Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0964 ATGGGTGCTTGTTGGAGCAGTGGGACGAAGGCTGTGAGCCCTTCCAGTGCAGGGTTCACTTCTAGAAGTGTGAGCAGAGAGGGCTATGACATCCATTCAAGTAGCAGGAACTCATCAGCCTCCATACCCATGACCCCTCGGAGTGAGGGTGAGATCTTACAATCTTCAAATTTGAAAAGCTACAGTTACAATGACCTAAGAATAGCAACAAAAAATTTCAGCCCAGACAATGTCTTAGGGGAAGGTGGATTTGGTTCAGTTTTTAAGGGTTGGATTGATGAACATTCGCTTTCTGTTACCAAGCCTGGTATAGGCATGGTTGTTGCTGTGAAGAAACTTAACCAAGAAGGGTTCCAGGGTCACAAGGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCCAATCTTGTCAAGTTGATAGGCTACTGCTTAGAGGATCAGCACAGGCTTCTAGTTTATGAATATATGCCAAAGGGCAGTGTGGAGAATCATCTATTCAGGAGGGGGTCTCATTTTCAGCAGCTTTCTTGGACATTAAGATTGAAAATATCCCTTGGGGCTGCTAGGGGTCTTGCTTTTCTCCATAACTCAGAAACTAAAGTCATATACAGAGACTTTAAGACTTCTAATATCCTCCTTGATACGAACTATAATGCCAGACTTTCTGATTTTGGGCTGGCCAGAGATGGACCCACTGGTGATAAGAGCCATGTTTCTACAAGGGTCATGGGAACACATGGATATGCAGCACCAGAGTATCTGGCAACAGGTCACCTGACTGCCAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTGGAAATGTTATCAGGAAGACGTGCCATAGACAAGAATCGGCCATCTGGGGAACAGTGCTTAGTTGAATGGGCAAAACCTTACCTTGCTAACAAAAGAAGGGTTTTTCGTGTAATGGATAGTCGTCTAGAAGGTCAGTATTCCCTCAACCAAGCTCAAAGAGCAGCCACTCTTGCTTTTCAGTGTCTTTCTGTAGAGCCCAAATACAGGCCAAACATGGATGAGGTGGTGAGAATATTGGGGCAACTACGTGAGTCAAATGATCAAGTGAAAAATGGTGATCATACTAAAAAGCATCGACTGAGTGGCTCTGCCTCTGGCCATGGCCACCCCAATGGACTCCCTTCATCTGCTAGCACAGGAAGTTCTGATGCTCCAAAAAAGTTTGCTTATCCAAGGCCTTCTGCTTCCTTTCTTTATGCTTAG 1251 0.4476 MGACWSSGTKAVSPSSAGFTSRSVSREGYDIHSSSRNSSASIPMTPRSEGEILQSSNLKSYSYNDLRIATKNFSPDNVLGEGGFGSVFKGWIDEHSLSVTKPGIGMVVAVKKLNQEGFQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDQHRLLVYEYMPKGSVENHLFRRGSHFQQLSWTLRLKISLGAARGLAFLHNSETKVIYRDFKTSNILLDTNYNARLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSGEQCLVEWAKPYLANKRRVFRVMDSRLEGQYSLNQAQRAATLAFQCLSVEPKYRPNMDEVVRILGQLRESNDQVKNGDHTKKHRLSGSASGHGHPNGLPSSASTGSSDAPKKFAYPRPSASFLYA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0964 416 PANTHER KINASE 1B 22 391 - -
Vra9g0964 416 MobiDBLite consensus disorder prediction 361 416 - -
Vra9g0964 416 SUPERFAMILY Protein kinase-like (PK-like) 39 354 IPR011009 -
Vra9g0964 416 MobiDBLite consensus disorder prediction 384 399 - -
Vra9g0964 416 ProSitePatterns Protein kinases ATP-binding region signature. 79 112 IPR017441 GO:0005524
Vra9g0964 416 Gene3D Transferase(Phosphotransferase) domain 1 159 381 - -
Vra9g0964 416 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0964 416 MobiDBLite consensus disorder prediction 1 51 - -
Vra9g0964 416 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Vra9g0964 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Vra9g0964 416 CDD STKc_IRAK 79 358 - -
Vra9g0964 416 Pfam Protein kinase domain 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0964 416 PANTHER OS01G0588500 PROTEIN-RELATED 22 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0964 Vra-Chr9 11674610 11678202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0964 34 363 Glycoside Hydrolase AT3G07070 46.041 2.58e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vra9g0964 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0964 - - gmx:100795058 744.191