Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1097 ATGTGCAGATACTGTGACTATACAATTCCTATGGATTCTGCTTCCTACGTTCCAACTTTCGCAGGAATCTTAGCTTTGCTAATTGCATACAAAGTGTTTAGGTTCATCAGATCTCCTAAACAAAGAAAAGGAACCAAAGTACCCGAACCTCACGGTGCTTTACCTTTGATAGGGCACCTCTACCTTCTCAATGGTAGAATACCCTATTTCAGGACCTTCTCAGCCATGGCTGAGAAATATGGTCCAGTTTTCTGTGTCAAACTGGGTTGCCACCCCACCATAGTGGTGAACAACAGGGAAATTGCCAAAGAGTGCCTCACAACAAATGACAGAGTTTTTGCCTCAAGGCCAAACACTTGTGCGGGCAGACTCATGGGTTACAACAATGCAATCTTTGCCCTTGCCCCTTACGGAAATTACTGGCGTGAGATCAGAAAAATGGCTGTTCTAGAGATTTTGTCAAGCCACAGGCTTGAGAAGCTGAAGCATGTCAGAGACAGTGAAACACTGTCTCTTGTGAAGGACTTGTACTCATCAATGACAGTGTCCTCTGCAAAGAACGTGAAGGGCTCAACTGAAGTGGCTATAAGCGATCTGTTAGAGCACATGACCTTCAACATAATTGTGAGGATGATTGCTGGGAAGAGATTTGGAGGGGACACTTCCAACGAAGAAGATAATGAAGCATGGAAGCTGAGAAAGGCCATTAAAGATGCCACATATCTGTCTGGTGTTTTTGTTGTGGCTGATGCAATTCCATCACTCAGTTGGTTTGATTTCCAAGGACATTTAAGTTTCATGAAAAGAACAGCTATGAAACTAGACAGTATCCTTGAGAGATGGCTTCAAGAACATGTGAAAATGAGAGGAGAGAAGAAGAATGGTGGATGTGAAAAGGACTTCATGGATGTGATGTTATCATCTTTTCAAGAAGAAAATATTTGTGGCTATAAACGGGACATAGTTATCAAAGCAACATCACTGATCCTTGTCCTTACTGGCTCTGAAAGCACAGCGATAACCCTAACATGGGCACTGTCCTTGCTCGTAAACCATCCAAAGATTCTAAAGGCAGCCTTACAAGAGTTGGACACCCACGTAGGAAAAGAAAGATGGGTGGAAGAATCTGACATAAAAAAGCTCAAATATCTGGATGCCATTATCAAAGAGACCCTTCGTTTGTACCCGCCAGCACCCTTAACAGGAATCAGGGAGGCAATGGAAGATTGCTCTTTGGTAGGGTATGATGTCCCAAAGGGAACACGATTGCTTATTAATCTGTGGAACTTGCAAAGGGACCCAGAAGTATGGCCTAACCCTAATGAGTTTGAGCCAGAGAGGTTCCTCACCACTCACAGAGACATTGATTTTATGAGTCAGGACTTTGAGTTGATTCCATTTAGCTTTGGAAGAAGGTCGTGCCCTGGCATGTCCTTTGGCCTGCAAGTCACGCACTTGACCTTGGCTCGCTTGCTTCAAGGCTTTCATATTTTCACAAAGGATGGTGCTCACGTTGATATGACTGAAGGGTTAGGAGTCGCTTTGCCTAAGCAACAACAACTTCGACTTATTCTCCAACCTCGTCTTCCATTGGAGCTTTATGAAAACCTTTGA 1614 0.4374 MCRYCDYTIPMDSASYVPTFAGILALLIAYKVFRFIRSPKQRKGTKVPEPHGALPLIGHLYLLNGRIPYFRTFSAMAEKYGPVFCVKLGCHPTIVVNNREIAKECLTTNDRVFASRPNTCAGRLMGYNNAIFALAPYGNYWREIRKMAVLEILSSHRLEKLKHVRDSETLSLVKDLYSSMTVSSAKNVKGSTEVAISDLLEHMTFNIIVRMIAGKRFGGDTSNEEDNEAWKLRKAIKDATYLSGVFVVADAIPSLSWFDFQGHLSFMKRTAMKLDSILERWLQEHVKMRGEKKNGGCEKDFMDVMLSSFQEENICGYKRDIVIKATSLILVLTGSESTAITLTWALSLLVNHPKILKAALQELDTHVGKERWVEESDIKKLKYLDAIIKETLRLYPPAPLTGIREAMEDCSLVGYDVPKGTRLLINLWNLQRDPEVWPNPNEFEPERFLTTHRDIDFMSQDFELIPFSFGRRSCPGMSFGLQVTHLTLARLLQGFHIFTKDGAHVDMTEGLGVALPKQQQLRLILQPRLPLELYENL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1097 537 Gene3D Cytochrome P450 31 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 Pfam Cytochrome P450 48 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 SUPERFAMILY Cytochrome P450 48 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PANTHER CYTOCHROME P450 82C3-RELATED 20 535 - -
Vra9g1097 537 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1097 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Vra9g1097 537 PANTHER CYTOCHROME P450 82G1 20 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1097 Vra-Chr9 14075967 14078389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1097 23 534 Cytochrome P450 AT4G31970 48.092 4.81e-167 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1097 K17961 - gmx:100806378 840.876