Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1047 ATGGCTTCTTCCCGCGTTATCTTCAACCTTACTCTCCCTTTTCCCTCCGATGCACCACCAATTCCTTCCACATGTCACTCTCTTTCTCTCTCACACTCCTCTCTCTTCACTACCCCAAAGATCGTTTGCTCCAGTGCTCCGCGGCGCACGTGTGGTGTGGTGTACTCTCATATGACCATGGAGGAGAAGCTCCCTGCCGAGAACCGAATGCTCGTGTACGTGCCTCCTCATCCGTTGATCAAGCACTGGGTTTCAGTTTTGAGGAATGAGCAGACCCCTTGTCCCATCTTCAGAAATGCACTGGCCGAATTGGGAAGGCTACTTATGTATGAAGCTGCAAGGGATTGGTTGCCCACTGTTTCTGGAGAGATTCAATCACCGTTGGCTGTAGCCTCTGTGGAATTCATTGACCCAAGGGAGCCTCTGGCTATCATTCCAATCTTGAGGGCAGGCCTTGCTCTTGCTGAACATGCTTCATCAGTCTTGCCTGCAACAAAAACATACCATCTAGGAATAAGCAGAAACGAGGAAACTCTTCAGCCGACTATATATTTGAACAAGTTACCTGAGAAATTTGCCGATGGATGTAAAATCTTTGTGGTTGATCCCATGCTGGCAACAGGTGGTACTATGGTGGCTGCTCTGAACCTCTTAAAGGATCGAGGAGTTGACAACAAGCATATTAAAGTGATATCAGCTGTTGCTGCTCCTCCGGCTCTTCAAAAGCTAAGTGAGCAGTTTCCTGGGCTTCATGTCTATACTGGAATAATTGATCCTGAAGTTAATGAAAAAGGGTTCATAATTCCAGGCCTTGGAGATGCAGGGGACAGGAGCTATGGTACAGATCCATGA 852 0.4777 MASSRVIFNLTLPFPSDAPPIPSTCHSLSLSHSSLFTTPKIVCSSAPRRTCGVVYSHMTMEEKLPAENRMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNALAELGRLLMYEAARDWLPTVSGEIQSPLAVASVEFIDPREPLAIIPILRAGLALAEHASSVLPATKTYHLGISRNEETLQPTIYLNKLPEKFADGCKIFVVDPMLATGGTMVAALNLLKDRGVDNKHIKVISAVAAPPALQKLSEQFPGLHVYTGIIDPEVNEKGFIIPGLGDAGDRSYGTDP* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1047 283 CDD PRTases_typeI 137 257 IPR000836 -
Vra9g1047 283 Pfam Uracil phosphoribosyltransferase 74 281 - -
Vra9g1047 283 TIGRFAM upp: uracil phosphoribosyltransferase 72 281 IPR005765 GO:0004845|GO:0006223
Vra9g1047 283 Gene3D - 58 281 IPR029057 -
Vra9g1047 283 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 35 277 - -
Vra9g1047 283 PANTHER URIDINE KINASE 35 277 - -
Vra9g1047 283 SUPERFAMILY PRTase-like 72 280 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1047 Vra-Chr9 13218757 13229426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1047 44 282 PRT Gene Family AT3G53900 71.130 2.99e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1047 K00761 - gmx:100797953 469.544