Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1057 ATGGATGGTGAAAGCGTTGAGGATTTTAATACCGGAGATGAGAGTTTTTCAGACATCGTTCCTAGTGTGAACATGTGTTTTGGCAGTATGGAGGATGCCAAGAAATTTTATTGTGATTATGGAAAAAGATGTGGTTTTGGTGTTCGAACAAGAACTTCAAAGAAGAACAACAAAAACAAAGTTTATTACTTGAGATTAGTTTGTTCAAGGGAAGGTAAATATGTTTCTAACATTCGTCCTGAAGTGAAAACTCTACCTAGTCAAACAAATCAATGTCCTGCAGGAATCACATTTGCTAGAAAAGATGACAAATGGGTTGTTAGGACTGTTGTTGTAGAGCACAGTCATGAGCTTTGTCCACAAACCTCCAATCTCATTCGTGGCAATATAAAATTGAACATGCACGCGAAACACACGTTGGAAGTTAACGATGACGCGGGTGTACGTATAAACAAGAGTTTTCTTAGCATGGTGAGTGACGCTGGTGGATACGAAAATATGGAATTTATGGAGAGAGATGCTAGAAACTTCATCGGTCAACATAGAAGGTCAGTTTGTAAGGACGGAGATGGTCAGACGCTACTACGTCACTTTTCAAAAATGAGAGACCTGAATAACGATTTCTTCTACGAACTAGAAATGGATGAAGGAAATAGAATTACTAGTGTATTTTGTGCGGACGCTAAAAGCTGA 693 0.3867 MDGESVEDFNTGDESFSDIVPSVNMCFGSMEDAKKFYCDYGKRCGFGVRTRTSKKNNKNKVYYLRLVCSREGKYVSNIRPEVKTLPSQTNQCPAGITFARKDDKWVVRTVVVEHSHELCPQTSNLIRGNIKLNMHAKHTLEVNDDAGVRINKSFLSMVSDAGGYENMEFMERDARNFIGQHRRSVCKDGDGQTLLRHFSKMRDLNNDFFYELEMDEGNRITSVFCADAKS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1057 230 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 11 230 - -
Vra9g1057 230 Pfam FAR1 DNA-binding domain 35 119 IPR004330 -
Vra9g1057 230 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 230 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1057 Vra-Chr9 13413386 13414078 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra9g1057 FAR1 2.2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1057 - - vra:106759276 453.751