Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0931 ATGAGGTTATCAATTCCTTCCATGGAACTTGCCTCATCAGTTTCCAAACTCCCACGGATGTACGACGTTCTCATCAACTTCACCGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTATGTCCTCTCTTCTGTTGGATTAACTACTTTCCTTCAGCACGACAATGCAGTGCAGCCAAAACACATCCAAGAGCCTATTCTGAATCTGTGTCGAGTAGCAATTGTTGTTTTCACCGAAACATATTCTCGATCTGCTTGCTGTCTTCATCAGCTCCAACAAATCATTGAATGGCACGAAACTTATGGCCGACATGTTTTGCCCGTATATTACGAAATTCAGCCATCCGATGTACGTCTTCAGAAGGGTGACTTTGGGAAAGCCTTCAGAGAAACTGCACATCAAACATTTTCAGCACAAGAACTGGAACATGGCATGTCCAGGTGGAGTCACGCAATCACCAAAGCTGCAAATTTCTTTGGATGGGATGATTGCAATTACAGGAGTGATGCTGAACTAGTGGACACAATTGTTAGGAGCGTTCTTAATTTACCAGTCTTGTCTGCTACACAATTACTTTCTCTCGCGGAAGAAGTGATTCAAATTATAAAAAATAAATCAACGGGACTTTGTAGGATAGGGATATGTGGAATGGGAGGATCGGGTAAAACCACCCTTGCCAAAGCCATTTATAGTCAAATTCATGGTACATTCGTGGAGAAAAGTTTTGTTAAAGATATTTCAGAAGTTAGTCGGAGGAGAGGGCCTGTACATTTACAACGACAGCTTCTTTCAGATGTTCTGAAAACAAAGGTAGAGATACATAACGTTGAAATGGGAAGAAGTATGATTCTGGAAAGACTTTATCGGAAAAGGGTGCTCATTGTACTTGACGATGTGAATGAACATTGTCCATTAGACCTATGGGAAAGTAGGGGATGGTTCGGTGAAGGATCTGTAATAATCATTACAACAAGAGATGAAGACCTGCTAAGGAAACATGAAGTTCGTTCTGTTTTTCGGGTAGATCTAATGAATGAAAACAAGTCCCTTGAACTTCTTAGTTGA 1071 0.4108 MRLSIPSMELASSVSKLPRMYDVLINFTGEDIRRKFVSHLDYVLSSVGLTTFLQHDNAVQPKHIQEPILNLCRVAIVVFTETYSRSACCLHQLQQIIEWHETYGRHVLPVYYEIQPSDVRLQKGDFGKAFRETAHQTFSAQELEHGMSRWSHAITKAANFFGWDDCNYRSDAELVDTIVRSVLNLPVLSATQLLSLAEEVIQIIKNKSTGLCRIGICGMGGSGKTTLAKAIYSQIHGTFVEKSFVKDISEVSRRRGPVHLQRQLLSDVLKTKVEIHNVEMGRSMILERLYRKRVLIVLDDVNEHCPLDLWESRGWFGEGSVIIITTRDEDLLRKHEVRSVFRVDLMNENKSLELLS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0931 356 Pfam TIR domain 21 183 IPR000157 GO:0007165
Vra9g0931 356 Pfam NB-ARC domain 198 356 IPR002182 GO:0043531
Vra9g0931 356 PRINTS Disease resistance protein signature 213 228 - -
Vra9g0931 356 PRINTS Disease resistance protein signature 288 302 - -
Vra9g0931 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 356 IPR027417 -
Vra9g0931 356 SMART AAA_5 210 351 IPR003593 -
Vra9g0931 356 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Vra9g0931 356 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 356 IPR044974 GO:0006952
Vra9g0931 356 SMART till_3 20 160 IPR000157 GO:0007165
Vra9g0931 356 Gene3D - 18 187 IPR035897 -
Vra9g0931 356 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 356 - -
Vra9g0931 356 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 163 IPR035897 -
Vra9g0931 356 Gene3D - 188 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0931 Vra-Chr9 11128322 11130286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0931 21 355 WRKY Transcription Factor Family AT4G12020 28.696 1.21e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0931 - - vra:106773914 711.449