Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0995 ATGGGGGCTCGTTGCTCTAAATTCTCTTTCTGCTGGTTCCACTCCCACCTCAAGCCTTCTGTCCTTGAGTCCTCTGACCAAGAAAATGGTGAGAAGCATGAGAGAAAATTGTGGCCCAGTTTTGGTGAGTTCAGTTTGGATCAACTGAAGACTGCCACAAATGGGTTTTCCTCAGAAAACATAGTGTCTGAGCATGGTGAGAAAGCTCCCAATGTTGTATACAAAGCAAAGCTTGATAATGGACAGTGGATCGCCATCAAACGTTTCAACAAGTTTGCTTGGCCTGATTCTCGCCAATTCCTAGAGGAAGCCAAACAAGTGGGGAGCCTTAGAAGCGAACGCCTAGCAAATTTGATTGGTTATTGCTATGAAGGGGAAGAGAGGCTTCTAGTAGCAGAGTTTATGCCACATGAAACTCTGGCCAAGCATCTCTTTCATTGGGAGGCACAGCCAATGAAGTGGGCCATGAGGTTGAGGGTCGCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACTAGTAAAGGAAGGGGCTTGTATCATGATCTCAATGCCTATAGGATATTGTTTGATCAGGATGGTAATCCCAGGTTGTCCTGCTTTGGACTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCTTTCACTCCTCCTGAGTACTTACGGACTGGTAGAGTGACCCCAGAGAGCGTGGTATACAGTTTTGGAACTCTGCTGCTAGATCTCTTGAGTGGTAAACATATTCCACCAAGCCACGCACTTGATCTTATTCGTGGCAAAAACTTTCTGATGTTGATGGATTCTGCCTTAGAGGGTCACTTTTCAAAGGATGATGGAACTGAGTTGGTTCGTTTGGCCTCTCGTTGTTTGCAATACGAAGCTCGTGAGAGGCCAAATGCGAAGTCTCTTGTTACGTCTCTTATGTCACTTCAGAAAGAAACAGAGGTCCCCTCGTATGTTCTGATGGGTCTACGGCAAGATACTGCATCCTCAACAAAGCAATTGTTGTTAACACCTTTCGGTGAAGCTTGTTTGAGACTTGATCTTACTGCAATCCATGAAATATTGGAGAAGACTGGTTACAAGGACGATGAAGGCATTGCGAATGAGCTTTCCTTTCAATTGTGGACCAGCCAAATGCAGGAAACCTTGAATTTGAAGAAGCATGGCGATACTGCTTTTCGAGCTAAAGACTTTGTCACTGCCATTGACTGCTACACTCAATTCATAGAGGGAGGGACCATGGTGTCACCGACAGTGTATGCAAGGAGATGCTTATCATATTTAATGAATGAGATGGCACAAGAAGGTCTTGGGGATGCCATGCAAGCCCAAGTTGTATCACCAGAATGGCCTACTGCTTTGTATCTTCAAGCAGCTTGTCTTTTTAGCCTTGGAATGGAGAATGATGCTCAAGAGACTCTGAAAGATGGGACTAACATGGAAGCCAGAAAAAACAAAAACTGA 1476 0.4472 MGARCSKFSFCWFHSHLKPSVLESSDQENGEKHERKLWPSFGEFSLDQLKTATNGFSSENIVSEHGEKAPNVVYKAKLDNGQWIAIKRFNKFAWPDSRQFLEEAKQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVTSLMSLQKETEVPSYVLMGLRQDTASSTKQLLLTPFGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIEGGTMVSPTVYARRCLSYLMNEMAQEGLGDAMQAQVVSPEWPTALYLQAACLFSLGMENDAQETLKDGTNMEARKNKN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0995 491 SUPERFAMILY Protein kinase-like (PK-like) 35 320 IPR011009 -
Vra9g0995 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Vra9g0995 491 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
Vra9g0995 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
Vra9g0995 491 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Vra9g0995 491 SUPERFAMILY TPR-like 387 488 IPR011990 GO:0005515
Vra9g0995 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 - -
Vra9g0995 491 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0995 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0995 Vra-Chr9 12210107 12214159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0995 19 310 Glycoside Hydrolase AT3G07070 33.438 3.80e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Vra9g0995 PK_Tyr_Ser-Thr 2.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0995 - - gmx:100814477 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0995 9 12210107 12214159 Vra9g0995 9 12210107 12214159 ECH