Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1104 ATGGTGAGCATTGTATCTGATTTGGCAAAGTCAAATTTGGAGAAATTGATTAATGCAACAATAGAACAATCACGTTATATTTGTTGCTTCACATGCATTACTGATGACTTTGAAAAGGAAAGGGAAAATTTGATAGCAAAAAAGGAAACATGGGAAGAGTATGCTATAGTGGCAACTAGAAAAGGTGATAACATAAGAAAAGATGTCACACATTGGCAAAAGCAAGCTAAAGAACTTATTGGAGAAGACACCAAAATGAAAGTGACATGTTTCTTAGGATGGTGTCCTAACTGCAAATGGCAATATAGCAGGGGGAAGGAATTGGAAAGTAAGACAAAAGAGATCAGAAGACTTGTTGAACGCAACTTTGAAAATGTTGGAATCAGTCGTGATGTTCCTGACATCGAATATCACTCTTCTCAAAATTACATTTCTTTCGAAAGTAGAAAGTTGAAATTTGAAGAACTTTTTAATGCCTTGAAAGATGACAACAACTATATGATTGGATTGCAAGGGATGGGGGGCACAGGAAAAACAACATTAGCAAAAGAGGTGGGTAAGGAGCTTAAGAAGTCAAAATGTTTTAATCAAGTAATTGATACTACAATATCTAATACCCCTGATATGAAAAAGATTCAAGATGATATTGCAGGACCATTGGGACTGTCATTGAAGGATTTTACCGAATCAGAGAGGCCTAAAAAGTTGAAGGATAGATTAACCAATGGGGAAAACATTCTTCTAATTCTAGATGATGTGTGGGGAGATATCAATTTTGAAGAAATAGGTATTCCATTTAAGGACGACCATAACAATTGTAGAATTCTTGTAACAACCCGCAATATGAAGATATGCCAACAAATGGAATGTGACAAGACAATTGAACTTCATATCTTACCTGAGAAAGAGGGATGGATATTGTTCCAAAAGTATGCTGGTTTAAGTGATAATTCCTCTAAAAGTATTCTTGATAAAGGTCGCAAAATTTCTAAAGAGTGTAAAGGATTACCAATTGCAATTGCTGTTATTGCTCGTAGTTTAAAGGGTCCACGACCTCTGGAAGAATGGGATGTAGCCTTAAAATCCTTGCAAAAGTCCATGCACATACATGATGATGAAGATGAAAGTTGGAGAAAAGTGTATACATGTCTAAAGTATAGTTATGACAATATGAAGGATGAAACAGCCAAGAAATTGTTCCTTTTATGTTCTTTGTTTAGAGAAGATGAAGAAATATCTGAAGAACTTTTAGTCAGACTTGCTAAAGGAGCAAATCTCATTGAGAAAATTGATGAGGATTACAGTTACGATGAATGTCGTAAGAAAGTTATTGTAGCAAAATATAAACTCACAGATTCATGTTTACTATTAAACTGTGAATCTGGAGGTGTAAAAATGCATGACTTGGTTCGTGAAATGGCTTTGTTGATAGCTAACAAGGAGATTGTGGCAGTGAATACATCTAAGAAGAATGAAATGACAATGGTAGAAAAGGGAAAGAATATTAAATATTTATTATGTGAAGGAAAAATCAATGATTTGTTTTCCTCCAAGTTTAATGGATCTAAACTTGATATTCTTATTGTGTACATGAATGACGATGGTATTGTGGAAGTCCCAAATTCATTCTTTGAAAACATACCAGGGCTTCAAGTTTTGATTTTATCAAATAATCAAAATAAGAAACCAATTTTATCATTGCCTCAGTCAATTAAATTGTTGACCAATATCAAATCTTTATACCTCAAACATTTCTCATTAGGTAACAGCTCGATTCTTGGAAACCTACAGGGCCTTGAGACTCTCGAGTTGGTTGCATGTAAGATGTATGAACTGCCTAGGGAGATTGGAAAACTGGTGAATCTTAAATTATTGAAGTTGAATTATTGTCGTTTTGAAATGAGCAATGTATTTAAAGTGATTAAAAGTTGTTCTTCATTGGAAGAGTTGCATTTAGTAACCACTTATGATAATAAAATTTTTAAAGATTGCCATCTAGAGCTTCCTAACTATCAAAGGTTTTGTATAGGGGAACATGATGATTGGTTCCGGGCCAAATACCCTGAATGGTTTTTAAGGAATTCCCTGGATGTGGATAACGCTATGGAATTTTTTTCTGAGGAAACATTGAAGAATCTAGTGCAAAAAGCAGAAATTCTTAGATTAAGGGGACCTATAGGAGTATGGAAAAATCTCATACCTGATATTATTTTTCCTGAAGATGAATCTACGAGTAATCTAATGGAGATTTCTTTGGAAGATAATTCAGAACTCACATGCCTAATTGACAATAATGATTCTCTTGTGCAAGAAAGTGCCTTATCCAGGTTGGTTACGCTTAAACTTGAAGGAATGAAAAATTTGAAAGAAATATGCAATGGACCCCTTCCCTCTGAACTGCTAAAATATTTAGAAACAATCAGTCTAGATAATTGCAATCATCTTCAAGGCGCATTGTTTAAGAGCAAGATCTCCCTCTGCAATCTTAAAGACTTGTCTATCTGCTATTGTCCAATGTTGACATGTCTTTTTGAGTTGTCAACGACACAAAGCCTATTGTCGTTGGAGAAATTGTCGATAGTGTCTTGTGAACAATTGAAAAGTATAATAAGAGATGAAAACAAATGGAAAGATTCTAGAGAAGAAATAATTGATACTCATAATAATAACAAGAGTACTATTTCAATATTTCCAAATTTAACCACTCTTCTTGTCCAAAGGTGTCACCTGTTACACTTTGTACTTCCGGTTACTCAAAAAATTCCAAAACTTGAAGATATTACAATAGTCAACTGTGATCGGTTAAAATACTTATTTGGCCGATACCAACATGAGCATGAAGAGGAAGATTTACACCAAGAATTAAAAGACGTCATATTCACATCTCCAAAACATGTTTATCTACATATCTTGCCTAATTTTGTGGACATTTTTAAAAAATGTGATGAGTCCTTCATTTCATCGAAGAAGTCAACTTCCAAAGATGAGACCAAAGGAAAAATAGAATCAAAGTCCATAAAATGTAAGGTTTTACATTGGACCCATAAATATAAAAACAAATGGAGAACTACCAAAATTCCTTTCGATTCCAAGGATCAATTGCGAGACTCTTCTCTCTCAATGGTAAATGAGCCCAATGCAAATGATGTGATTGCACAAGACATGAGAGTGAGACTGGAAAATATGTCATTGAATGATACATCCAAGATTCTTTTTACTCTACAAAACGTTACTGAGTTACATATTGAGAGGTGTGAAAAAGTTGAAGTATTATTTTGTGCTTCTATGCTGGAATGTTTACCATATTTAGGTGCACTTCACATCTATAGATGCAATGAATTAAAGCAGATAATTGGTGAGGATGCAAAGAATCAGAGAAAGCCATTTTTCCCAAGGCTGAAAGCAGTTATCATAAGAGAATGCAACAAATTGAAATGCATCTTTCCCATTTCAACTTCCGAAATGGTACCCATGTTAGAAGCTCTGTTAATAATGGAAGCAAGTATGCTAGAGGAAGTATTCGAAGGAAACAGTGATGAAAAGGTTGAGATTCCAAATCTGAAAACTGCAGGCTTTGTTGAACTTCCAAGCCTTCGTCAGAAGATTGAATTTCTTACCGTAAAACATTGTTTGGTGAGGAATTGTCCAAAACTGTACTTCTCTTCATTCCCTCAAGATCTCCAACATTTTTCATATTCTATCACAGAATATTTCAAAGATATGAATCTCGAATACTCAATACCTGAAGCTCTTCGTGATCTTAAATCCGAAGAGATTCGCAATGAAGAAGACTCTGCAATTGGGACTGAAGTTGAAGCAGCATCATTCAGAGGGAGTGAGTTAACTTCATCACAGAACAATGCAAACCAATCTTCTCTTGCCAAGATTGATGAAGACAACAAACATGAGGATATAGTGAAAGAAAGCAAAGAAAGAGTAGAGGAAGAACAACAAATTGTTGTTGGAAAAGCTTCATCAATGCCAATATCACCAACAGATTTTCGTCTACATACAACACATTCACCAGAAAACGAAGAAGAAATGGCCATACCTTCTTCAAATCTTAACACAGAGCCTCCTATAACTAAAGATGTTAATGATGGAGATTTTCAGGGAACATCTATTTCAGTGGTTACCAATTCTCAAAATACTAATTCCACAGAAGCGACAGATCAAAGTATAAAGAAGATATTAACAGAGATAACAGATGATCTTGACGAAGACTCTAAAACCACAGATATTAGGAGTCAGAATGAAATGACAAAAGCAAAAGAAGACTTTTCAATTGATGCTAAAGCTGAGGTATTATCAGGAAGTGACTTCACTTCATCGCAGGAAACAAAGAAAACTTGTGAAGATGGAACTACATCACCGTATGAGAAGACGATAGCGTTGTCAACTGATTCAGAATCAGAACATGGTGAAGCTCAAATATCTGTACCGTTTCCAGTTGTGAATATAGAACTTGAAACCACTGAAGATGTTGGTGTTGGAGAGATTCAAGAAGCTTCTCCAGAGAAACTTGATGAGATCACTCAAGATTCAAGTTCTGGTTATACTGTAAGAAGGGAGCTTGAGGAACTTGTCTCTAAGAAGCATTTGGGGTCAGAGAACTTGGCTCTGTTAAGCAATTTCCTTGTGAAGCATCCTTCTCTTCGTTTAGCAGACGATGCCATGAGTGAGAGATACAAGGGCTTTGCCTACACTTGTCTGGCTGAGCTTTTGAAGTTTCTCCAAAGCCATAGTGTGTATGATATGTTGGGGTCAAGCCACTCTGAATTTGTTGAATTGTTAAAAGATCTTCGTAATTGTGGTTTCAATAAGGATTGGTTGGATGATGTTGAAAGACTCAAGACAGTGCTTTGA 4866 0.3529 MVSIVSDLAKSNLEKLINATIEQSRYICCFTCITDDFEKERENLIAKKETWEEYAIVATRKGDNIRKDVTHWQKQAKELIGEDTKMKVTCFLGWCPNCKWQYSRGKELESKTKEIRRLVERNFENVGISRDVPDIEYHSSQNYISFESRKLKFEELFNALKDDNNYMIGLQGMGGTGKTTLAKEVGKELKKSKCFNQVIDTTISNTPDMKKIQDDIAGPLGLSLKDFTESERPKKLKDRLTNGENILLILDDVWGDINFEEIGIPFKDDHNNCRILVTTRNMKICQQMECDKTIELHILPEKEGWILFQKYAGLSDNSSKSILDKGRKISKECKGLPIAIAVIARSLKGPRPLEEWDVALKSLQKSMHIHDDEDESWRKVYTCLKYSYDNMKDETAKKLFLLCSLFREDEEISEELLVRLAKGANLIEKIDEDYSYDECRKKVIVAKYKLTDSCLLLNCESGGVKMHDLVREMALLIANKEIVAVNTSKKNEMTMVEKGKNIKYLLCEGKINDLFSSKFNGSKLDILIVYMNDDGIVEVPNSFFENIPGLQVLILSNNQNKKPILSLPQSIKLLTNIKSLYLKHFSLGNSSILGNLQGLETLELVACKMYELPREIGKLVNLKLLKLNYCRFEMSNVFKVIKSCSSLEELHLVTTYDNKIFKDCHLELPNYQRFCIGEHDDWFRAKYPEWFLRNSLDVDNAMEFFSEETLKNLVQKAEILRLRGPIGVWKNLIPDIIFPEDESTSNLMEISLEDNSELTCLIDNNDSLVQESALSRLVTLKLEGMKNLKEICNGPLPSELLKYLETISLDNCNHLQGALFKSKISLCNLKDLSICYCPMLTCLFELSTTQSLLSLEKLSIVSCEQLKSIIRDENKWKDSREEIIDTHNNNKSTISIFPNLTTLLVQRCHLLHFVLPVTQKIPKLEDITIVNCDRLKYLFGRYQHEHEEEDLHQELKDVIFTSPKHVYLHILPNFVDIFKKCDESFISSKKSTSKDETKGKIESKSIKCKVLHWTHKYKNKWRTTKIPFDSKDQLRDSSLSMVNEPNANDVIAQDMRVRLENMSLNDTSKILFTLQNVTELHIERCEKVEVLFCASMLECLPYLGALHIYRCNELKQIIGEDAKNQRKPFFPRLKAVIIRECNKLKCIFPISTSEMVPMLEALLIMEASMLEEVFEGNSDEKVEIPNLKTAGFVELPSLRQKIEFLTVKHCLVRNCPKLYFSSFPQDLQHFSYSITEYFKDMNLEYSIPEALRDLKSEEIRNEEDSAIGTEVEAASFRGSELTSSQNNANQSSLAKIDEDNKHEDIVKESKERVEEEQQIVVGKASSMPISPTDFRLHTTHSPENEEEMAIPSSNLNTEPPITKDVNDGDFQGTSISVVTNSQNTNSTEATDQSIKKILTEITDDLDEDSKTTDIRSQNEMTKAKEDFSIDAKAEVLSGSDFTSSQETKKTCEDGTTSPYEKTIALSTDSESEHGEAQISVPFPVVNIELETTEDVGVGEIQEASPEKLDEITQDSSSGYTVRRELEELVSKKHLGSENLALLSNFLVKHPSLRLADDAMSERYKGFAYTCLAELLKFLQSHSVYDMLGSSHSEFVELLKDLRNCGFNKDWLDDVERLKTVL* 1622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1104 1621 Gene3D Ribonuclease Inhibitor 473 678 IPR032675 -
Vra9g1104 1621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 403 IPR027417 -
Vra9g1104 1621 CDD AAA 170 279 - -
Vra9g1104 1621 Gene3D - 124 295 IPR027417 -
Vra9g1104 1621 MobiDBLite consensus disorder prediction 1345 1360 - -
Vra9g1104 1621 Pfam NB-ARC domain 154 390 IPR002182 GO:0043531
Vra9g1104 1621 SUPERFAMILY RNI-like 1067 1240 - -
Vra9g1104 1621 PANTHER - 89 981 - -
Vra9g1104 1621 SUPERFAMILY L domain-like 464 939 - -
Vra9g1104 1621 Gene3D - 388 472 IPR036388 -
Vra9g1104 1621 MobiDBLite consensus disorder prediction 1277 1301 - -
Vra9g1104 1621 MobiDBLite consensus disorder prediction 1340 1360 - -
Vra9g1104 1621 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 89 981 - -
Vra9g1104 1621 MobiDBLite consensus disorder prediction 1277 1294 - -
Vra9g1104 1621 Gene3D Ribonuclease Inhibitor 773 951 IPR032675 -
Vra9g1104 1621 Gene3D Ribonuclease Inhibitor 1055 1266 IPR032675 -
Vra9g1104 1621 Gene3D - 298 387 IPR042197 -
Vra9g1104 1621 PRINTS Disease resistance protein signature 167 182 - -
Vra9g1104 1621 PRINTS Disease resistance protein signature 240 254 - -
Vra9g1104 1621 PRINTS Disease resistance protein signature 333 347 - -
Vra9g1104 1621 PRINTS Disease resistance protein signature 799 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1104 Vra-Chr9 14222448 14231925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1104 144 506 WRKY Transcription Factor Family AT5G45050 24.528 1.26e-13 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1104 - - vun:114167346 1860.88