Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra9g0929 | ATGGAATTTGCGTCTTCATCATCCAAACTCCCACGGAAGTACGATGTGCTCATCAGCTTCACTGGAGAAGACATCCGCAGGAAATTTGTTTCTCATCTCGATTCTGTCCTCTCTTCTGTTGGATTAACTACTTTCCTTCAGCACGACAATGCAGTGCAGCCAAAACACATCCAAGAGCCTATTCTGAATCTTTGTCGGGTAGCAATTGTTGTTTTCACCGAAACCTATTCTCAATCTGCTTGCTGTCTTCATCAGCTCCAACAAATCATCGAATGGCACGAAACTTATGGCCGACATGTTTTGCCCGTATATTACGAAATTCAGCCATCCGATGTACGTCTTCAGAAGGGTGACTTTGGAAAAGCCTTCATAGAAACTGCACATCAAACATTTTCAGCACAAGAACTGGAGCATGGCATGTCCAGGTGGAGTCACGCAATCACCAAAGCTGCAAATTTCTTTGGATGGGATGATTGCAATTACAGGAGTGATGCTGAACTAGTGGACACAATTGTTAAGAGCGTTCTTAATTTACCAGTCTTGTCTGTTACAAAATTTCCAGTTGAATTACAATCTCTCGCGGAAGAAGTGATTCAAATTATAAAAAATAAATCAACGGGACTTTGTAGGATAGGGATATGTGGAATGGGAGGATCGGGTAAAACCACCCTTGCCAAAGCCATCTATAGTCAAATTCATGGTACATTCGTGGAAAAAAGTTTTATTGAAGATATTTCAGAAGTTAGTCAGACGAGAGGGCATGTAAATTTACAACGACAGTTTCTTTCAGATGTCCTGAAAACAAAGGTAGAGATACATAACGTTGAAATGGGAAGAAGTATGATTCTGGAAAGACTTTATCGGAAAAGGGTGCTCATTGTACTTGACGATGTGAATGAACATTGTCCATTAGACATATGGGAAAGTAGGGGATGGTTCGGTGAAGGATCTGTAATAATCATTACAACAAGAGATGAAGACCTGCTAAGGAAACATGAAGTTCGTTCAGTTTTTCGGATAGATCTAATGAATGAGAACCAGTCCCTTGAACTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAACAGAATACATTGACCTTGCAAAAAGAGTAGTTGCTAGATGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAAGTAGTTTATTTGAAAGGACGAAAGAAGAATGGAAGACTGTAGTGTCAAAATTAGACAATATTCCCCAACATGAAGTTCTACAAAAATTGAAAATAAGCTTCGACAGTTTGCATAATCAAATGGAAAAAGATTTATTCCTTGATGTATGCTGTTTCTTTGTTGGCAAAGGCAAAGCTTATGTTAGGAAGATCCTAAATGGCTGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATAGAGCGTAACCTCATAAAAGTTAAAAAGAAAAACAGACTTGGAGTGCATCCTCTGCTACGAAAAATGGGAAGAGAAGTTATTCTTGAAATTTCAAGAAAGGAACCTCGAAATAAGAATCAGCTGTGGCTTGATAAGGATATGCATCACGCACTATTAGAGAATACTCTCTTTTCATCACAGGAGAACAAAATCATTCACAGATGGCCTATTGAAAGGGATTTATTTGTACGTTATCCTCCTTTCGAGATAAGTGTTCGATTAACATTGGTCAACCTTACTAGAGATTCTGAGTTCCATCCTAAGAAACTGAAATGGATCAGCAGGCAAGGGTTTCCTACAGAATACCTACCTAGCGAACTTTATCTGCATGATGCAATAGTGATTGATTTAAAATACAATCTTCTTCGATTCTTCTGGAAGGAACCTCAGGTTTTGGTCTCGCTAAAAGTCCTTAATCTCAGTCACTCCATGTACTTGACAGAAACCCCTCACTTTTCGAGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGCCCAAGGTTGCGCCAAGTACATGAATCTATTGGATGCCTATGCAATCTTACACTTCTAAATGTGAAGGATTGTACAAGTCTAAACAATCTCCCAAAAGAGATATATAGGTTGAAATCTTTAAAAACTCTCATTCTCTCTGGCTGTTCAAAGATAAGCCTAATTGAAAAAGATATAGGGCAAATGGAATCCTTGATAACTCTAATTACTGAAAATACAGCTGTGAAACAAGTGCCCTTTTCCATTGTAAGCTCAAAATGCATTGGACGTATATCCTTATATTATTTTGATGGATTGTTATATAATCTTTTTCCTTCTATCATTCGGTGTTGGATGTCGCAAACAATGAATCCCCTATCTTATATTCATTCCTTTTGCATGGATAAGGAGCATAATAGTGGGGATGACATTATTCCACTATTTAACACCCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGATTTCCACTATCTAAGCAAGTAA | 2430 | 0.3852 | MEFASSSSKLPRKYDVLISFTGEDIRRKFVSHLDSVLSSVGLTTFLQHDNAVQPKHIQEPILNLCRVAIVVFTETYSQSACCLHQLQQIIEWHETYGRHVLPVYYEIQPSDVRLQKGDFGKAFIETAHQTFSAQELEHGMSRWSHAITKAANFFGWDDCNYRSDAELVDTIVKSVLNLPVLSVTKFPVELQSLAEEVIQIIKNKSTGLCRIGICGMGGSGKTTLAKAIYSQIHGTFVEKSFIEDISEVSQTRGHVNLQRQFLSDVLKTKVEIHNVEMGRSMILERLYRKRVLIVLDDVNEHCPLDIWESRGWFGEGSVIIITTRDEDLLRKHEVRSVFRIDLMNENQSLELLSWHAFREAKPKTEYIDLAKRVVARCGGLPLALEVIGSSLFERTKEEWKTVVSKLDNIPQHEVLQKLKISFDSLHNQMEKDLFLDVCCFFVGKGKAYVRKILNGCGVDADSGIRVLIERNLIKVKKKNRLGVHPLLRKMGREVILEISRKEPRNKNQLWLDKDMHHALLENTLFSSQENKIIHRWPIERDLFVRYPPFEISVRLTLVNLTRDSEFHPKKLKWISRQGFPTEYLPSELYLHDAIVIDLKYNLLRFFWKEPQVLVSLKVLNLSHSMYLTETPHFSRLPSLEQLILKDCPRLRQVHESIGCLCNLTLLNVKDCTSLNNLPKEIYRLKSLKTLILSGCSKISLIEKDIGQMESLITLITENTAVKQVPFSIVSSKCIGRISLYYFDGLLYNLFPSIIRCWMSQTMNPLSYIHSFCMDKEHNSGDDIIPLFNTLANLRSVLVQCDTDFHYLSK* | 810 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra9g0929 | 809 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 17 | 747 | IPR044974 | GO:0006952 | |
| Vra9g0929 | 809 | SUPERFAMILY | "Winged helix" DNA-binding domain | 413 | 519 | IPR036390 | - | |
| Vra9g0929 | 809 | PRINTS | Disease resistance protein signature | 210 | 225 | - | - | |
| Vra9g0929 | 809 | PRINTS | Disease resistance protein signature | 285 | 299 | - | - | |
| Vra9g0929 | 809 | PRINTS | Disease resistance protein signature | 377 | 391 | - | - | |
| Vra9g0929 | 809 | PRINTS | Disease resistance protein signature | 682 | 698 | - | - | |
| Vra9g0929 | 809 | Gene3D | - | 7 | 175 | IPR035897 | - | |
| Vra9g0929 | 809 | SUPERFAMILY | L domain-like | 549 | 756 | - | - | |
| Vra9g0929 | 809 | Gene3D | - | 176 | 337 | IPR027417 | - | |
| Vra9g0929 | 809 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 170 | 436 | IPR027417 | - | |
| Vra9g0929 | 809 | Pfam | TIR domain | 13 | 176 | IPR000157 | GO:0007165 | |
| Vra9g0929 | 809 | SMART | till_3 | 13 | 153 | IPR000157 | GO:0007165 | |
| Vra9g0929 | 809 | Gene3D | Ribonuclease Inhibitor | 554 | 709 | IPR032675 | - | |
| Vra9g0929 | 809 | ProSiteProfiles | TIR domain profile. | 12 | 179 | IPR000157 | GO:0007165 | |
| Vra9g0929 | 809 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 4 | 156 | IPR035897 | - | |
| Vra9g0929 | 809 | SMART | AAA_5 | 207 | 348 | IPR003593 | - | |
| Vra9g0929 | 809 | Gene3D | - | 342 | 426 | IPR042197 | - | |
| Vra9g0929 | 809 | Pfam | NB-ARC domain | 194 | 415 | IPR002182 | GO:0043531 | |
| Vra9g0929 | 809 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 17 | 747 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra9g0929 | Vra-Chr9 | 11106043 | 11111622 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vra9g0929 | 12 | 728 | WRKY Transcription Factor Family | AT4G12020 | 26.110 | 2.41e-59 | 218 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra9g0929 | - | - | vun:114165123 | 1096.26 |