Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1105 ATGGTGAGCATTGTATCTGATTTGGCAAAGTCAACTCTGGAGAAATTGATTAACGCAACAATAGAAGAATCACGTTATATTTGTTGCTTCACATGCATTACTGATGACTTTGAAAAGGAAAGGGAAAATTTGATAGCAAAAAAGGAAACATGGGAAGAGTATGCTAGAGTGGTAACTAGAAGAGGTGATAACATACGAAAAGATGTCACACATTGGCAAAAGCAAGCTAAAGAACTTATTGAAGAAGACACCAAAATGAAAGTGAAGTGTTTTTTTGGATGGTGTCCTAACTGTATATGGCAATATAGTAGGGGGAAGGAATTGGAAAGCAAGACAGAGAAGATTAAAAAACTGATGGAATGCAACTTTGAAAATGTTGGAATCACTCGTGATGTTCCTGACATTGAATATCACTCTTCTCAAAATTACATTTCTTTCAAAAGTAGAAAGTTGAAATTTGAAGAACTTTTTAATGCCTTGAAAGATGACAACAACTATATGGTTGGATTGCAAGGGATGGGGGGCACAGGAAAAACAACATTAGCAAAAGAGGTGGGTAAGGAGCTGAAGAAGTCAAAATGTTTTAATCAAGTAATTGATACTACAATATCTAATACCCCTGATATAAAAAAGATTCAAGATGATATTGCAGGACCATTAGGACTGTCATTGAAGGGTTATACAGAATCAGAGAGGCCTAGAAAGTTGATGGATAGATTAACCAATGGTGACAAAATTCTTGTAATCCTAGATGATGTGTGGGGGGATATCAGTTTTGAAGAAATAGGTATTCCATTTAAGGACAACCACAAGAATTGTAGAATTCTTGTGACCACTCGCGATATAAGAGTATGCAACAAAATGGAATGTGAGAAGATAATTCAACTTGATATCTTACCAGAGGAAGAAGGATGGATATTGTTCCAAAAGCATGCTGCTTTAAGTGATAAATCCTCTAAAAGTATTCTTGATATTGGTCGCAAAATTTCCAAAGAATGTAAAGGATTGCCAATTGCAATTGTTGTTATTGCTCGTAGTTTAAAGGGCCAAACACGTAAAAAAGAATGGGATTTAGCCTTAAAATCCTTACAAAAGTCCATGCACATACCTGGTGATGATGAAAATTGGAGTGAAGTTTATACTTGTTTAAAGTATAGCTATGATAATATGAAGAATAAAACAGCTAAGAATTTGTTCCTTCTGTGTTCCTTGTTTCGAGAAGATGAAGAAATACCTGAAGAACTTTTAGTCAGGCTTGCCATTGGAGCAGGTCTCGTCGAGCAAATTGATGTTGATTACAATTACGATGTATATCGTAATGAAGTTATTGTAGCAAAATACAAACTCATAGATTCATGTTTATTATTGAATGAAGAATTTGAAAGTGTAAAAATGCATGATTTGGTTCGTGAAATGGCTCTATCGATAGCTAACAAGGAGATTGTGGCAGTGAAGACATCTAACAAGAATGCAATGACAATGGTTGAAAAGGGGAAGAATATTAAATATTTGTTATGCGAAGGTAAGAGCAAAGATCTATCTTCCTTGAAGTTTGATGGATCTAAACTTGATATTCTAATTATCTATCTGAATGAAATGGAAGATTATTATGTCAAAGTCCCAGATCCATTCTTTGAAAATGTATCAAGAATCCGAGTTTTGTATTTATCAAACAATACTTATAAAGAATCAACGATGTCATTACCACGATCAATTCAATTGCTAACCAATCTTCGATCTTTACTCCTTGAAAGTTTCACCTTAGGTGACATCTCTATTCTTGGAAAACTACAAGGCCTTGAGACTCTCGAGTTAGTGAAATGTTGGTTAGTTGAATTGCCGAGAGAGATTGCAAAATTGGGAAAACTTCAATTGTTGAAATTGAATGATTGTATGTTCAAACGGAACAATTCATTTGAAGTGATTGAAAGTTGCAGTTCATTAGAAGAGTTGTATCTCATTCATGAAGGCATTTCAAAAACTTCTCATAAAGTACATCTTCCTAACTATCAAAGGTTTTGTATATTAGACTTTTCTTGCTTCTTCATGACGAAGGAATTTTTTGCAAGAAATTCCTTGAATATGTTCATGGCTGATGAAGTTTTCTCTAAAGAGACATTCAAGAATCTAGTGCAAAAAGCAGAAATTCTATGTTTAAATGGACTTGAAGGAGTATGGAAAAGTCTCATACCTGACATTATATTTCCAGATGATGATGAAGTGGACCCCTTCCCTTTGAATTTCTGA 2247 0.3427 MVSIVSDLAKSTLEKLINATIEESRYICCFTCITDDFEKERENLIAKKETWEEYARVVTRRGDNIRKDVTHWQKQAKELIEEDTKMKVKCFFGWCPNCIWQYSRGKELESKTEKIKKLMECNFENVGITRDVPDIEYHSSQNYISFKSRKLKFEELFNALKDDNNYMVGLQGMGGTGKTTLAKEVGKELKKSKCFNQVIDTTISNTPDIKKIQDDIAGPLGLSLKGYTESERPRKLMDRLTNGDKILVILDDVWGDISFEEIGIPFKDNHKNCRILVTTRDIRVCNKMECEKIIQLDILPEEEGWILFQKHAALSDKSSKSILDIGRKISKECKGLPIAIVVIARSLKGQTRKKEWDLALKSLQKSMHIPGDDENWSEVYTCLKYSYDNMKNKTAKNLFLLCSLFREDEEIPEELLVRLAIGAGLVEQIDVDYNYDVYRNEVIVAKYKLIDSCLLLNEEFESVKMHDLVREMALSIANKEIVAVKTSNKNAMTMVEKGKNIKYLLCEGKSKDLSSLKFDGSKLDILIIYLNEMEDYYVKVPDPFFENVSRIRVLYLSNNTYKESTMSLPRSIQLLTNLRSLLLESFTLGDISILGKLQGLETLELVKCWLVELPREIAKLGKLQLLKLNDCMFKRNNSFEVIESCSSLEELYLIHEGISKTSHKVHLPNYQRFCILDFSCFFMTKEFFARNSLNMFMADEVFSKETFKNLVQKAEILCLNGLEGVWKSLIPDIIFPDDDEVDPFPLNF* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1105 748 CDD AAA 170 279 - -
Vra9g1105 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 402 IPR027417 -
Vra9g1105 748 Pfam NB-ARC domain 153 389 IPR002182 GO:0043531
Vra9g1105 748 Gene3D - 387 474 IPR036388 -
Vra9g1105 748 PANTHER - 25 653 - -
Vra9g1105 748 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 25 653 - -
Vra9g1105 748 Gene3D Ribonuclease Inhibitor 475 711 IPR032675 -
Vra9g1105 748 PRINTS Disease resistance protein signature 167 182 - -
Vra9g1105 748 PRINTS Disease resistance protein signature 240 254 - -
Vra9g1105 748 PRINTS Disease resistance protein signature 333 347 - -
Vra9g1105 748 PRINTS Disease resistance protein signature 618 634 - -
Vra9g1105 748 SUPERFAMILY L domain-like 464 684 - -
Vra9g1105 748 Gene3D - 96 295 IPR027417 -
Vra9g1105 748 Gene3D - 298 386 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1105 Vra-Chr9 14236339 14242040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1105 144 671 WRKY Transcription Factor Family AT5G45050 24.662 2.51e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1105 - - var:108346730 1375.92