Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1066 ATGGCCACCCCAAACGACGCCGTTTCGCCCACCAAGAAGCCTCAACCCATCCCCTGGACCCACCAAGAAACTGTCCACCTCATCCGCGCCTACCAGGAGAAGTGGTACGCGCTCAAGCGCGGCCCGCTCCGCCACAACCAGTGGGAGGAGGTCGCCGTCATCGTCGCCGCCCGCTGCGGCTACGACCTCGCGTATCCCGCCAAGTCCGCCCTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCACCGCGCCGAAAAGAAAAACGTCACCGCCACGCTCCGTCCCGCCGCCTGGCAGTACAACGCTCTCATGGAGGACCTCGAATGCGGCCCCCTCCCCATCTCCGCCCTCGCCCCGTTCCGAAACGACACCGATTCAGATCCCGACGACGACGGCACTTATAGGAACGGCAATGATGGCGATGAGAGCTTTGTGAAGTCGAAGAGTATTAACTGTACTCTCGGCGAGAGGCCCGTGAGAATGAGAAACGGTGAAAGAGGGTTTTTGAGGGAGCGTTCTGAAGAAGAACGAGACGAGGTCGAAGATCGCGACGACGACGTTTTGGCGTTGCCGGCGGAGATGAGGGCTTTCGCTGATAGGTTTATTGGAATGGAGAGTTTGAAGATGGAGATGATGAAGGAAACTGGAAGGTGTAGGTTGGAAATGGAGAAGAAGCGGATCCAGATGATTGTGGACTCGCAGCGGAGGATCGTTGATTCCATTGGGAGGGCGTTTGGGTCTAACAAGAGGGTCAAGATTACTCAACAAATCTGA 780 0.5795 MATPNDAVSPTKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVIVAARCGYDLAYPAKSALQCRHKMEKLRQRHRAEKKNVTATLRPAAWQYNALMEDLECGPLPISALAPFRNDTDSDPDDDGTYRNGNDGDESFVKSKSINCTLGERPVRMRNGERGFLRERSEEERDEVEDRDDDVLALPAEMRAFADRFIGMESLKMEMMKETGRCRLEMEKKRIQMIVDSQRRIVDSIGRAFGSNKRVKITQQI* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1066 259 MobiDBLite consensus disorder prediction 125 139 - -
Vra9g1066 259 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 255 IPR044823 -
Vra9g1066 259 Pfam Myb/SANT-like DNA-binding domain 18 108 IPR044822 -
Vra9g1066 259 ProSiteProfiles Myb-like domain profile. 18 81 IPR001005 -
Vra9g1066 259 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 255 - -
Vra9g1066 259 Gene3D - 19 86 - -
Vra9g1066 259 MobiDBLite consensus disorder prediction 120 144 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1066 19 102 Trihelix Transcription Factor Family AT3G14180 28.571 6.90e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra9g1066 Myb_DNA-bind_4 5.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1066 - - var:108346948 461.84