Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra9g0935 | ATGAAGGGGATGATTTTGTGTATTGTTTATTTATCAAAGCCTGAAATCAAGCCCACCGAATGTCTTACTGGTGTCTTAGATGCTAATTACACAAAGCGCACCTTACAGATACACAGGCAAGAAACAGTGATTTCCTTTAATGATGAAGATTGGCAGGAGATAATATCACATTTGGCAGGTGGAGACATGGTAGAGATTTTTGTGGCTTTTGGTCATGACTTGGTAGTCAAGAAAACGATTGTCTATCTGATTTATACTGAAATGGATGAAGCTGAACAAGTGAAGAAAATCGTCCAGGGAGTTTTGGCAGCGCTAGACAACACATCATTATCTATTACCCAATTTCCAGTTGGCTTAGAATCTCGTGTGAAAGAAGTGATTATGTTTATTATAAATCAATCAAGCAAAGCTTGCAAAATAGGGATATGGGGGATGGGAGGATCAGGTAAGACAACCACTGCGAAATCCATCTACAATCAAATTCGTCGTACATATGACTATAGAAGTTTCATCGAAAACATTAGACAAGTTTGTGAACAGGACAGTAAAGGGTATATTCATTTTCAAGAACAGCTTCTTTTAGATGTCCTAAAATCAGAAGTTAAGGTACATAGTACAGCAGCAGGGACCACTTTGATTGAGGAAAGACTTCGTGGAAAAAGCACACTCGTTGTACTTGATGATGTGACTAAGTTGGAGCAAGTGCATGCCCTGTGTGGAAATCGTAAATGGATAGGCTCAGGAAGTGTGTTTATTGTTACATCTAGAGACAAACGATTACTTCATTTACTAGAAGTTGATTACATTTATAAAGTGGAGGAAATGAATGAAAGTGAGTCTCTTGAGCTTTTTAGTTGGCATGCTTTTAGGGAAGTAACTCCGACACATGATTTCATTGAACTCTCAAGAAATGTAGTTTCTTATTGCGGAGGACTACCTCTAGCCCTTGAAGTTCTTGGTTCTTACTTGCACAAGAGAACCAAACAGGAGTGGAGAAGTGTGTTATCAAAGCTAAGAATAATTCCCAATGATCAAGTTCAGAAGAAATTGAGAATAAGCTTTGATGGTTTAGAGGATCAGATGGAAAGGGATATATTTCTTGATATTTGTTGTTTCTTTATTGGAAAAGAGAGAGGCTATGTTACGGAGATACTGAATGCCTGTGGACTGCATGCTGATATTGGAATAACAGTTCTTATAGAGCGTAGTCTGGTGAAAGTTGAAGAGAATAATAAACTTGGAATGCATGATTTGGTACGAGACATGGGAAGAGAGATTATTCGTCACAGTTCACCAAAGGATCCTGGGAAGCGCAGCCGATTGTGGTTTCATGAGGATGTACTAGATGTACTGACAAATAATACTGGGACAGAAGCCATTGAGGGATTGGCATTCAAATCGCATGGAACTGGTAGAGATTCCTTTGAAGCAAATGCTTTTAAGGAAATGAAAAGATTGAAACTGTTGAAACTTCATTCTGTACAACTCACTGGATCTTTTGGGCATCTTTCTAAGCAGTTGAGATGGATCTGTTGGCAAGGATTTCCTCTGAAATACATACCTGTAAACTTTCATCTAGGAAGTGTAGTTGCGATAAACTTAAAACACAGTCATCTTAAACTAGTCTGGAAGGAAAGTCAGTTGTTGGAGTGGCTAAAAATCCTCAATCTTAGTCATTCCAAAAACTTGACCATCACCCCAGACTTTTCTAAACTGCCTAATCTTGAGAAACTCATTCTCAAAGATTGTCCACGTTTGTACAAACTGCACCAGTCCATTGGAGATCTCTGCAAGCTTCTTCTGCTAAATTTGAAGGACTGTACAAGTCTTAGCAATCTGCCAAGGAGGACCTATAAGTTGAAATCTGTGAAAACTCTAATCCTTTCTGGTTGTTTGAAGATGGACAAATTGGATGAAGACATAGTGCAGATGGAATCCTTGACTACTTTAGTCGCGGAAAATATTGCTGTGAAACAAATTCCCTTTTCCATAGTAAGATCAAAAAGCATTGGATATATATCACTGTGTGGACATAAAGGATTGTCACGTAATGTTTTTCCATCTATCATTTGGTCTTGGATGTCACCAAAAATAAATCCTCTATCCGGTATTTACCCATGTTGGAGCATGTCATCGTCTCTAACCTCCATAGATGTGCAGAGTAACAATTTGGGTGATCTAGCATCAACGCTTACAAGTCTTTCAAAACTTCGTAGTGTTTTATTGCATTGTGACACGGAGTTTCAGCTATCTAAAGAATTAAGAAGAATTCTGGATGATGTATATGACGTAAGTTCAATTAAATTAGAAATAAGGTCAAATGAATCGCAGATAACAAACCAGTCGTTGAGGCCATATTTGATTGGAATAGGACGCTACCATGAAGTTTTCAATACTCTCAACAAGAGCATATCAGAGGGATTCACTACCAATGATTGTGATGTTTTTCTTCCGGGTGACAACTATCCACTTTGGTTGACTCATACAGGTGAAGGACATTCCGTTCTTTTCAGAGTCCCCGAGGATCGTAATTGTCTCATGACTGGAATGTTTTTGTGTGTTGTTTATTCATCACCCCTTGAAAGAGTTGCAAAGGAATGCCTTCTTAGTGTCTTGATAGTTAATTACACAAAGTGCACCATTCAAATATACAAACGAGACACAGTAATTTCTTTCAATGAAGAAGATTGGAAAGACATAATATCACAGCTAGGATTTGGTGACCATGTGGAGATTGTCGTAACTTTTGGGCATGAATTGATTGTCATGAAGATGGCTATCTATCTATTATATACTGAATCAACTGACATGCCAATAAATCCTTCTTTGGAACCAAAGGAAAATGCCCTCCTTATATTCCTAAAGAGAATTATGGAGTTCGCTTCTTCTTCATCATCGTCATCTTCATCTTTCCTAAAATCAGAACCCCATTTCATATACGACGTGTTCATCAACTTTGGGGGAGAAGACATCGGTAGAAGGTTCCTTTCTCATCTTCATTATGCCCTTTTACAAGCTCAAGTCAAAATTTTTATTAGCGAGGAAAATGGTCAAGAGGGAACGAAGATGGAAGAACACCTGCGAGCAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAAACATATGCTGAATCTACCTGCTGTCTTCTTGAGCTTGAAGAAATCATTGAATGCCTCAAAACATTTGGCCAAATAGTTTTGCCCGTATTTTACGAGATTGATCCATTGGATGTACGTGATCAGACGAACGATTTTGGAAAAGCGTTGGGACAAACTGCAAACAAAAGTTATTCAGGAGAAGAACTGGAACATGCGTTGTCCAGGTGGAGCCGTGCACTCGCCATAGCTTCAGGTATCACTGGTTGGGATCTCAGAAATTTCAGGCATGATGCTGAATTTGTGGAAGTAATTGTTAATCGCGTTCAGACATTACTGGACTATAAAGACTTAGTTATTACCCAATTTCCTGTTGGATTAGAGTTTCACGTGGAAAAGGTGATTGAATGTATTGAGAATCATTCCACCAAAGTGTGTATGATAGGGATATGGGAAATGGTAGGATCGGGTAAAACTACCATAGCCAAAGCCATCTATAATCGAATTTATCATTTATTCATTGGCAAGAGTTTTGTTGAAAATCTTAGAAAAGTTTGGGAACCAGTAGATAGATGGCATCTTCGTTTGCAAGAGGAATTTCTTTACGATGTCCTAAAATCCAAGTTCAGATTGCAAACCACTTGGATGGGAAGAATTATGATCGAGAAGGAACTTTCTCGAAAAAAGTTGCTCATTGTGCTCGATTGGTTCGGTAAAGGAACTGCGATAATCATTACAACTAGAGATGTTCACTTGCTGAACCGACTCAAACTTAATTATGTTTATAGAATGTCTGATATGAAGGAAAATGAGTCCCTTGGTTGTCATGGCTTTAGTGAAGCAAAACCAAGAAAAGACTTGAATAAACTTGTAAGAAACATAGTTGTTTATTGTGGAGGACTACCACTAGCTCTAATCTTTGGGCGACTGGTGTTGTCTGTACAGAGATCGTCTCTCACTCTGTTTCATTATTGCTTTCTCTTCCAACACTTCATTACGTCGTCAATTCCTTCCATGGAATTAGCCTCTTCAACTTTCAAACCACAGATGTGTGACGTGCTCATCAACTTCACTGGAGAAGACATCCGCAGAAAATTTATTTCTCATCTCGATTCTGCCCTCTCTGCTGTTAGGCTCACCACTTTCCTTCACGAAGAGACTGCAGTGAATGGCATGCACATCCAACAACCCATTCTCAATATGTGTCGAGCAACAATTGTTGTTTTCACCAAAACATATTCTCAATCTGCATGGTGTCTTCATGAGCTCCAACAAATCATCAAATGGCACGAAACTTATTCCCGGCATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAATCCTTCAAAGCAACTGCACAACAAACATTTTCAGGAGAACAACTTGAGCATGGCATGTTGAAGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACATAATTGTTAAGAGTGTTCTCATTTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTCGATTACAATCCCACGTGAAAGATATGATTCAAGTAATAAAAAATAAATCCACAGAAGTTTGTATAATAGGGATATGTGGAGAGGAAGGATCTGGTAAAACCACCCTTGCCAAAGCCGTCTACCATCAAGTTCATAGTACATTCACATATAAAAGTTTTATTGAAGATATTGCACAAGTTAGTCAAACAAGAGGGCTTGTTGGTTTACAAGAACAACTTCTTTCGGATATCCTAAAAACAAAGATAAAGTTACATAGCATTCAGATGGGAATCAGTATGATTCGGGAAAGACTTTCTGGGAAGAGAATGCTCATTGTACTTGACGGAACAAATGAGTATGATCCAATAGGCCTATGGAATAGTCATGTATGGTTCGGTAAAGGAACTGTAATGATAGTTACAACAAGAGAAGAAGGCCTTCTAAGGATACCTGAAGTTGATTCGGTTTTGTTGATAGAGTTACTGAACGCGAACGAGTCTCTTGAGCTTCTTAGTTGGCATGCATTTAGAGAAGCAAAACCAAGAGAAGAATACAATGACCTTGCAAAAAGAGTAGTTGCTTGTTGTGGAGGACTACCTCTAACTCTTGAAGTCATTGGAAGTAGTTTATTTGAAAGGCCGAAAGAAGAATGGAAGAGTATACTGTTAGAATTAGAGAAAATTCCCAAGCATGATGTTCATCAGAAATTGAAAATAAGCTTCCAAGGTTTACGAAATGAAATGGAAAAAAATTTATTCCTTGATGTATGTTATTTCTTTGTTGGTAAAGGCAGAACCTATGTTACACAGATCCTAAATGGATGTGGGGTAGATGCTGATAGTGGAATAAGAAATCTCATAGAGGGTAGCCTCATACAAGTTAAAAGGAACAACAAATTAGGAATGCAACCGTTGCTACAAAAAATGGGAAAAGAAATTGTTCTTGAAATTCTAGAAAGGACACTTCAGAACAACCCTCAACTACGGTTTCGTCTGGATGAAAATTATGTAGTGTCAGATAATACTCTCTTTTCATCACAGCAGACAAAAGTCATTCAGATATTGCCTAGTAAACTCTTTTTAACCAGAACAGATTTGTTAGAACCTTGTCGAGCAAAGGTATCAGACACATCAAGAATATTTGAACTCGTTGAACATTCGAATTCTGATGAGTACCTTTCCAAGAAACTAAGATGGATCAGTTTACAAGGGTTTCCTTCAAAATACCTACCTAACGACTTTTATCTGCACGATTCAATAGCCATTGATTTAAAGCACAGTTCTCTTCGATTCGTCTGGAAACAACCCCAGGTTTTGCCATGGCTTAAAGTTTTGAATCTTAGTCACTCCAAGTACTTGAGAAAAACTCCTGAATTTTTGATAAGTGTGAAAAATAAATATTTTTACACTTATAAATTACCTTAA | 6081 | 0.3815 | MKGMILCIVYLSKPEIKPTECLTGVLDANYTKRTLQIHRQETVISFNDEDWQEIISHLAGGDMVEIFVAFGHDLVVKKTIVYLIYTEMDEAEQVKKIVQGVLAALDNTSLSITQFPVGLESRVKEVIMFIINQSSKACKIGIWGMGGSGKTTTAKSIYNQIRRTYDYRSFIENIRQVCEQDSKGYIHFQEQLLLDVLKSEVKVHSTAAGTTLIEERLRGKSTLVVLDDVTKLEQVHALCGNRKWIGSGSVFIVTSRDKRLLHLLEVDYIYKVEEMNESESLELFSWHAFREVTPTHDFIELSRNVVSYCGGLPLALEVLGSYLHKRTKQEWRSVLSKLRIIPNDQVQKKLRISFDGLEDQMERDIFLDICCFFIGKERGYVTEILNACGLHADIGITVLIERSLVKVEENNKLGMHDLVRDMGREIIRHSSPKDPGKRSRLWFHEDVLDVLTNNTGTEAIEGLAFKSHGTGRDSFEANAFKEMKRLKLLKLHSVQLTGSFGHLSKQLRWICWQGFPLKYIPVNFHLGSVVAINLKHSHLKLVWKESQLLEWLKILNLSHSKNLTITPDFSKLPNLEKLILKDCPRLYKLHQSIGDLCKLLLLNLKDCTSLSNLPRRTYKLKSVKTLILSGCLKMDKLDEDIVQMESLTTLVAENIAVKQIPFSIVRSKSIGYISLCGHKGLSRNVFPSIIWSWMSPKINPLSGIYPCWSMSSSLTSIDVQSNNLGDLASTLTSLSKLRSVLLHCDTEFQLSKELRRILDDVYDVSSIKLEIRSNESQITNQSLRPYLIGIGRYHEVFNTLNKSISEGFTTNDCDVFLPGDNYPLWLTHTGEGHSVLFRVPEDRNCLMTGMFLCVVYSSPLERVAKECLLSVLIVNYTKCTIQIYKRDTVISFNEEDWKDIISQLGFGDHVEIVVTFGHELIVMKMAIYLLYTESTDMPINPSLEPKENALLIFLKRIMEFASSSSSSSSSFLKSEPHFIYDVFINFGGEDIGRRFLSHLHYALLQAQVKIFISEENGQEGTKMEEHLRAIAASKIAIIVFSKTYAESTCCLLELEEIIECLKTFGQIVLPVFYEIDPLDVRDQTNDFGKALGQTANKSYSGEELEHALSRWSRALAIASGITGWDLRNFRHDAEFVEVIVNRVQTLLDYKDLVITQFPVGLEFHVEKVIECIENHSTKVCMIGIWEMVGSGKTTIAKAIYNRIYHLFIGKSFVENLRKVWEPVDRWHLRLQEEFLYDVLKSKFRLQTTWMGRIMIEKELSRKKLLIVLDWFGKGTAIIITTRDVHLLNRLKLNYVYRMSDMKENESLGCHGFSEAKPRKDLNKLVRNIVVYCGGLPLALIFGRLVLSVQRSSLTLFHYCFLFQHFITSSIPSMELASSTFKPQMCDVLINFTGEDIRRKFISHLDSALSAVRLTTFLHEETAVNGMHIQQPILNMCRATIVVFTKTYSQSAWCLHELQQIIKWHETYSRHVLPVYYEIQPSDVRLQKGDFGKSFKATAQQTFSGEQLEHGMLKWSHALTKAANFFGWDESNYRSDAELVDIIVKSVLILPVLSATKFPVRLQSHVKDMIQVIKNKSTEVCIIGICGEEGSGKTTLAKAVYHQVHSTFTYKSFIEDIAQVSQTRGLVGLQEQLLSDILKTKIKLHSIQMGISMIRERLSGKRMLIVLDGTNEYDPIGLWNSHVWFGKGTVMIVTTREEGLLRIPEVDSVLLIELLNANESLELLSWHAFREAKPREEYNDLAKRVVACCGGLPLTLEVIGSSLFERPKEEWKSILLELEKIPKHDVHQKLKISFQGLRNEMEKNLFLDVCYFFVGKGRTYVTQILNGCGVDADSGIRNLIEGSLIQVKRNNKLGMQPLLQKMGKEIVLEILERTLQNNPQLRFRLDENYVVSDNTLFSSQQTKVIQILPSKLFLTRTDLLEPCRAKVSDTSRIFELVEHSNSDEYLSKKLRWISLQGFPSKYLPNDFYLHDSIAIDLKHSSLRFVWKQPQVLPWLKVLNLSHSKYLRKTPEFLISVKNKYFYTYKLP* | 2027 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra9g0935 | 2026 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1542 | 1807 | IPR027417 | - | |
| Vra9g0935 | 2026 | PRINTS | Disease resistance protein signature | 139 | 154 | - | - | |
| Vra9g0935 | 2026 | PRINTS | Disease resistance protein signature | 216 | 230 | - | - | |
| Vra9g0935 | 2026 | PRINTS | Disease resistance protein signature | 309 | 323 | - | - | |
| Vra9g0935 | 2026 | PRINTS | Disease resistance protein signature | 547 | 563 | - | - | |
| Vra9g0935 | 2026 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 975 | 1124 | IPR035897 | - | |
| Vra9g0935 | 2026 | ProSiteProfiles | TIR domain profile. | 1383 | 1550 | IPR000157 | GO:0007165 | |
| Vra9g0935 | 2026 | SUPERFAMILY | L domain-like | 415 | 744 | - | - | |
| Vra9g0935 | 2026 | SMART | till_3 | 1384 | 1524 | IPR000157 | GO:0007165 | |
| Vra9g0935 | 2026 | SMART | till_3 | 979 | 1121 | IPR000157 | GO:0007165 | |
| Vra9g0935 | 2026 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 109 | 369 | IPR027417 | - | |
| Vra9g0935 | 2026 | ProSiteProfiles | TIR domain profile. | 978 | 1147 | IPR000157 | GO:0007165 | |
| Vra9g0935 | 2026 | Gene3D | Ribonuclease Inhibitor | 475 | 784 | IPR032675 | - | |
| Vra9g0935 | 2026 | Gene3D | - | 103 | 269 | IPR027417 | - | |
| Vra9g0935 | 2026 | Gene3D | - | 1150 | 1295 | IPR027417 | - | |
| Vra9g0935 | 2026 | Gene3D | - | 1548 | 1706 | IPR027417 | - | |
| Vra9g0935 | 2026 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 98 | 931 | - | - | |
| Vra9g0935 | 2026 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 3 | 84 | - | - | |
| Vra9g0935 | 2026 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 982 | 1342 | - | - | |
| Vra9g0935 | 2026 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 1387 | 2011 | - | - | |
| Vra9g0935 | 2026 | Gene3D | - | 973 | 1149 | IPR035897 | - | |
| Vra9g0935 | 2026 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 982 | 1342 | IPR044974 | GO:0006952 | |
| Vra9g0935 | 2026 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 3 | 84 | IPR044974 | GO:0006952 | |
| Vra9g0935 | 2026 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 98 | 931 | IPR044974 | GO:0006952 | |
| Vra9g0935 | 2026 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 1387 | 2011 | IPR044974 | GO:0006952 | |
| Vra9g0935 | 2026 | SMART | AAA_5 | 136 | 279 | IPR003593 | - | |
| Vra9g0935 | 2026 | SMART | AAA_5 | 1578 | 1715 | IPR003593 | - | |
| Vra9g0935 | 2026 | Pfam | TIR domain | 980 | 1143 | IPR000157 | GO:0007165 | |
| Vra9g0935 | 2026 | Pfam | TIR domain | 1387 | 1552 | IPR000157 | GO:0007165 | |
| Vra9g0935 | 2026 | Gene3D | - | 1382 | 1547 | IPR035897 | - | |
| Vra9g0935 | 2026 | Gene3D | - | 1713 | 1797 | IPR042197 | - | |
| Vra9g0935 | 2026 | Gene3D | - | 274 | 358 | IPR042197 | - | |
| Vra9g0935 | 2026 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 1378 | 1527 | IPR035897 | - | |
| Vra9g0935 | 2026 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1152 | 1341 | IPR027417 | - | |
| Vra9g0935 | 2026 | Pfam | NB-ARC domain | 120 | 339 | IPR002182 | GO:0043531 | |
| Vra9g0935 | 2026 | Pfam | NB-ARC domain | 1564 | 1782 | IPR002182 | GO:0043531 | |
| Vra9g0935 | 2026 | Pfam | NB-ARC domain | 1163 | 1340 | IPR002182 | GO:0043531 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra9g0935 | Vra-Chr9 | 11165161 | 11181316 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vra9g0935 | 117 | 630 | WRKY Transcription Factor Family | AT5G45050 | 33.889 | 6.24e-75 | 273 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra9g0935 | - | - | vra:106773334 | 3985.65 |