Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1096 ATGGATCCTGCTTCGAATTTCCAAGCTTCTGTTGCAGGATTCTTAGTGTTGCTAATTGCATACAAAGTGTTTAGGTTCATCAGATCTCCTAAACAAAGAAAAGGAACCAATGTTCCCGAACCTCACGGTGCTTTACCTTTGATAGGGCACCTCCACCTTCTCAATGGTAGAATACCCTATTTCAGGACCTTCTCAGCCATGGCTCAGAAATATGGTCCAGTCTTCTGTGTCAAACTGGGTTGCCACCCCACCATAGTGGTGAACAACAGGGAAATTGCCAAAGAGTGCCTCACCATAAATGACAGAGCTTTTGCCTCAAGACCAAACACTTCTGGTGGTAGACTCATGGGTTACAACAATGCAATCTTTGGCCTTGCTCCTTACGGAAATTACTGGCGTGAGATCAGAAAAATGTCTGTTCTCGAGATTTTGTCAAGCCACAGGCTTGAGAAGCTGAAGCATGTCAGAGACAGTGAAACACTGTCTCTTGTGAAGGACTTGTACTCATCAATGACAGTGTCCTCTGAAAAGCACGTGAAGGACTCAAATGAAGTGGCTATAAGCAATCTGTTAGAGCACATGACCTTCAACATAATTGTTAGGATGATTGCTGGGAAGAGATTTGGAGGGGACACCGCCAACGAAGAAGATAATGAAGCATGGAAGCTGAGAAAAGCCATAAAAGATGCCACATATCTGTTTGGTGTTTTTGTGGTGGCTGATGCGATTCCTTCTCTTAGTTGGTTCGATTTCCAAGGTTACGTCAGTTTCATGAAAAGAACAGCTCAACAAACAGACCTTATTCTTGAGAAGTGGCTGCAAGAACATCTGAGAGAGAGAATGAGAGATGGTGAATGCGAAAGAGACTTCATGGACGTTATGATATCAACTTTCGAAGAGCAAGAAGATATTTGTGGCTATAAGAAAGAGACTGTTATCAAAGCAACAGCGATGATGCTTATCCTTACTGCTGGAGGAAGCACAGCCATGACACTAACATGGGCACTGTCCTTGCTCGTAAACCATCCAAAGATTCTAAAGGCAGCCTTACAAGAGTTGGACACCCACGTAGGAAAAGAAAGATGGGTGGAAGAATCTGACATAAAAAAGCTCAAATATCTGGATGCCATTATCAAAGAGACCCTTCGTTTGTACCCGCCAGCACCCTTAACAGGAATCAGGGAGGCAATGGAAGATTGCTCTTTGGTAGGGTATGATGTCCCAAAGGGAACACGATTGCTTATTAATCTGTGGAACTTGCAAAGGGACCCAGAAGTATGGCCTAACCCTAATGAGTTTGAGCCAGAGAGGTTCCTCACCACTCACAGAGACATTGATTTTATGAGTCAGGACTTTGAGTTGATTCCATTTAGCTTTGGAAGAAGGTCGTGCCCTGGCATGTCCTTTGGCCTGCAAGTCACGCACTTGACCTTGGCTCGCTTGCTTCAAGGCTTTCATATTTTCACAAAGGATGGTGCTCACGTTGATATGACTGAAGGGTTAGGAGTCGCTTTGCCTAAGCAACAACAACTTCGACTTATTCTCCAACCTCGTCTTCCATTGGAGCTTTATGAAAACCTTTGA 1584 0.4413 MDPASNFQASVAGFLVLLIAYKVFRFIRSPKQRKGTNVPEPHGALPLIGHLHLLNGRIPYFRTFSAMAQKYGPVFCVKLGCHPTIVVNNREIAKECLTINDRAFASRPNTSGGRLMGYNNAIFGLAPYGNYWREIRKMSVLEILSSHRLEKLKHVRDSETLSLVKDLYSSMTVSSEKHVKDSNEVAISNLLEHMTFNIIVRMIAGKRFGGDTANEEDNEAWKLRKAIKDATYLFGVFVVADAIPSLSWFDFQGYVSFMKRTAQQTDLILEKWLQEHLRERMRDGECERDFMDVMISTFEEQEDICGYKKETVIKATAMMLILTAGGSTAMTLTWALSLLVNHPKILKAALQELDTHVGKERWVEESDIKKLKYLDAIIKETLRLYPPAPLTGIREAMEDCSLVGYDVPKGTRLLINLWNLQRDPEVWPNPNEFEPERFLTTHRDIDFMSQDFELIPFSFGRRSCPGMSFGLQVTHLTLARLLQGFHIFTKDGAHVDMTEGLGVALPKQQQLRLILQPRLPLELYENL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1096 527 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PANTHER CYTOCHROME P450 82G1 12 525 - -
Vra9g1096 527 Pfam Cytochrome P450 39 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Vra9g1096 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 SUPERFAMILY Cytochrome P450 39 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1096 527 PANTHER CYTOCHROME P450 82C3-RELATED 12 525 - -
Vra9g1096 527 Gene3D Cytochrome P450 22 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1096 Vra-Chr9 14054832 14056751 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1096 39 524 Cytochrome P450 AT4G31940 49.091 3.44e-165 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1096 K17961 - gmx:100806378 833.558