Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0932 ATGGCGTCTTCAAATCCTTCCATAGAATTCGGCTCTTCAACTTCCAAACTCCCACAGAAGTACGATGTGCTCATCAACTTTAATGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTATGCTCTCTCTACTGTTGGGCTCACCACTTTTCTTCACGAGGAGAATGCAGTGAAAGGCATGCACATCCAACAACCTATTCTGAATCTGTGTCGGGTAGCAATAGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATGAGCTCCAACAAATCATCAAATGGCAAGAAACTTATTCCCGACATGTTCTGCCCGTATATTACGAAATTCAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAATCATTCAAAGCAACTGCACAAGAAACATTTCCATGGCAACAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAACTTTTTTGGATGGGATGAGAGAAATTACAGGAGTGATGCTGAACTTGTGGACATAATTATTAAGGGCGTTGTTAATTTACCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGCGTGAAAGATGTGATTCAAATTATAAAAAATAAATCCACGGAAGTTTGTGTAATAGGAATATGGGGAGAGGGAGGGTCAGGTAAAACCACCCTTGCCAAAGCTATCTACCATCAACTTCATGGTACATTCACAGAGAAAAGTTTTATTGAAGATATTTCACAATTTAGTCAAACAAGAGGGCATGTTCATTTACAAGAACAACTACTTTCCGATGTCCTAAACACAAAGATAGAGATACGTAGCATTGAGATGGGAAAATGTATGATTAGGGAAAAACTTTCTGGGAAAAAATTGCTCATTGTACTTGACGATACTAAATATGATCCATTATTAGACCTATGCGATAGTCATGTATGGTTAGCTAAAGGAAGTGTCATAATAATTACAGCAAGGGAAGAAAGCCTACTAAGAATACCTGAAATTGGTTCTGTTATTTCGATAAATCTGTTGAGCACAAATGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTCAGAGAAGCAAAACCAGAAGAAGAATACAATGACCTTGCAAAAAGCGTAGCTGTTTGTTGTGGAGGACTACCTCTTGCTCTTGAAGTCATTGGAAGTAGGTTATTTGAAAAAACGAAAGAAGAATGGAAGAGTGTATTGTTAGAATTAAAGGAAATTCACAACCATGATGTCCATCGGAAATTGAAAATAAGCTTTGATGGTTTAAGCAATGAAATGGAAAAAGATTTATTCCTTGATGTATGTTGTTTCTTTGTTGGTAAAGGCAGAGCCTTTGTTACAAAGATCCTAAACGACTGTGGAGTAGATGCTGATAGTGGAATAAGAATTCTCATAGAGCGTGGCCTCATACAAGTGAAAAAGAACAACAAATTAGGAATGCAACCGATGCTACAAAAAATGGGAAGAAAAATTATTCGTCAAATTTCAGGAAAGGAACTTGGGAAGAACCCTCAACTATGGTTTGGCCAGGATGCAGAATATGAACTGTTAGAGAATACTCTGTTCTCATCACAGCAGACAAAAGTCATTCGGAAATTGCCTTTGAAAATGTTTTTAATAGCCACAAGAGAGTTATTCGAACATCCTTCAGTAGTAAGAGACAAATCAAGACTTCTGAAACTCACTAGAGATTTTGGGAAACTGAGATGGATCAGTTTGCAAGGGTTTTCTTCAGAATACCTACCTGAAGACTTTTATCTGCAAGATGCAATGGTGATTGATTTAAAACACAGTCTTCTTCGATTCGTCTGGAAAGAACCTCAGGTTTTGATGTGGTTAACAGTCCTTAATCTTAGTCACTCCAAGTACTTGAGAGAAACTCCAGACTTTTCTGGACTACCTCGTCTTGAACAGCTCATTCTCAAAGATTGTTCAAGATTGCGCAAAGTACACCATTCTATTGGATGTCTCAACAATCTTGTATTGCTAAATTTGAAGGACTGTACAAGTCTAAGCAATCTCCCAAGAGAGGTATATAAGTTGAAATCTTTAACCACTCTCATTCTCTCTGGTTGTTTGAAGATTGACCCATTGGAAAAATATATAGTGGAAATGGAATCCTTGATAATTCTAATTGCTGAAAATGCAGCTGTGAAACAAGTGCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATTTCTACGAGGTTTTGAGGGATTGTCATGTAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAATCATGAATCCCTTATCTTATATTCATTCGTTTTGCATGGATATTGAGGATAATGGTTGGAATGATCGTTTGCCATTGCTTAGCACCCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATGTAAGCAAGTTGAAACTTTTCTGATCGAATATGGAGTAAATGTTACAAAATCAGGAATTTCACAGAAGAACTTGAAGTATTCTTTGATTGGTGTTGGAAGATGCAAGGATTTCTTCGATGCTGTCAGTGATAGCATTTCTCAGGTATTTGCAAGCAATGAGTCCCGTGATGTTTCTCTCCCAGGCGATAATGATCCTTATTGGTTGGGCCACATGGGTAAGGGTCATTCTGTTTCTTTCACTGTGCCTCGAGATCGTGACTTGAAGGGAATGGCTTTGTGTGTCATTTATTTATCAACCCCTGAAATTGTGGCAACTGAATGTCTTAGAAGTGTCTTAATTGTTAATTACACAAAGTGTACATTACAGATACATAACCATGGCACGGTAATTTCCTTTAATGATATAGATTGGCAAGGTATAATACCAAATTTAGGATCAGGAGACAAGGTGGAGATTTGTGTGACTTTTGCTCATGAATTGGTAGTCGAGAACATAGTTGTTTATCTGATATGTAGTGAATTAAACGACTCACAAAAGGAGCCTGCCCCAAAGAAAAATTCCCTAATTAGATTTATAAAGAAAGTTGTAATGTGA 3036 0.3798 MASSNPSIEFGSSTSKLPQKYDVLINFNGEDIRRKFVSHLDYALSTVGLTTFLHEENAVKGMHIQQPILNLCRVAIVVFTKTYSQSAWCLHELQQIIKWQETYSRHVLPVYYEIQPSDVRLQKGDFGKSFKATAQETFPWQQLEHGMSRWSHALTKAANFFGWDERNYRSDAELVDIIIKGVVNLPVLSATKFPVGLQSRVKDVIQIIKNKSTEVCVIGIWGEGGSGKTTLAKAIYHQLHGTFTEKSFIEDISQFSQTRGHVHLQEQLLSDVLNTKIEIRSIEMGKCMIREKLSGKKLLIVLDDTKYDPLLDLCDSHVWLAKGSVIIITAREESLLRIPEIGSVISINLLSTNESLELLSWHAFREAKPEEEYNDLAKSVAVCCGGLPLALEVIGSRLFEKTKEEWKSVLLELKEIHNHDVHRKLKISFDGLSNEMEKDLFLDVCCFFVGKGRAFVTKILNDCGVDADSGIRILIERGLIQVKKNNKLGMQPMLQKMGRKIIRQISGKELGKNPQLWFGQDAEYELLENTLFSSQQTKVIRKLPLKMFLIATRELFEHPSVVRDKSRLLKLTRDFGKLRWISLQGFSSEYLPEDFYLQDAMVIDLKHSLLRFVWKEPQVLMWLTVLNLSHSKYLRETPDFSGLPRLEQLILKDCSRLRKVHHSIGCLNNLVLLNLKDCTSLSNLPREVYKLKSLTTLILSGCLKIDPLEKYIVEMESLIILIAENAAVKQVPFSIVSSKSIGYIFLRGFEGLSCNLFPSIIRSWMSPIMNPLSYIHSFCMDIEDNGWNDRLPLLSTLANLRSVLVQCDTEFQLCKQVETFLIEYGVNVTKSGISQKNLKYSLIGVGRCKDFFDAVSDSISQVFASNESRDVSLPGDNDPYWLGHMGKGHSVSFTVPRDRDLKGMALCVIYLSTPEIVATECLRSVLIVNYTKCTLQIHNHGTVISFNDIDWQGIIPNLGSGDKVEICVTFAHELVVENIVVYLICSELNDSQKEPAPKKNSLIRFIKKVVM* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0932 1011 Gene3D Ribonuclease Inhibitor 565 732 IPR032675 -
Vra9g0932 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 984 IPR044974 GO:0006952
Vra9g0932 1011 SUPERFAMILY "Winged helix" DNA-binding domain 421 522 IPR036390 -
Vra9g0932 1011 SUPERFAMILY L domain-like 567 816 - -
Vra9g0932 1011 SMART till_3 20 160 IPR000157 GO:0007165
Vra9g0932 1011 Pfam NB-ARC domain 200 416 IPR002182 GO:0043531
Vra9g0932 1011 Gene3D - 18 185 IPR035897 -
Vra9g0932 1011 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 984 - -
Vra9g0932 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 443 IPR027417 -
Vra9g0932 1011 Gene3D - 349 433 IPR042197 -
Vra9g0932 1011 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Vra9g0932 1011 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 163 IPR035897 -
Vra9g0932 1011 Pfam TIR domain 20 182 IPR000157 GO:0007165
Vra9g0932 1011 Gene3D - 186 340 IPR027417 -
Vra9g0932 1011 PRINTS Disease resistance protein signature 217 232 - -
Vra9g0932 1011 PRINTS Disease resistance protein signature 292 306 - -
Vra9g0932 1011 PRINTS Disease resistance protein signature 384 398 - -
Vra9g0932 1011 PRINTS Disease resistance protein signature 665 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0932 Vra-Chr9 11130796 11134683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0932 5 735 WRKY Transcription Factor Family AT4G12020 26.999 3.32e-57 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0932 - - vun:114165123 1326.23