Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1095 ATGGATTCCCTTTCACAACCAACACTTGTAGCAGTGATAGCCATAACCATAATTCTTCTCTACAACAGATGGAGGAAGCAAAAGGGTAGTGAAAAAAGGAAGGGTACAGAACCCCCAGAACCCTCAGGTGCCCTACCATTGATTGGTCACCTGCACCTTTTAGGAGGTCGGACACCCCTGGCTAGGACCTTTGCTGCTTTGGCTGACAAATATGGACCCATCTTTCAAATCCGTCTAGGGGCATACCCTGCCCTTGTGATCTGCAACCAAGAGGCCATAAAAGAGTGCTTCACCACCCATGATAAGGTCTTGGCCTCACGCCCTAAGAGTAGCCATGGTGTGCTTCTTGGTTACAATTTTGCAGGGTTTGGATTTGCCCCTTATGGCGCGTACTGGATCAAGATCAAAAAGCTCACCATGCTTGAATTGCTCTCTGCTCGCCGCCTCGAATTCCTCAGGCATGTTTATGAGTCTGAGATTGATACTTTGGTCAATGATCTTTGGATGTATCTTGATGGCAAAACTGATGTTAGAGTCACTATAAGTGATTGGATGGAACGCTTGAGCTTCAACATCGTCACAAAGATGATTGCTGGGAAAAGGTATTTCAGTTATTTGGAAGATGTGGATGATGTAGAAGCACATGGTGTTGTGAAACTTATAAAGGAGTTCATGCATATATCTGGGGAGTTTGTTCCCTCAGATTTAATTCCAGTTCTTGGATGGTTTGGGGTGCAGGGGAAAGTCCTCAAATCCATGAAACGAATTGCAAAAGATTTGGACACCCTTGTCGGAGGTTGGCTTGAAGAACATAAGAAAATTCATTCCCTCAATAACAAATCATTGGACAAACATGATTTCATTGATGTAATGCTCTCTGCCATTGAAGATGATCCTCTCTCTCATCATAATCGTGATACTATCATCAAAGCTAATGTTGCCAGTCTGATGTTAGCGGGATCAGACACGACATCAACCACAATGACATGGATACTGACGATGCTGCTGAAGAATCCAGAGGTTTTGAAGCGAGCACAGGAAGAGATAGAAGATGAAGTTGGAAGAGAGAGAAAGGTGGAAGCAAGTGACATAAAAAACCTGTTTTATCTTCAAGCAATCGTGAAGGAAACTTTGAGGCTATACCCTCCAGGACCTCTGCTGGTGCCCCACGAGGCTACCCAAGACTGCTACATTCAAGGGTACCACGTACCCAAAGGCACACGTGTGTTTGCGAACGTGTGGAAGCTTCACAGAGATCCGAGTGTGTGGTCAGAGGCTGAGAAGTTTTCACCAGAGAGGTTTCTGAATGAGAATGGAGAAGTGGTTGATGAAGGTCACCAGCATTTTGAGTATTTGCCTTTTGGGTCAGGTAGAAGGGCTTGTCCTGGTTCAACTTTTGCAACACAGGTTACTCTCATCACCATTGCTCGTTTGCTTCATGCTTTTCGTTTCGATGTGCCTGTCGATGAACCTGTTGATTTGGAAGAAGGCTTGGGCATCACCTTGCCCAAGATCAACCCTTTGCAGATTCTCTTGAGCTCAAGGTTACCAAATCACTTTTATAACACACACAAATTCTAG 1581 0.4478 MDSLSQPTLVAVIAITIILLYNRWRKQKGSEKRKGTEPPEPSGALPLIGHLHLLGGRTPLARTFAALADKYGPIFQIRLGAYPALVICNQEAIKECFTTHDKVLASRPKSSHGVLLGYNFAGFGFAPYGAYWIKIKKLTMLELLSARRLEFLRHVYESEIDTLVNDLWMYLDGKTDVRVTISDWMERLSFNIVTKMIAGKRYFSYLEDVDDVEAHGVVKLIKEFMHISGEFVPSDLIPVLGWFGVQGKVLKSMKRIAKDLDTLVGGWLEEHKKIHSLNNKSLDKHDFIDVMLSAIEDDPLSHHNRDTIIKANVASLMLAGSDTTSTTMTWILTMLLKNPEVLKRAQEEIEDEVGRERKVEASDIKNLFYLQAIVKETLRLYPPGPLLVPHEATQDCYIQGYHVPKGTRVFANVWKLHRDPSVWSEAEKFSPERFLNENGEVVDEGHQHFEYLPFGSGRRACPGSTFATQVTLITIARLLHAFRFDVPVDEPVDLEEGLGITLPKINPLQILLSSRLPNHFYNTHKF* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1095 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Vra9g1095 526 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 Gene3D Cytochrome P450 22 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 Pfam Cytochrome P450 38 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1095 526 Coils Coil 342 362 - -
Vra9g1095 526 PANTHER CYTOCHROME P450 82C3-RELATED 14 521 - -
Vra9g1095 526 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 521 - -
Vra9g1095 526 SUPERFAMILY Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1095 Vra-Chr9 14015219 14023119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1095 39 521 Cytochrome P450 AT4G31940 46.951 2.36e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1095 - - gmx:100790675 821.617