Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g1042 | ATGGCCAACCTCAACATGCTCCTCGTACTCTTGTCTTTGTTGCTGTTCCTTCTGATCCCAGTTTCTTCTCAGCCTAATCAGATCTTCTATGCTGGATTCAAGGGTTTGGATAGCAGCAACATGACCCTTAATGGTGTAGCAGAAATTGAGCCAAGTGGGGTACTGAAACTCACAAATGATTCAAGTAAAGTAATGGGTCATGCTTTTTATCCAACTGCTCTTCAGTTCAAGAACTCCAGTGATGGTAAAGCTTTCTCCTTTTCTTCCTCTTTTGCTTTGGCTATTGTTCCTGAGTTTCCAAAGCTTGGAGGGCATGGCCTTGCTTTTACAATTGCAACTTCCAAGGATCTGAAGGCTCTTCCAAGCCAGTATCTTGGTCTTCTTAACTCAAGTAGCATAGGGAACTTCTCCAACCACCTTTTTGCTGTCGAGTTTGACACAGCCCAAGATTTTGAGTTTGGGGACATCAATGATAACCATGTTGGAATTGACATCAATAGCTTGGTATCCAATGCTTCTGCTCCTGCTGGGTTCTACACTGGGGATCATGATTCAGACAAACAGAATCTCACTCTCAAAAGTGGGCAACCTATTCTGGTTTGGGTTGATTATGATTCTGCTCAAAGTGTTGTTAATGTCACAATTTCTGCATCTTCTACCAAACCCAGAAGACCACTCTTGTCTTTTCCGGTGGATCTTTCACCAATCCTTAGGGATTCCATGTATGTAGGGTTCTCTGCATCAACAGGGTTGCTTGCTAGCTCCCATTACATTTTGGGTTGGAGCTTCAAAATCAATGGACCAGCAACACCCCTTGATCTCTCTTCCCTCCCACAGCTTCCAGGGCCAAAGAGGAAACACACATCTCTGATAATTGGGGTTTCAGTGTCTGGAGCTGTTCTTGCATTGTTTGCTGTCTTACTCGGCTTCTACATGTACAGAAGGTACAAGAATGCTGATGTTATAGAAGCTTGGGAGCTTGAGATTGGGCCACACAGGTACTCCTACCAAGAGCTCAAGAAAGCAACAAAAGGTTTCAAGGACAAAGAGCTGCTTGGACAAGGTGGATTTGGGAGTGTCTACAAGGGAACATTGCCAAATTCCAACACCCAAGTTGCTGTCAAGAGAATCTCACATGACTCCAAACAGGGCCTGAGGGAATTTGTGTCAGAAATAGCCAGCATAGGCAGGCTTCGCCACCGGAATCTGGTTCAGCTTCTGGGGTGGTGTCGCCGGCGCGGTGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGGAGCTTAGACAAGTACCTGTTTGATGAACCAGAAATAATCCTGAGTTGGGAGCAAAGGTTTAAGGTGGTCAAGGATGTTGCTTCTGCCCTTTTGTATCTGCATGAGGGCTATGAGCAGGTGGTGATACACAGAGATGTGAAGGCTAGCAATGTGCTGCTAGATGGAGAACTGAATGGAAGACTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGTGCTAACCCAAGTACCACAAGGGTAGTGGGGACATTAGGGTATTTGGCACCTGAGGTGCCTAGGACAGGGAAGGCCACACCTAGCTCAGATGTTTTTGCATTTGGTGCACTTTTACTTGAGGTGGCATGTGGGATGAGGCCACTTGAGCCAAAGGCAATGCCAGAAGATTTGCTTTTGGTTGATTGTGTGTGGAACAAGTACAAGCAAGGGAGAATACTTGATGTGGTGGACCCTAGACTCAATGGTGTTTTTAATGAAAGAGAGGTGCTGATGGTGTTGAAATTAGGGCTTCTATGTTCAAATGGTTCTCCCACTGCTAGGCCTAGCATGAAACAGGTGGTGAGGTTCTTGGAGGGAGAAGTTGGTGTGCCTGATGAGTTGAGAAGGCCAGGAATGACAGGTTCTCAAGAGGGTTTTGATCAGTGCTTGCACTTACTTGAATCTTCTTCTTTTCATCAGATGAGCAGAAGCACCTATGGTGGTACTTCTCCTTCTTTTTTTACTGATACATCACTCTTTACTCCCACTGCTAAAGGAGAAACAATGTGA | 2046 | 0.4536 | MANLNMLLVLLSLLLFLLIPVSSQPNQIFYAGFKGLDSSNMTLNGVAEIEPSGVLKLTNDSSKVMGHAFYPTALQFKNSSDGKAFSFSSSFALAIVPEFPKLGGHGLAFTIATSKDLKALPSQYLGLLNSSSIGNFSNHLFAVEFDTAQDFEFGDINDNHVGIDINSLVSNASAPAGFYTGDHDSDKQNLTLKSGQPILVWVDYDSAQSVVNVTISASSTKPRRPLLSFPVDLSPILRDSMYVGFSASTGLLASSHYILGWSFKINGPATPLDLSSLPQLPGPKRKHTSLIIGVSVSGAVLALFAVLLGFYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGSVYKGTLPNSNTQVAVKRISHDSKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPEIILSWEQRFKVVKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPEVPRTGKATPSSDVFAFGALLLEVACGMRPLEPKAMPEDLLLVDCVWNKYKQGRILDVVDPRLNGVFNEREVLMVLKLGLLCSNGSPTARPSMKQVVRFLEGEVGVPDELRRPGMTGSQEGFDQCLHLLESSSFHQMSRSTYGGTSPSFFTDTSLFTPTAKGETM* | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g1042 | 681 | Pfam | Protein kinase domain | 346 | 550 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra9g1042 | 681 | Pfam | Legume lectin domain | 29 | 277 | IPR001220 | GO:0030246 | |
Vra9g1042 | 681 | CDD | STKc_IRAK | 352 | 618 | - | - | |
Vra9g1042 | 681 | PANTHER | L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 | 7 | 655 | - | - | |
Vra9g1042 | 681 | SMART | serkin_6 | 346 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra9g1042 | 681 | PANTHER | - | 7 | 655 | - | - | |
Vra9g1042 | 681 | ProSitePatterns | Protein kinases ATP-binding region signature. | 352 | 375 | IPR017441 | GO:0005524 | |
Vra9g1042 | 681 | Gene3D | Transferase(Phosphotransferase) domain 1 | 423 | 628 | - | - | |
Vra9g1042 | 681 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 33 | 285 | IPR013320 | - | |
Vra9g1042 | 681 | SUPERFAMILY | Protein kinase-like (PK-like) | 328 | 638 | IPR011009 | - | |
Vra9g1042 | 681 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 422 | - | - | |
Vra9g1042 | 681 | CDD | lectin_legume_LecRK_Arcelin_ConA | 30 | 267 | IPR001220 | GO:0030246 | |
Vra9g1042 | 681 | ProSiteProfiles | Protein kinase domain profile. | 346 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra9g1042 | 681 | Gene3D | - | 28 | 267 | - | - | |
Vra9g1042 | 681 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 467 | 479 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g1042 | Vra-Chr9 | 13136935 | 13139469 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g1042 | 21 | 680 | Receptor kinase-like Gene Family | AT3G55550 | 58.507 | 0.0 | 766 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Vra9g1042 | Pkinase | 8.4e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g1042 | - | - | gmx:100801247 | 1150.58 |