Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g1109 | ATGAACGCGCTTACCCTACTCGAAAACTCGCCATTTCTCAAAACGAACGGAGCAAGAACCAAGAGATGCAATGACAGCGACAACCACACCGACAACGACAACGAAGGCGAACAGGGTAAGGAGAAGGACCAACGAGAGTTAGATGGCGAACACAAAGTTATTAAACAAAAACCAAACAGTTATATATACGATGTGCTCATCAACTTCACCGGAGAAGACATCCACAGATTATTTGTTTCTCATCTCAATTCTGTTCTCTCTACTGTTGGTCTCACCACTTTCCTTCATCACCACAACGCAGTAAAGTCAACTCACATCCAAGAACCTATTCTCAGCCACTGTCGTGTAGCAATTGTTGTTTTCACCCAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAGCTTCAACAAATCATCAACTGGCACGAAACTTATTTCCAACATGTTCTGCCAATATATTATGAAATCCAGCCATCTGATGTACGTCTTCAAAAAGGTGACTTTGGAAAAGCCTTGGAGGAAACGGCACAACAAACATTTTCAGGACAAGAACTGGAGCATGGCATGTCCAGGTGGAGCCATGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGAGAAAATTGTTAAGAGCGTTGTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCTGTTGGATTACAATCACACGTGGAAAATCTGATTCGAACTATCAAAAATAAATCCACGGAAGTTTGTATGATATGGATACATGGAGATGAAGGATCTGGTAAAACGACTCTTGCCAAAGCGATCTACAATCAAATTCATTGGACGTTCAAGGACAAAAGTTTCATTGAAAATATTTCACGTGTTAGCGGAATAAGAGGGCTTCTTCGTTTACAAGAACAACTTCTTTTAGATGTCCTAAAACAAAAAGTGGAGATTCCTAGCGTTGATGTGGGAAGAACTATGATTCGGGAAAGACTTCTAGGAAAAAGGGTTCTCATTGTACTTGACGATCTTTTCTACTCTAATTTATTCGACCTAAGGGATTGTACTAAATGGTTAGTTGAAGGAACTGTTATAATTGTTACATCAACATATGGAATAGGGCTGAGAGATCAAGCTAATTCTGTCTTTCGGGTAGAGCGAATGAACGAAGAGGAGTCCCTTGAGCTTGTTAGTTGGCATGCATTTAGAGAAGCAAAACCAAAAGAAGAATACAAAGACCTTGCAAGAAAAGTAGTTAGTTATTGTGAAGGACTACCACTAGCTCTTGAAGTCGTTGGAAGTAGTTTATTTGAAAAGACGAAAGAAGAATGGAACAATGTATTGTTTGCGATAGATGGCTTGCGTCCTGATCCAGAGATAATAAAAGTAAGCATCGAAGGTTCACTGAATGAAATGGAAAAAGATATATTCCTTGATATATGTTGTTTCTTTGTTGGTAAGAACAGAGCCTATGTTAGGAAGATCCTAAATGGCTGTGGGGTAGACGCTGATATTGCAATAAGAGTTCTCATCCAGCATAACCTCATCAAAATTAACAAGAACAACAAATTTGGAATGCATCCTTTGCTACAAGAAATCGGATTAAGAATTATTCGTGAAAATTATGGAAAGGATCTTGGGAACAGGCGACTGTGGTTTGATAAGGATACAAAATATGGGACAGAAGCCCTGCAGTGGTTGCCTGTCAATGCCTTCGTTAATGTACAACAGACTGTAAATTCTGAGTACCTTCTCAAGAAACTAAGATGGATCAGTTGGCATGGGCTTTCTTCAGAACGTCTACCTAACAACTTTTATGAGCATGATGCAATAGCTATTGATTTAAAACGCAGTCTTCTTCGATTTCTCTGGAAAACACCCCAGGTTATGACATCNCTAAAAGTCCTTAACCTCAGTCACTCCAAGCATTTAACTACAACCCCTGACTTTACCGGATTACCAAGTCTTGAACATCTCATTTTGAAATATTGTTCGAGATTGAGCAAAGTACACCAATCTATTGGATCACTCAACAGTCTTATACTCCTAAATGTGAAATACTGTACAAGTCTATACAATCTTCCAACAGAGATATATGAGTTGAAATCTTTAAGAACCTTCATTCTCTCTGGTTGTTCCAAGATTGACATAATGGATAAAGATATAGCAAAGTTGGAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTGAAAGAAGCGCCCTTTTCAATTGTAAGCTCAAAAAGAATTGGATATATATCCCCTACGTGGATTTGA | 2289 | 0.3884 | MNALTLLENSPFLKTNGARTKRCNDSDNHTDNDNEGEQGKEKDQRELDGEHKVIKQKPNSYIYDVLINFTGEDIHRLFVSHLNSVLSTVGLTTFLHHHNAVKSTHIQEPILSHCRVAIVVFTQTYSQSAWCLHQLQQIINWHETYFQHVLPIYYEIQPSDVRLQKGDFGKALEETAQQTFSGQELEHGMSRWSHALTKAANFFGWDESNYRSDAELVEKIVKSVVNLPVLSATKFPVGLQSHVENLIRTIKNKSTEVCMIWIHGDEGSGKTTLAKAIYNQIHWTFKDKSFIENISRVSGIRGLLRLQEQLLLDVLKQKVEIPSVDVGRTMIRERLLGKRVLIVLDDLFYSNLFDLRDCTKWLVEGTVIIVTSTYGIGLRDQANSVFRVERMNEEESLELVSWHAFREAKPKEEYKDLARKVVSYCEGLPLALEVVGSSLFEKTKEEWNNVLFAIDGLRPDPEIIKVSIEGSLNEMEKDIFLDICCFFVGKNRAYVRKILNGCGVDADIAIRVLIQHNLIKINKNNKFGMHPLLQEIGLRIIRENYGKDLGNRRLWFDKDTKYGTEALQWLPVNAFVNVQQTVNSEYLLKKLRWISWHGLSSERLPNNFYEHDAIAIDLKRSLLRFLWKTPQVMTSLKVLNLSHSKHLTTTPDFTGLPSLEHLILKYCSRLSKVHQSIGSLNSLILLNVKYCTSLYNLPTEIYELKSLRTFILSGCSKIDIMDKDIAKLESLITLIAENTAVKEAPFSIVSSKRIGYISPTWI* | 763 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g1109 | 762 | Gene3D | Ribonuclease Inhibitor | 564 | 750 | IPR032675 | - | |
Vra9g1109 | 762 | PRINTS | Disease resistance protein signature | 259 | 274 | - | - | |
Vra9g1109 | 762 | PRINTS | Disease resistance protein signature | 334 | 348 | - | - | |
Vra9g1109 | 762 | PRINTS | Disease resistance protein signature | 425 | 439 | - | - | |
Vra9g1109 | 762 | PRINTS | Disease resistance protein signature | 631 | 647 | - | - | |
Vra9g1109 | 762 | SMART | till_3 | 62 | 202 | IPR000157 | GO:0007165 | |
Vra9g1109 | 762 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 66 | 759 | - | - | |
Vra9g1109 | 762 | MobiDBLite | consensus disorder prediction | 16 | 49 | - | - | |
Vra9g1109 | 762 | MobiDBLite | consensus disorder prediction | 20 | 49 | - | - | |
Vra9g1109 | 762 | Pfam | NB-ARC domain | 240 | 451 | IPR002182 | GO:0043531 | |
Vra9g1109 | 762 | SUPERFAMILY | L domain-like | 582 | 747 | - | - | |
Vra9g1109 | 762 | SUPERFAMILY | "Winged helix" DNA-binding domain | 462 | 559 | IPR036390 | - | |
Vra9g1109 | 762 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 58 | 205 | IPR035897 | - | |
Vra9g1109 | 762 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 66 | 759 | IPR044974 | GO:0006952 | |
Vra9g1109 | 762 | Gene3D | - | 390 | 467 | IPR042197 | - | |
Vra9g1109 | 762 | Gene3D | - | 57 | 224 | IPR035897 | - | |
Vra9g1109 | 762 | Gene3D | - | 225 | 379 | IPR027417 | - | |
Vra9g1109 | 762 | ProSiteProfiles | TIR domain profile. | 61 | 228 | IPR000157 | GO:0007165 | |
Vra9g1109 | 762 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 220 | 482 | IPR027417 | - | |
Vra9g1109 | 762 | Pfam | TIR domain | 63 | 234 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g1109 | Vra-Chr9 | 14270995 | 14276982 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g1109 | 51 | 748 | WRKY Transcription Factor Family | AT4G12020 | 27.477 | 9.11e-59 | 215 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g1109 | - | - | var:108346736 | 956.436 |