Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1024 ATGAACGACAACTTGTTAACAACATTTGTGCAAGATCCTGTCTCTCCTTTGGTCTATCACCTTGATAAACAACATGTGTATGCCACAAAAACGAAGTTAACTAGGTCTGTGTCATTTCCTCTACCTGACCCCTCATCAAAAAGAGAAAAATTTGAGGCTGTAGGGAACGCTTTTTCACCGGAAGGGAAAGGAAAATCATGTTTTGAAAGCAAAACACCAAAGTCAGTTCAATTTGAATCCTCGAAAAAGTTTTACCTAAGGTCCTTGTCTCAAAGTTTCAATGTAAATGAAGCAATGATTACAAGAGATGTTACTAGTTCTTCACCTCAGGATCATAGTCTCAACGAAATCAAACATTTTAAGAATCTGAAACAGAAAATAAAGCATGTTATAGGAGAAAGTAGAAAAGAAAAGCTTCGAGTAGCTATGGATGCTATTATTGACAAACTTCCTCAAGGCCATGGGATATCGAATAATTTGAAGAAAGAAGTTTTTAAGAAAATGACAGATTCTAATGATAGTAGAGAAGGTGAAAACTGTCATGGAAGATATAATGAAAGTGATCGTGTTACTAGTTCATTTGCCAAGCATCACTGGAACATCATAAGAAGAAAATTGTCTCTTGAAGAACCACTAGACAATTATTTTCGCTCCCATGAGAAGGGCTTTAATTCAGAAAAAATTCACCTCCAATCCAAGCAGCTAAAATTAAGAACAGAAAAGGGACATTCACCATTGAAGATGCTGGTACAAAGGATGCTTTCATTGCCTGATCTCAATTCCTTGTCCTATCCTTATCAGAATAAGGACTTTCCTGATATTTCATCCGTGACTGAGCCAAAGCCAAAAGTAGCTTCTGGGGATGGAACATTGAGTTCAGAGAACAGTTCCAATCAGAAAAAGAGGCCTGGCCTTAATTTACATTCAAAAATTCGGCTTCAACCAGAGACACTTGCAGAAGATTTGATTCATAAACACCCTGACAGTGTGGATGAAAATGATCAAGAGATTAGTAATATTGTTGAACAAGGATCTGAGTGCAGCAGTGAGATTAATGGCAAGGCTGGTGTGGCAACTGATGATTTTGGACATAGTTGTTTTAAAAGTGTTGACACCTCTGATGACCAAGAAATGATTGAGCCGATAAAAGAAAACATGACTGCAATAGAAGAATCAGAACCTGGCATTGAGCTAGAAAATATTATTGAGCAACATGAGGCTACCATGGATTCACTCAAAGTGCAAGACACCATAGAGAGTGCTCAAAAAGTGGAGATTCAAAGCAAGAACTTGAACTATGACATTACTTTTTCTCATATCCCCATCAAAGACAAAGCTGAGTTTAACTACGTGAAATTTGTAATTGAGATATCTGGACTGACTGGTAAAGATTGCCTTTCTGCATGGCATTCAAGTGACCACCCAGTTGATCCACTACTCTATGAAGAAATGGAGAATGACCTTGATTTCTGCACTTATGGGGGCAGTGGCCAGTGCAATCACCATGTTTTGTTTGACCTAATCAATGAGACATTGTTGGAACTTTCTGGGAGGTGTCACTGCTGCTGTTCCATACCTTTTTCATCTTCTCATCCAATGCCAAAAGGGTGTCACACTCTTCATCAAGTGTGGACTCATATGAACAAGTCCTTGTGTCTCAGATCCAAAACTGGGCTAACCATAGATGACCATGTAAGTCGTGATCTAGAAAGGCGTGATGGGTGGGTGAACCCTAAATTGTATGCACAGTGTGTCAGTTTGGAGCTTGAAGACTTTATTTTGCATGATCTTCTGGAGGAAATATCATGTGACTTAGCATGCATTTAA 1827 0.3864 MNDNLLTTFVQDPVSPLVYHLDKQHVYATKTKLTRSVSFPLPDPSSKREKFEAVGNAFSPEGKGKSCFESKTPKSVQFESSKKFYLRSLSQSFNVNEAMITRDVTSSSPQDHSLNEIKHFKNLKQKIKHVIGESRKEKLRVAMDAIIDKLPQGHGISNNLKKEVFKKMTDSNDSREGENCHGRYNESDRVTSSFAKHHWNIIRRKLSLEEPLDNYFRSHEKGFNSEKIHLQSKQLKLRTEKGHSPLKMLVQRMLSLPDLNSLSYPYQNKDFPDISSVTEPKPKVASGDGTLSSENSSNQKKRPGLNLHSKIRLQPETLAEDLIHKHPDSVDENDQEISNIVEQGSECSSEINGKAGVATDDFGHSCFKSVDTSDDQEMIEPIKENMTAIEESEPGIELENIIEQHEATMDSLKVQDTIESAQKVEIQSKNLNYDITFSHIPIKDKAEFNYVKFVIEISGLTGKDCLSAWHSSDHPVDPLLYEEMENDLDFCTYGGSGQCNHHVLFDLINETLLELSGRCHCCCSIPFSSSHPMPKGCHTLHQVWTHMNKSLCLRSKTGLTIDDHVSRDLERRDGWVNPKLYAQCVSLELEDFILHDLLEEISCDLACI* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1024 608 Pfam Domain of unknown function (DUF4378) 447 600 IPR025486 -
Vra9g1024 608 PANTHER DUF4378 DOMAIN PROTEIN 143 608 - -
Vra9g1024 608 PANTHER PROTEIN TRM32 143 608 IPR044257 -
Vra9g1024 608 MobiDBLite consensus disorder prediction 272 307 - -
Vra9g1024 608 MobiDBLite consensus disorder prediction 288 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1024 Vra-Chr9 12820879 12823032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1024 1 594 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.848 7.42e-49 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1024 - - gmx:121174644 803.897