Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1084 ATGGGTGAGGAATATGGCATTATATCGAAGGAGACAATAAAGCCATCTTTTCCAACCCCTATTCATCTTCAGCATTTCAAACTCTCCTTCCTCGACCAATTGGCTCCTTCATTCCGTGTTCCCATTCTCCTCTTTTACTCTGCCTCTGATGTTACAACCTTTGCTGCCACTGACATCAGTGCACTGTCACAAAAGTTGAAAACTTCTCTCTCAGAAGTCCTCACTCTCTATTACCCATTTTGCGGAAGACTCAGAGACTCTTCAATCATTGAGTGCAACGACGAGGGTGTTCTTTTCATCCACTCTAAACTCCCCATTGAGCTCTCAAACATTCTCAAAAACCCTCAACTTCACACCCTCTGTGAACTTCTCCCATGTCCTCCTTACAACCTTCAACCACAACAAAGGGACACGTCGGGGATCATGGCAGTTCAGTTGAGCCAATTCAAGTGTGGGGGCATAGCCCTTGGCGTGTGCTTCTCACACAAGATCGCTGATGCTTCCACTGCAGCATCGTTTCTCAACGCTTGGGCTGCAACGTCACGTGGACACGGCAATGGCAACCTCGTTCCACCTTTAATGGAAGAGGCTAGTCTGCTTTTCCCACCGAGGAACATATCTGTTGACATGACAAGTGGCATGGTTGGCCAAGAAAAAACTGTGACGAAGAGATTCATATTTAGTGGCAGCAGTATTTCTAGATTGAGACAAACCATAGGGTGCCCCAGTTTCAACCCCTCACGCGTTGAAGCCGTGACGACGCTGCTATGGAAATCATCACTGGAAGCAGCAAAAGAAAGTATAGATTGTGGGGAAGAAAAAATTGTTGCTTCTGGGGTATCCCACACTGTGAACATTCGCAGCAGAATGGTTCCATCTTTGTCGAAGCATTCAATTGGAAACATTTGGCAATACGCGGTGTCTTCGTTGGTGGAAGTGGAGGGGGAAGTGGGGTTGCGTGATTTGGCAGAGAGAATGAGGGAAACGATAGGAAAAGTTGATGGAGATTATATAAAGAAACTTCAGAGTGATGAGTTTGTTGAAGTAGTTGAGGCTATAGAAGGAGCAAGGAGACTGGCTGAACAAAAGGGTATTCGAGGTTATGGGTTTACCAGTTGGGTAGGGTTTGAGTTTTATGAAGTTGATTTTGGATGGGGAAAGCCTATTTATGCTAGCACCATTCCTGTGCCCATAAAAAATTTGGGAACTTTGATGAGCACAAAGGATGGAGATGGCATAGAGGCATGGCTTACCTTGACCACACGTGACATGGCTCGGCTTGAGCACAATGCAGAACTTCTGAACTTTGCGTCGTTTGATTCTTAA 1326 0.4578 MGEEYGIISKETIKPSFPTPIHLQHFKLSFLDQLAPSFRVPILLFYSASDVTTFAATDISALSQKLKTSLSEVLTLYYPFCGRLRDSSIIECNDEGVLFIHSKLPIELSNILKNPQLHTLCELLPCPPYNLQPQQRDTSGIMAVQLSQFKCGGIALGVCFSHKIADASTAASFLNAWAATSRGHGNGNLVPPLMEEASLLFPPRNISVDMTSGMVGQEKTVTKRFIFSGSSISRLRQTIGCPSFNPSRVEAVTTLLWKSSLEAAKESIDCGEEKIVASGVSHTVNIRSRMVPSLSKHSIGNIWQYAVSSLVEVEGEVGLRDLAERMRETIGKVDGDYIKKLQSDEFVEVVEAIEGARRLAEQKGIRGYGFTSWVGFEFYEVDFGWGKPIYASTIPVPIKNLGTLMSTKDGDGIEAWLTLTTRDMARLEHNAELLNFASFDS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1084 441 PANTHER F21J9.9 6 440 - -
Vra9g1084 441 Gene3D - 5 209 IPR023213 -
Vra9g1084 441 Pfam Transferase family 7 433 - -
Vra9g1084 441 Gene3D - 217 437 IPR023213 -
Vra9g1084 441 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 6 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1084 Vra-Chr9 13801150 13802475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1084 13 412 Monolignol Biosynthesis Gene Families AT5G48930 24.018 1.68e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1084 - K13065 gmx:100792323 545.043