Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1045 ATGGTCTGTGAATGCATGGATAATTTGCTCTGTGATGAGGTGTGGCTTTCAAATTCTGAAAACACCTTTGAAGAAGAAGTTGGTGATTTTGTTTCACTAAAGAGTTATGAAAACAAAGAGTTTGAAGAGACTTTTGCACTGTATCTAGAGAAGGAGGCTTCTTCTTTGCCAGAACAAGACTATGCAAAATACTTGCACTCCAACAATTTGTTTGTTCCTAGGTGTAGAGTTATTCAATGGCTTGTCAAGTGTGGAAGTCACTTTAATCTTTCTTTTGGAACAGTTTTCTTGGCTGTTAACTATCTTGATCGCTTTGTATCCATTTGTCAAAGCAATGATTGGAAATACTGGATGCTTGAATTGCTTTCTATTTCTTGCTTATCAGTTGCCATAAAGTTCAATGAGAAATCAGCACTTTCCATGCATGAAATTCAGGTGGAGGGCTTGAATTACTCATTCGAATCAAGTGTAATTTTGAAGATGGAGTTGATCCTATTGAAAGCATTGGGGTGGAACCTTAACTCTGTGACAAGTTATTCTTTTCTGGAAATTGTGGATAGTGATTTCTTGGAATCTCATCTTTATCAGAAGCTTATTTCACATGCCACTGAACTCCTTCTCCAAGCTACTTTAGATCAGAAAATGCTGGAATTCAGGCCAAGCATTATTGGCATATCTGCATTGTGCTGCACTCTTGAACATTTATTTCCACAAACATCAGATACTTACATTGCTTACATTATGAGACTCTTGAACCAAAGTCAGAAGGATGATATGATAAAGTGTGATGAGTTGATGCAAAGACAGAGTTCATTCTGGTGTGAAAATGAGCGCCATTGCCCATTAAGCCCAACAACAGTACTGTTGAACACATGA 876 0.3744 MVCECMDNLLCDEVWLSNSENTFEEEVGDFVSLKSYENKEFEETFALYLEKEASSLPEQDYAKYLHSNNLFVPRCRVIQWLVKCGSHFNLSFGTVFLAVNYLDRFVSICQSNDWKYWMLELLSISCLSVAIKFNEKSALSMHEIQVEGLNYSFESSVILKMELILLKALGWNLNSVTSYSFLEIVDSDFLESHLYQKLISHATELLLQATLDQKMLEFRPSIIGISALCCTLEHLFPQTSDTYIAYIMRLLNQSQKDDMIKCDELMQRQSSFWCENERHCPLSPTTVLLNT* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1045 291 Pfam Cyclin, N-terminal domain 45 174 IPR006671 -
Vra9g1045 291 PANTHER CYCLIN-D7-1-RELATED 32 286 - -
Vra9g1045 291 CDD CYCLIN 74 166 IPR013763 -
Vra9g1045 291 PANTHER CYCLINS 32 286 IPR039361 -
Vra9g1045 291 SMART cyclin_7 79 167 IPR013763 -
Vra9g1045 291 SUPERFAMILY Cyclin-like 41 174 IPR036915 -
Vra9g1045 291 Pfam Cyclin, C-terminal domain 176 270 IPR004367 -
Vra9g1045 291 Gene3D - 58 174 - -
Vra9g1045 291 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Vra9g1045 291 Gene3D - 49 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1045 Vra-Chr9 13168979 13172039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1045 43 235 Core Cell Cycle Gene Families AT1G70210 32.821 5.44e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1045 K18813 - gmx:100792420 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g1045 9 13168979 13172039 Vra9g1045 9 13168979 13172039 ECH