Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1083 ATGGAGTTAAACTGGGTTTGGATGATTGTTGCCACTTTCTTGGCATTTCATATTCTTACAAAGAACATAGTGAGAAAGTTGAATGGGTGGTATTATGATAGGAAATTAGGAAAGAAACATAGATTATTGCCTCCTGGTGATATGGGATGGCCTCTTATTGGAAACATAATTCCCTTCATAAAACATTTCTTCTCTCATCATCCTGATTCATTCATCAACAACTTAGTCTCCCAATATGGAGAAAGTGGTATCTACAAAACTCATTTGCTGGGGAAACCAAGCATCATCATATGCACAGCTGAGATGTGCAAGAGAGTGTTGAATGATGATGAGAACTTCAAGCATGGGTATCCAAAATCCACCGTTGAGCTGTTGAAAAACAAGGCTTTGAGCGATGAATGCACTGCAGAACACAAGAGTTTAAGAGAGTTGGTGAGTTCTGGGATTTTGGGTCAAAAAGTTTTGGCAATGAACCTAGAAATTGTGGAGAAGATAGTGATTAATTCATTGGAAGAGTTATCCAGAAGGAAGCAACCCCTTCAGGTTTTCAAAGAGATGGAAAAGATTTCCTTTGAAATCATTGTTCACATCTTGATGGGTTCTCACACTCATTCCAACAACATTGCAAAGTTGAGAGAGTTGTTTCACCAATTCTCCAAATGCAATCCTATATATTCTCTTCCCATTAACTTTCCTGGTTTTGCTTTTCATCAAGGACTCAAGGTAAGAAAGAAGTTGTTGAAGGTAATAGAATCAATTGTGGGTGAAAGGAGGTCAATGATGAAAATGGTAAAAAATGGAGATAATAAGAAAGATCTCATTGACCTTGTTTTGGAAGCCAAAGGGGAAAATGGTGAGGAATTGATTGACAAAGATGTTGGAGATATGTTGTTAATGCTTCTCTTTGCTGGTCACGAAACCACTGCGGTGGCTTTGACATCCTCAGTTTTAAATCTTACCAGACATCCACTAGTGTTTGCAAAAGCCAAGAAAGAGCAAGAAGAAATTGTGAAGGCAAGACCATCATCTCAAAAACAATTAAGTCGTAAGGAAATCAAAAAAATGATTTATCTTTCCCAGGTAATTGATGAAATGTTACGTCGTACCAACATTGCATTTTCTCTTTTTCGTGAGGCAACTAAAGACGTCAATATCAATGGTTATATCATACCAAAAGGGTGGAGAGTTCTAGTTTGGTTAAGAGCTATTCATATGAATCCTAAATATTATCCAAATCCAGAAGAATTTAATCCATCAAGATGGGATGGCAACAATGCCAAGGCAGCAACCTTCCTTCCTTTTGGAGCAGGAACTAGGCTTTGTCCAGGAAATCACATTTTCAAATACGAAATTTCCATATTTTTACACTATTTTCTACTAAATTACAAGTTGGAGCAAACAAGTTCAGAAGGTCCTGAAGCTGTCTTCCCATTCTCTCAGCCAAAAGACTTAGCTAAGCTCATAAAGTTCTCTGAATAA 1479 0.3739 MELNWVWMIVATFLAFHILTKNIVRKLNGWYYDRKLGKKHRLLPPGDMGWPLIGNIIPFIKHFFSHHPDSFINNLVSQYGESGIYKTHLLGKPSIIICTAEMCKRVLNDDENFKHGYPKSTVELLKNKALSDECTAEHKSLRELVSSGILGQKVLAMNLEIVEKIVINSLEELSRRKQPLQVFKEMEKISFEIIVHILMGSHTHSNNIAKLRELFHQFSKCNPIYSLPINFPGFAFHQGLKVRKKLLKVIESIVGERRSMMKMVKNGDNKKDLIDLVLEAKGENGEELIDKDVGDMLLMLLFAGHETTAVALTSSVLNLTRHPLVFAKAKKEQEEIVKARPSSQKQLSRKEIKKMIYLSQVIDEMLRRTNIAFSLFREATKDVNINGYIIPKGWRVLVWLRAIHMNPKYYPNPEEFNPSRWDGNNAKAATFLPFGAGTRLCPGNHIFKYEISIFLHYFLLNYKLEQTSSEGPEAVFPFSQPKDLAKLIKFSE* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1083 492 SUPERFAMILY Cytochrome P450 39 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PANTHER CYTOCHROME P450 88D6 23 470 - -
Vra9g1083 492 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 PANTHER CYTOCHROME P450 26 23 470 - -
Vra9g1083 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vra9g1083 492 Pfam Cytochrome P450 44 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1083 492 Gene3D Cytochrome P450 34 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1083 Vra-Chr9 13770175 13780215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1083 23 483 Cytochrome P450 AT1G05160 43.629 9.75e-143 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1083 K04123 K17875 vra:106773832 993.801