Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1076 ATGTTTGTTCCAAAAGTGAATGAAAAGCTGCTTGAAGACCTTGAAGTAATGGGATTTCCAAAGGCACGGGCAACCAGAGCACTTCATTGTTCTGGCAATACCAGCTTAGAAGATGCTATAAATTGGATAGTTGATCATGAGAATGACATTGATATTGATGAGATGCCATTGGTAGATGTAGACGTTGAGGTAGAGTCAACCGAGTCCTTCCCCATCTCAGAAGAAATCAGAATCAAAGCACAGAGTTTAAGGGAACAAGAACGTAAGAGGATAGAGCAGGAAGAGAAAAGATTGGAGAGAGAAAGGGAGAAGGAGAGGATTCAAGCAGGTAAGAGACTCCTTGAAGCAAAGCGAATTGCTGAAGAAAATGAAAGACAACGGAATTTATCCCTAAGAAAAGCGGAAAAAGAAGAAGAGAAAAGAGCTAGAGAGAGAGTTCTACAGAAACTAGAGCAGGATAAGTTAAATAGAAAATTTAAACAAGGATTGCCTTCAGAAAGCCAAGGAACTGTCAAATCATCTGCTACTAAACCACAAAAGGAAAAGAAGTTAAATCCAGTTTATACAACTACAAAAGCTGAGCAGTTAAGAGAATGTCTGAGGAATCTGAAGCGTAACCATCAGGGTGAGGATGCAAGAGTCAGAAGAGCCTTTCAAACACTACTAATCTATGTTGGAAATGTTGCCAAGAATCCCAAGGAGGAAAAGTACAGGAAAATACGACTGAATAATCCATTATTCCTGGATAGAGTTGGAAGTTTAAATGGAGGTGTTGAATTTCTTGAGCTATGTGGTTTTGAGAGAACTGGTGACTTCTTGTATCTTTCTCAAGAAAAGGTTGACATGGCACTGCTGAATTCAGCTGGTTTTGTCTTAAATTCTGCAATGACAAACCCTTTCTTTGGAGTTTTAAGTACTACTCACAATTAA 930 0.3892 MFVPKVNEKLLEDLEVMGFPKARATRALHCSGNTSLEDAINWIVDHENDIDIDEMPLVDVDVEVESTESFPISEEIRIKAQSLREQERKRIEQEEKRLEREREKERIQAGKRLLEAKRIAEENERQRNLSLRKAEKEEEKRARERVLQKLEQDKLNRKFKQGLPSESQGTVKSSATKPQKEKKLNPVYTTTKAEQLRECLRNLKRNHQGEDARVRRAFQTLLIYVGNVAKNPKEEKYRKIRLNNPLFLDRVGSLNGGVEFLELCGFERTGDFLYLSQEKVDMALLNSAGFVLNSAMTNPFFGVLSTTHN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1076 309 MobiDBLite consensus disorder prediction 161 175 - -
Vra9g1076 309 CDD PUB_UBA_plant 200 304 - -
Vra9g1076 309 CDD UBA_PUB_plant 6 53 - -
Vra9g1076 309 SUPERFAMILY PUG domain-like 187 300 IPR036339 -
Vra9g1076 309 Pfam UBA/TS-N domain 7 43 IPR015940 -
Vra9g1076 309 SMART PGNneu 216 276 - -
Vra9g1076 309 Gene3D - 194 294 - -
Vra9g1076 309 PANTHER F13M7.16 PROTEIN 1 306 - -
Vra9g1076 309 Coils Coil 77 108 - -
Vra9g1076 309 MobiDBLite consensus disorder prediction 157 182 - -
Vra9g1076 309 Gene3D - 8 53 - -
Vra9g1076 309 Coils Coil 119 156 - -
Vra9g1076 309 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Vra9g1076 309 Pfam PUB domain 213 281 IPR018997 -
Vra9g1076 309 Coils Coil 193 213 - -
Vra9g1076 309 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 1 306 - -
Vra9g1076 309 SUPERFAMILY UBA-like 5 57 IPR009060 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1076 1 304 C2H2 Transcription Factor Family AT1G04850 61.039 1.85e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1076 K24348 - gmx:100781260 485.337