTAATTTTGTGGACATTTTTCAAAAATGTGATGAGTCCTTCTGTTCTTTGAAGAAGTCAACTTCCAAAGATGAGACCAAAGGAAAAATAGAATCAAAGTCCAGAAAATATAAGGTTTTACATTGGACCCATAAATATAAAAGTAAATGGAGAACTACCAAAATTCCTTACGATTCCAAGGATCAATTGCAAGACTCTTCTCTCTCAATGGTAAATGAGGCCCATGCAAATGATGTTATTGCACAATACATGAGAGTGGAACTGGAAAATATGTCATTGAATGATACATCCAAGATTCTTTTTACTCTACAAAACGTTACTGAGTTACATATTAATAGGTGCACTTAG 3246 0.3417 MVSIVSDLAKSTLEKLINATIEESRYICCFTCITDDFEKEKENLKAKKETWEEYARVATRRGDNIRKDVTHWQKQAKELIEEDTKMKVKCFFGWCPNCIWQYSRGKELESKTEKIKKLMECNFENVGITRDVPDIEYHSSQNYVSFKSRKLKFEELFNALKDDNNYMIGLQGMGGIGKTTLAKEVGKELKKSKCFNQVIDTTISNSPYIKRIQDEIAGPLGLSFENCTESERARKLMGRLTNADKILLILDDVWGNISFGEIGIPFKDNHNNCKILVTTRYIRACNEIGCEKIIQLDILPEEEGWILFQKYAGLSDNSSKSILYKGRKISKECKGLPIAIEIIASSLKGTLPLEEWDLALKSLQKSMHVHYDDESLRKIYTCLKYSYDNMKDQTTKKLFLLCSMFREDEEISEELLVRLAKGATLIEKIDDDDSYDECGKKVIVAKYKLIDSCLLLNCKSGRVKMHDLVREMALWIVNEEIVAVNTSKKNEMTMVEKGKDIKYLLCEGKISDLFSSKFDGSKLDILIVNMNDHGPVEVPNSFFENIPGLQVLILSNNRYKRAILSLPQSIQLLTNIKSLYLKQFSLGDISILGNLQTLETVEFVKCGMDELPREIGKLVKLKLLKLNYCRFERSNVFEVIKSYSSLEELHLVTTYDNKIFKDCHLELPNYQRFCIGEHFRDIYPEWFLRNSLDVDNAMEIFSEETLKNLVQKAEILRLRGPIGVWKNLIPDIIFPEDESTNNLMEIALEDNSELTCLIDNNDSLVQSALSRLVTLELEGMKNLKEICNGPLPSEFLKNLETFHLNDCIHLQGALFKSKISLCNLKTLSIRSCPMLTSLFELSTTQSLLSLETLHIMSCEQLKSIIRDENKWKDSGEEIVDTHNNNKSTISIFPNLTTLYVYECRLLHFVLPVTQKIPKLESITIRNCDGLKYLFGRYQHEHEEEDLHQELKDVIFTSLKYVYLDNLPNFVDIFQKCDESFCSLKKSTSKDETKGKIESKSRKYKVLHWTHKYKSKWRTTKIPYDSKDQLQDSSLSMVNEAHANDVIAQYMRVELENMSLNDTSKILFTLQNVTELHINRCT* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1133 1081 CDD AAA 170 279 - -
Vra9g1133 1081 PRINTS Disease resistance protein signature 167 182 - -
Vra9g1133 1081 PRINTS Disease resistance protein signature 240 254 - -
Vra9g1133 1081 PRINTS Disease resistance protein signature 333 347 - -
Vra9g1133 1081 PRINTS Disease resistance protein signature 767 783 - -
Vra9g1133 1081 SUPERFAMILY L domain-like 462 971 - -
Vra9g1133 1081 Pfam NB-ARC domain 154 389 IPR002182 GO:0043531
Vra9g1133 1081 Gene3D - 298 386 IPR042197 -
Vra9g1133 1081 PANTHER - 89 976 - -
Vra9g1133 1081 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 89 976 - -
Vra9g1133 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 402 IPR027417 -
Vra9g1133 1081 Gene3D - 104 294 IPR027417 -
Vra9g1133 1081 Coils Coil 34 54 - -
Vra9g1133 1081 Gene3D Ribonuclease Inhibitor 485 683 IPR032675 -
Vra9g1133 1081 Gene3D Ribonuclease Inhibitor 690 1005 IPR032675 -
Vra9g1133 1081 Gene3D - 387 474 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1133 Vra-Chr9 15323019 15336500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1133 144 505 WRKY Transcription Factor Family AT5G45050 25.134 1.01e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1133 - - vra:111242488 2122.44