Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0945 ATGGAGTTTGCATCTTCTTCTTTAACATCATCATCTTCATCCTTCTTAACATCAGAACCCCATTTCATACACGATGTCTTCATCAACTTTGGTGGAGAAGAAATCGGTCGAAGGTTTGTTTCTCATCTCCACTCTGTCCTTTTACAAGCTCAAGTCGAAACTTTGATTAGCCAGGAGAATCTGCACGAGGGAATGAAGCTGGAAGAGCATATGCGAGCGATAGGACACACTAAGATTACAATAATCGTTTTCTCCAAATCATACACTGAATCTGCTAGCTGTCTTCTTGAGCTTGAAAAAATAATTGAATGCCACGAAACATTTGGCCAAATAGTTGTGCCCGTATTTTACGAGATTGACCCATCGGATGTACGTTATCAGAAGGATGATTTTGGAAAAGCGTTGGAAGAAGCTGCTCACAAAAGCTATTCAGGAGAACAACTGAAACATGCGTTGTCCAAGTCGAGCCGTGCACTCACCACAACTGCTGGTATCCCTAGTTGTGATTTCAGAAATTTCAGACATGATGCTGAACTTGTGGAGCGAATTGTTAGCCGAGTTAAGACATTACTGGACTATAAAGACTTGTTTATTACCCAATATCCTGTTGGATTGGAGTCCCGCGTGGAAGACATGATTAAAGGGATTGAAAAACAATCTACCAAAGTGTGTATGATAGGGATATGGGGAATGGGAGGATCGGGTAAAACAACCATAGCCAAAGCCACCTACAATCGAATTTGTCGTGAATTCATTGGTAAGTGTTTTATAGAGAATATTAGTTATGCTTGGGATCCAGAAAATAAGAATGAATGGTATGTTGCTTTGCAAGAAAATCTTCTTTCTGATGTCCTAAAATCCAAGTTGAAGGTGAAAAGCGTTGGGATGGGAAGAACTATGATAGAGAACGGATTTTCTGAAAAAAAGTTACTCATTGTGCTTGATGATGTGAATGACTATGGCCAATTGGAAAACCTATGCGGGAGTCGTGAATGGTTCGGTCAAGGAACTGTCATAATCATTACAACTAGAAATATTAGCCTGTTGAAACGACGAGAAGTTAGTTATATTTATGAAACGCAACTTTTGAACGAAAATAAGTCACTTGAGCTTTTAAGTTGGCATGTCTTTGGAGAAGCAAAACCAAGAAAAGGATTGAATGAACTTGCAAGAGACATAGTTGCTTATAGTGGAGGGCTACCACTAGCTCTTGAGTTCCTTGGTTCCTATTTATGGAATAGGACAAAGGAAGAGTGGGAAACTGTATTGAGAAAATTACAAAGAATTCCCCCGGATAAACTTCTGAAAGTATTAAAAATAAGTTTTGACGATTTAAATGCTACAGAAAAGGACATATTTCTTGATGTATGTTGTTTCTTTATTGGCAAAGAAAGAGACTATGTCACAGAGATATTAAATGGCTGTGGACTATATGCTGATATTGGAATAATAATTCTCATAGAACGTGGCCTCATAAAAATTGAAGGGAACAACAAACTTCAAATGCACCCTTTGTTACGAGACATGGGAAGAGAAATTATTCATCAAGAATGCTCAGAGGAACCGGGGAAAAGGAGTCGATTGTGGTTGCAGGATGACGTAAAAGATGTACTGAAAGAGAAATCTGGGACAAGAGCTATCGAAGGATTGTCCCTGAAACTGCATTCCAGTAGTAGAGATTGCTTGGAAGCTTGTGCTTTCAAGGAAATGAAGAGACTAAGACTGCTACAACTTGATAATGTACAACTTAGTGGAGATTATGGGCACATTTCTAAACAACTGAGATGGATTTGTTGGCGAGGATTTCCTTATAAATACATTCCAATCAACTTTCATTTGGAAAATGTAATTGCAATTGATTTCAAGNATAGTCGTCTCCAACTAGTCTGGGAACAACCCGTGGTTTTAGAGCGATTAAAATTCCTTAATCTTAGTCACTCCAAGTACTTGAAAGAAACACCTGACTTTTCAGGACTACCAAGTCTTGAAAAACTCATTCTAAAAGATTGCCCAAATTTATGCGAAGTACACCAATCCATTGGACGTCTCAGGAATCTACTACTCATAAATTTGAAGGACTGCACAAGTCTAAGCTATCTCCCAGAAGAGGTATATGAGTTGAGATCTTTAAAAATTCTCATTCTCTCTGGTTGTTTAAAGTTTCCCCCTATAGATATAGCAAAGGTGAAATCCTTGGCAACTATAATTGCTGAAAACACAAAACCAAGCGCCCTTTGA 2238 0.3843 MEFASSSLTSSSSSFLTSEPHFIHDVFINFGGEEIGRRFVSHLHSVLLQAQVETLISQENLHEGMKLEEHMRAIGHTKITIIVFSKSYTESASCLLELEKIIECHETFGQIVVPVFYEIDPSDVRYQKDDFGKALEEAAHKSYSGEQLKHALSKSSRALTTTAGIPSCDFRNFRHDAELVERIVSRVKTLLDYKDLFITQYPVGLESRVEDMIKGIEKQSTKVCMIGIWGMGGSGKTTIAKATYNRICREFIGKCFIENISYAWDPENKNEWYVALQENLLSDVLKSKLKVKSVGMGRTMIENGFSEKKLLIVLDDVNDYGQLENLCGSREWFGQGTVIIITTRNISLLKRREVSYIYETQLLNENKSLELLSWHVFGEAKPRKGLNELARDIVAYSGGLPLALEFLGSYLWNRTKEEWETVLRKLQRIPPDKLLKVLKISFDDLNATEKDIFLDVCCFFIGKERDYVTEILNGCGLYADIGIIILIERGLIKIEGNNKLQMHPLLRDMGREIIHQECSEEPGKRSRLWLQDDVKDVLKEKSGTRAIEGLSLKLHSSSRDCLEACAFKEMKRLRLLQLDNVQLSGDYGHISKQLRWICWRGFPYKYIPINFHLENVIAIDFKXSRLQLVWEQPVVLERLKFLNLSHSKYLKETPDFSGLPSLEKLILKDCPNLCEVHQSIGRLRNLLLINLKDCTSLSYLPEEVYELRSLKILILSGCLKFPPIDIAKVKSLATIIAENTKPSAL* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0945 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 455 IPR027417 -
Vra9g0945 745 PRINTS Disease resistance protein signature 225 240 - -
Vra9g0945 745 PRINTS Disease resistance protein signature 304 318 - -
Vra9g0945 745 PRINTS Disease resistance protein signature 397 411 - -
Vra9g0945 745 PRINTS Disease resistance protein signature 705 721 - -
Vra9g0945 745 SMART till_3 23 158 IPR000157 GO:0007165
Vra9g0945 745 ProSiteProfiles TIR domain profile. 22 191 IPR000157 GO:0007165
Vra9g0945 745 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 729 IPR044974 GO:0006952
Vra9g0945 745 Gene3D Ribonuclease Inhibitor 533 741 IPR032675 -
Vra9g0945 745 Pfam NB-ARC domain 208 428 IPR002182 GO:0043531
Vra9g0945 745 SUPERFAMILY L domain-like 515 736 - -
Vra9g0945 745 Gene3D - 197 357 IPR027417 -
Vra9g0945 745 SUPERFAMILY "Winged helix" DNA-binding domain 432 539 IPR036390 -
Vra9g0945 745 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 141 IPR035897 -
Vra9g0945 745 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 28 729 - -
Vra9g0945 745 Gene3D - 20 196 IPR035897 -
Vra9g0945 745 Pfam TIR domain 24 187 IPR000157 GO:0007165
Vra9g0945 745 Gene3D - 362 446 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0945 Vra-Chr9 11276695 11306786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0945 203 738 WRKY Transcription Factor Family AT5G45050 32.504 6.80e-79 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0945 - - vun:114165946 1053.51