Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g1002 ATGTTCATTTTCCTCCTCACTCTTCTACTGTTCTTCGTGTTTCTCCTTAGTTTCTTCATCGGAAAACAATATGGTTATCAGCGTAACCATACACCTCCTTCACACCCTATCATTGGATGCCTCGTTTCTTTCTACCAGAACCGCCACCGTCTCCTCGACTGGTACACCGAACACATAGCACAATCCCCGACCCACACCATCGTCGTTCACCGGCTCGGCGCACGTCGCACGGTGGTGACGGCGAACCCCCGCAACGTAGAGTACATTCTGAAGACCAACTTCGCCAACTTCCCCAAAGGCAAACCCTTCACCGAAATCCTTGGAGACCTTCTCGGGTGCGGGATTTTCAACGTCGATGGCGAGCTCTGGCAAGTGCAGCGCAAGCTAGCGAGCCACGAGTTCAGTACGCGCTCCCTTAAGGACTTCATCGTGAAAACGCTACAGGAAGAGGTCCAACACAGGCTTATTCCAATACTTGAGCAGGCATCACGTGAGCAACACGTGATAGACCTGCAGGACGTGCTGCGGAGACTTACGTTCGACACGGTGTGTAAGGTGTCGTTAGGCTACGACCCGTATTGCCTGGACCTGGAAAAGCCGCTGCCCCCTCTTCTGACAGCTTTCGACACCGCCTCGGAAGTGAGCGCCGCACGCGGCGCAGCGCCAGTGTTTCTGCTGTGGAAGATGAAGAGAATGCTGAACATGGGGTCAGAAAAGGCTCTGAAAGAAGCCGTGAAGCTGGTGCATGAGTCGGTTATGAAGATCATAAAAGGAAAGAAAGATGAAATGACATATAATGAAAAAAAAGGTGGCACCGATTTGCTGGCACGGTTGTTGGAGGCAGGGCAAGAGGAGACGGTGGTGAGGGATATGGTAATAAGCATGATAATGGCGGGGAGAGACACCACGTCGGCGGCGATGACGTGGCTGTTCTGGTTGTTATCGAAGCATCGAGAGGAAGAAGCGTTACTAGTGAAAGAGGTTTATGGTGGAAATAAGCAATGTGAGGGTTTGGATTATGAGTGTTTGAAAGAGATGAAGTTGTTGAAGGCGTGTTTGTGTGAGTCGATGAGGCTGTATCCGCCGGTGGCGTGGGACTCGAAGCATGCAAGTGGTGCTGATGTGTTACCTGACGGAACCCACGTCGGGAAAGGGGAAAGGGTGACATATTTTCCATACGGGATGGGGAGAATGGAATCTCTGTGGGGGAAGGATTGCTATGAGTTTAAACCAGAACGATGGTTTGATGAAGAGAATGTTGATAATGGGGTTCTGAAGGGTGTGAATCCGTATAAGTTCCCGGTTTTTCAGGCGGGTCCAAGAGTTTGTCTTGGGAGGGAAATGGCTTTTATTCAGATGGAGTATGTGGTGGCTTCTATCCTTAATCGTTTTGTCATCTCGCCGGTCTCCGATGAGCAGCCGCGTTTTGTTCCTCTTTTAACAGCTCATATGGCTGGAGGATTCAAAGTGAGGATCAACAGCAGAACTGGAGCAGGAACTCAGTGA 1506 0.5066 MFIFLLTLLLFFVFLLSFFIGKQYGYQRNHTPPSHPIIGCLVSFYQNRHRLLDWYTEHIAQSPTHTIVVHRLGARRTVVTANPRNVEYILKTNFANFPKGKPFTEILGDLLGCGIFNVDGELWQVQRKLASHEFSTRSLKDFIVKTLQEEVQHRLIPILEQASREQHVIDLQDVLRRLTFDTVCKVSLGYDPYCLDLEKPLPPLLTAFDTASEVSAARGAAPVFLLWKMKRMLNMGSEKALKEAVKLVHESVMKIIKGKKDEMTYNEKKGGTDLLARLLEAGQEETVVRDMVISMIMAGRDTTSAAMTWLFWLLSKHREEEALLVKEVYGGNKQCEGLDYECLKEMKLLKACLCESMRLYPPVAWDSKHASGADVLPDGTHVGKGERVTYFPYGMGRMESLWGKDCYEFKPERWFDEENVDNGVLKGVNPYKFPVFQAGPRVCLGREMAFIQMEYVVASILNRFVISPVSDEQPRFVPLLTAHMAGGFKVRINSRTGAGTQ* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g1002 501 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 PANTHER CYTOCHROME P450 11 492 - -
Vra9g1002 501 PRINTS E-class P450 group IV signature 289 315 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 PRINTS E-class P450 group IV signature 346 362 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 PRINTS E-class P450 group IV signature 443 461 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 SUPERFAMILY Cytochrome P450 31 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g1002 501 PANTHER CYTOCHROME P450 94B3 11 492 - -
Vra9g1002 501 Pfam Cytochrome P450 31 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g1002 Vra-Chr9 12312363 12314235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g1002 4 496 Cytochrome P450 AT3G48520 58.990 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g1002 K20665 - gmx:100800427 835.099