Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0928 ATGGACTTCACATCCTCGAAATCGAAACACCAACGGATTCACGACGTATTCATCAACTTCAGGGGAGAAGACACCCGCAGGAAGTTCGTTTCTCATCTCCACTATGCTCTCTCAAACGCTGGAGTCAACACCTTCTTTGACGAGGAGAATCTTGTCAAAGGAATGCAGCTTCAAGAACTCATGCGAGCAGTAGAAGGATCTCAGATAGCGATCGTTGTTTTCTCCCAAACCTACACTGAATCCACTTGGTGCCTTGATGAGCTTGAACAAATCATCAAATGCAACCAAACTCAGGGCCAGAGTGTTCTCCCTGTGTTTTACGAGATTGACCCATCCGATGTACGTCATCAGAAAGGTGATTTTGGAAAATCGTTGGAAGAAGCTGCACGCAGAACCTATTCAGGAGAAGAACTGGAGCGTGCCTTGTCCCGGTGGAGCCGTGCGCTTAATAAAGCTGCAGGTATCTCTGGTTGGGATGTCAGAAATTTCAGGAATGAAGCTGAATTAGTAAGACAAATTGTTGACCGCGTTCAGAAGTTACTGGACTACGAAGTCTTGTCTATTACAGAATACCCTGTTGGACTAGAATCCCGTGCGCAAGACGTGATTGGACTCATTGAAACTCGTTCCACCCAAGTCTGTATGATCGGGATTTGGGGTATGGGGGGATCGGGGAAAACTACCGTTGCAAAAGCTGTCTACAATCAGATTCATCGTAGATTCATGGATAAAAGTTTCATTGAGAATATTAGAGAAACTTGTGAAAATCATGGTAGAGGGTATGTTCCTTTGCAAGAACAGCTTCTTTCAAATGTTCTGAAAACGAAGGTGGAGATACATAGCGTTGGGATGGGGACGACTATGATCGAGAACAGACTTGATGGAAAAACCGCACTCATTGTACTTGATGATGTGAATGAGTACAACCAATTAAAAGCTGTGTGTGGAAATCGTAAGTGGATTGGTCAAGGAAGTGTAATAATCATTACAACTAGAGATGTTGGCCTCCTTACTAGACTTGATGTTGATTATGTTTATGGGATGGATAAAATGGATGAAGACGAGTCGCTTCAGCTTTTCAGTTTTCATTGTTTTGGAGATGCAAAACCAAAAGAAGACTTCAGGGAGCTTTCAAAAAACGTTGTTGCTTATTGTGGAGGACTACCTCTGGCTCTTGAAGTGCTTGGTTCTTATTTATTTGATAAGACGTCAAAGAGAGTGTGGGAAGGAGTATTGTCGATACTAGAAAAAATTCCCAATGATGAGGTTCAGCGGAAATTAAGGATAAGCTTTGATAGTTTAAGCAATGACATGGAGAAGGATATATTNCTTGATGTATGTTGTTTCTTTATAGGTAAAGACAGAGGTTATGTCACAGAAATACTAAATGGTTGTGAACTATGTGCTGATGTTGGAATACCGGTTCTCATAGAACGTAGCCTCATAAAAGTAGAAAAAAACAACAAACTCGGAATGCATCCTTTGCTACAAGAAATGGGAAGAGAGATCATTCGTGAAAACTCAAGAAAGGACCCTGGGAAGCACAGTCGATTGTGGTCTCAAAAGGAAGTAGTTGAAGTATTGACAAAGAATAGTGGGACTGAAGCTATTGAGGGATTGGTTTTGAAAATGCATTTAACCAGCAGAGATTGCTTCAAAACCGACTCTTTCCAGAAAATGGAGAGATTGAGACTGTTGCAACTCCATCATGTACAACTTGCTGGAAATTATGGGTACCTTTCTAAGCAACTGAGATGGATCTCTTGGCACGGCTTTCCTTCAAATTGTCTGCCAAACAGCTTTTGTATGGATGATGTAATTGCGATTGATTTAAAGCACAGTCATCTTCGATTCGTCTGGAAACAATCCCAGGATTTGAAGTGGCTAAAAGTCCTTAATCTCAGTCACTCGAGGTACTTGACAGAAACCCCTGACTTTTCTAGACTACCAAGTCTTGAGCAGCTCATTCTCAAAGATTGTCCAAGTTTATTAGCGATACACAATTCCATTGGTGATCTCTGTAATATTTTATTGATAAATTTGAAGGATTGTACAAGCCTAAGCAATCTCCCCAAAGAGATATATAAGTTGAAATCTGTGAAAACATTCATCCTTTCTGGTTGNTCAAAGATTGACAAATTGGAAGAAGATATAGCACAGATGGAATCCTTGACAACTCTAATTGCTGATAATACTGCTGTGAAACAGGTCCCCGTTTCAATAGTAACCTCGAAAAGCATTGGATATATATCCTTATGCGGATTTGAAGGACTGGCACGAAATGTTTTTCCTTCTATCATCCAGTCTTGGATGTCACCAACAATGAATCCCCTGTTATTTATTCGTCCGTTTTCTGCCACATCATGTTCCCTGGTTTCCATGAATACACAGAATAATACTTTGGGTGAACTTGCACCAATGCTTAGAAGCCTTCCAAATCTTCGAAGTGTTTTGCTGCGATATGAGACAGAGTCTCAACTATCTAAACATGTTAAAACCTTTCTGGTTGAACATGTTGTAAATGTTGCAGAATTAGGAATTTCAAGGCATCACTTGAGGTCATCTTTGATTGGAGTTGGTAGTTACAAAGCATACTTTGATATTCTCAATGATAGAATATCTAAGGAATTGGTAACCGATGAGGCTTGTGATGTTTCACTTCCAATTGACAATTATCCTTATTGGTCGGCCCATACAGGTGAGGGACAGTCAGTGTTTTTCACTGTGCCGGAGGACTGTGGCATGAAGGGAATGACTTTGTGTATTGTTTATTTATCAAACCCCGAAATCAAGCCCACCGAATGTCTTACTAGTGTCTTAATTGCTAATTACACAAAGCGCACCCTGCAGATACACAAGCAAGAAACAGTGATTTCCTTTAATGATGAAGATTGGCAGGGGATAATATCACATTTGGCAGGTGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCATGACTTGGTGGTCAAGAAAACGGCTGTCTATCTGATGTATGGTGAATCAAACGATATAGAAATTGAGACGACGAATTGTGAATTGAATGATGTAGAAATTGAGCCGCCGCATTGTGAATCAAATAATGTCGAAATTAAGGCAGTATGTATACCAAATGATATTGAAAGTAAGCCGATGCATTATGAAGCAAATGATATCAAAATTGCGGCCATGAATTCTGAATCAAATGTCTTGGAAATGAAGTCTGATCCTAAGCCAAACGGAAATGGCTGCATAAGATTCTTCAAGAAACTTGCAATGTGTGACTGGAACGCAAGTGGATGA 3282 0.4034 MDFTSSKSKHQRIHDVFINFRGEDTRRKFVSHLHYALSNAGVNTFFDEENLVKGMQLQELMRAVEGSQIAIVVFSQTYTESTWCLDELEQIIKCNQTQGQSVLPVFYEIDPSDVRHQKGDFGKSLEEAARRTYSGEELERALSRWSRALNKAAGISGWDVRNFRNEAELVRQIVDRVQKLLDYEVLSITEYPVGLESRAQDVIGLIETRSTQVCMIGIWGMGGSGKTTVAKAVYNQIHRRFMDKSFIENIRETCENHGRGYVPLQEQLLSNVLKTKVEIHSVGMGTTMIENRLDGKTALIVLDDVNEYNQLKAVCGNRKWIGQGSVIIITTRDVGLLTRLDVDYVYGMDKMDEDESLQLFSFHCFGDAKPKEDFRELSKNVVAYCGGLPLALEVLGSYLFDKTSKRVWEGVLSILEKIPNDEVQRKLRISFDSLSNDMEKDIXLDVCCFFIGKDRGYVTEILNGCELCADVGIPVLIERSLIKVEKNNKLGMHPLLQEMGREIIRENSRKDPGKHSRLWSQKEVVEVLTKNSGTEAIEGLVLKMHLTSRDCFKTDSFQKMERLRLLQLHHVQLAGNYGYLSKQLRWISWHGFPSNCLPNSFCMDDVIAIDLKHSHLRFVWKQSQDLKWLKVLNLSHSRYLTETPDFSRLPSLEQLILKDCPSLLAIHNSIGDLCNILLINLKDCTSLSNLPKEIYKLKSVKTFILSGXSKIDKLEEDIAQMESLTTLIADNTAVKQVPVSIVTSKSIGYISLCGFEGLARNVFPSIIQSWMSPTMNPLLFIRPFSATSCSLVSMNTQNNTLGELAPMLRSLPNLRSVLLRYETESQLSKHVKTFLVEHVVNVAELGISRHHLRSSLIGVGSYKAYFDILNDRISKELVTDEACDVSLPIDNYPYWSAHTGEGQSVFFTVPEDCGMKGMTLCIVYLSNPEIKPTECLTSVLIANYTKRTLQIHKQETVISFNDEDWQGIISHLAGGDKVEIFVTFGHDLVVKKTAVYLMYGESNDIEIETTNCELNDVEIEPPHCESNNVEIKAVCIPNDIESKPMHYEANDIKIAAMNSESNVLEMKSDPKPNGNGCIRFFKKLAMCDWNASG* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0928 1093 Gene3D - 6 179 IPR035897 -
Vra9g0928 1093 Gene3D - 350 435 IPR042197 -
Vra9g0928 1093 Pfam NB-ARC domain 205 423 IPR002182 GO:0043531
Vra9g0928 1093 Pfam TIR domain 14 178 IPR000157 GO:0007165
Vra9g0928 1093 SUPERFAMILY L domain-like 492 821 - -
Vra9g0928 1093 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 158 IPR035897 -
Vra9g0928 1093 Gene3D Ribonuclease Inhibitor 540 861 IPR032675 -
Vra9g0928 1093 SMART till_3 13 155 IPR000157 GO:0007165
Vra9g0928 1093 PRINTS Disease resistance protein signature 215 230 - -
Vra9g0928 1093 PRINTS Disease resistance protein signature 292 306 - -
Vra9g0928 1093 PRINTS Disease resistance protein signature 385 399 - -
Vra9g0928 1093 PRINTS Disease resistance protein signature 624 640 - -
Vra9g0928 1093 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1000 IPR044974 GO:0006952
Vra9g0928 1093 Gene3D - 180 344 IPR027417 -
Vra9g0928 1093 ProSiteProfiles TIR domain profile. 12 181 IPR000157 GO:0007165
Vra9g0928 1093 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 1000 - -
Vra9g0928 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0928 Vra-Chr9 11094026 11101159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0928 3 741 WRKY Transcription Factor Family AT4G12020 28.609 9.08e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0928 - - vun:114167037 1706.42