Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0927 ATGGCATTTGAGTCTTCTTCACCATCATCCGAATCCGAATGGATACACGACGTGTTCATCAATTTCAGGGGAGTAGACACCCGCAGGACGTTCGTTTCTCATCTCCATTCTTCGCTCTCAAAAGCTGGAGTCAAAACCTTCCTTGACGAGGAGCATCTGCTCAAGGGAATGAAGCTGCAAGAACTATTCCGAGCAATACAAGTGTCTCAGATAGCAATAGTAGTTTTCTCGAAAGGCTACCCTGACTCTAGCTGGTGTCTTGATGAGCTTCAAAAAATATTTCAATGCAGCCAAACATGTGGACTAAGAGTTTTTCCCGTATTTTACTACGTTGAACCATCCGAGATTCGTAACCAGACGGGTGATTTTGGAGATGCGTTGAGAGCAGCCGCAGAACGTGACTATGCAGGAGAACATCTGGAATTTACGTTGTCGAGTTGGAGAGATATACTCACCGACGCTGCAAATTTGTGTGGGTGGGATGCGAAGGATAGGAGAAGGACTGAAGCTGAGCTAGTGCGTGACATTGTTGACTACGTTATTGACCAACTTGATTACAATGTCTTGTCTATCACCCAATTTCCTGTTGGATTAGATCATCCGGTGCAAGTAGTGATTAGGTTTATTAAAAGAATAAAAAAATCTTGTAAGATAGGGATATGGGGAATGGGAGGATCTGGTAAAACTACCATGGCCAAAGCCATCTACAATAAACTTCATCGTTCCTTCGAGAATAAAAGTTTCATTGAAAATATTAGAGAAGTTTGTCAAACAGATAGAAGAAGGCTTGTTCGTTTGCAGGAAAAACTTCTTTCTGATATCCTGAAAGTAAAGATGGAGATACGAAGCGTTGGGATCGGACAAGTTATGATTGACAACAGATTTAATGGAAAAAGGGCGTTCATAGTTCTTGATGATGTTAATAAGTTTGACCAACTAGAAGCACTATCCGGAAATACTGAGTGGATGGGTGAAAGAAGCGTAATAATCATTACGACTAGAGATCTACATCTACTCAAGAGATTTGAAGTTGATTATGTTTATGAAATGAAGGAAATGCAAGCAAATGAGTCCCTTACGCTTTTTAGTAGGCATGCGTTCAGAGAAGAAAAACCAAGAGAAGATTTCAATGAACTTGCAAAAGAAGCAGTTAATTATTGTGGTGGACTACCTCTAGCTCTTGAAGTTCTGGGTTCTTATTTGAGTAATAGGACAATGACTGAGTGGAGAAGTGTGTTGTCAAAACTACAAATAAGTCCCAATCCCGAAGTCCAAGAGAAACTAAGGATAAGTTACGATTTATGTGATGAAATGGAACAGGAAATATTTCTTGATGTATGTTGCGTTTTTAATGGTAAGGACAGAAGCTGTGTGACGGAGGTACTAAATGGCTGTGAACTATGTGCTGATATTGGAATAACTGTCCTCTTAGAGCGTAGCCTAATAAAAATCGTAAAAAACAATAAACTCAAAATGCATCAATTGCTACAAGAAATGGGAAGAGATATTATTCGTGGAGGCTCAAGAAGAGAACCTGGAAAGTACAGTAGATTATGGTTTCAAAAGGATGTACGTGATGTATTGACAAATAGTACCGGGACAGATGCCGTTGAGGGATTGGCTCTGAAATTTGATTTAAACGACAAAGAACACTTTAAAGCTGATGCTTTTAAGGAAATGAGGAGTTTGAGACTGTTGCAACTTCATTATGTAGAACTCATGGGAGATTATTGCCATCTTTCTAAGCAATTGAGATGGATCTACTGGGAAGGGTTTCTTTCAGAGCACATACCTGACAACTTTTATCTGGAAAATGCAATTGCAATTAATTTCAAACACAGTCATCTTAGGCAAGTGTGGAAAGAACCCAAGGATTTGTCGATGTTAAAGTTCCTCAATCTTAGTTATTCCAATTACTTGACTGAAACTCCTGATTTTTCTAAACTTAAAAATCTTGAAAAGCTCATTCTCAAATATTGTCGAAGTTTGCGCTGTGTACACAAATCCATTGGAGATCTCCGTAATATTGTGTTCATAAATTTGAAGGATTGTACAAGCCTTACTAGTCTTCCAAGAGAGATATATAAGTTGAAATCTTTGAAAACTCTCATCCTATCTGGTTGTACAAAGATTGACAAATTGGAAGAAGATATCTCGGAGATGAAATCCTTGACAACTCTAATTGCTGAAAATGCTGTTGTGAAAGTTCCCTTTTCAATAGTAAGCTCCAAAAGCATTGGATATCTTTTTCCATGTGGGTTTGAAGGATTCTCCCATGATGTTTTACCATCTATTATTTGGTGCTGGTCGTCACCGACAATGAATCCCCTGTCTCGTATTCTTCCGTTATGTGGCATATCAGCATCTCTAGTTTCCATGAATATGCAAAACATTGATTTGGGTGACCTAGCACCGATCCTTACCAACCTTTTAAATCTTCGAAGTGTTTGCATGCAATGTGACACGGAGTTTCAAATAACTAAACAAGTAAGAAAATTTTTGAATGAACTAGCATCCTGTACATCAGAAATTTCGGACAATTCCTTGAGATCTTATTTGATTGGAATTGGAAGCTACCAAGAAGAAGACTTCAATACTCTTAACAAGAGCATATCTAAGGAATTGGCAACCAGTGGATCTTGTCATGTTTTTCTGCCAGGAGGCAATTATCCTTTTTGGTTGGCTCATACGGGGGAGGGCCATTCAGTGTCTTTCACTGTGCCTCAGGATTGGGACATGAAGGGAATGGCTCTGTGTGTTTTGTATTTAGCAACACCTGAAACAGCAGCAACTGAGTGTCTTATCAGTGTAGTAATGGTTAATTACACAAAGTACACCATCCAGTTATACAAGCGAGACACAGTGATTTCCTTTAATGATGCAGATTGGCAGGGCATAATATCTCATTTGGAAGCTGGAGACGAGGTGGAGATTTTTCTGTCTTTTAGGAATGAATTGGTGATAAAAAACACAGCCGTCTATCTCATAAATTATGAATTCATTGACATGGAAGTGAAAGCTGTTAGTAAGCCACCTGTTATGAAGGTTTATAGCAGGAAGAGGAATCTTACGGATCAAGAAAGCAGTCGGAAGAGACAATGGTAA 3105 0.3894 MAFESSSPSSESEWIHDVFINFRGVDTRRTFVSHLHSSLSKAGVKTFLDEEHLLKGMKLQELFRAIQVSQIAIVVFSKGYPDSSWCLDELQKIFQCSQTCGLRVFPVFYYVEPSEIRNQTGDFGDALRAAAERDYAGEHLEFTLSSWRDILTDAANLCGWDAKDRRRTEAELVRDIVDYVIDQLDYNVLSITQFPVGLDHPVQVVIRFIKRIKKSCKIGIWGMGGSGKTTMAKAIYNKLHRSFENKSFIENIREVCQTDRRRLVRLQEKLLSDILKVKMEIRSVGIGQVMIDNRFNGKRAFIVLDDVNKFDQLEALSGNTEWMGERSVIIITTRDLHLLKRFEVDYVYEMKEMQANESLTLFSRHAFREEKPREDFNELAKEAVNYCGGLPLALEVLGSYLSNRTMTEWRSVLSKLQISPNPEVQEKLRISYDLCDEMEQEIFLDVCCVFNGKDRSCVTEVLNGCELCADIGITVLLERSLIKIVKNNKLKMHQLLQEMGRDIIRGGSRREPGKYSRLWFQKDVRDVLTNSTGTDAVEGLALKFDLNDKEHFKADAFKEMRSLRLLQLHYVELMGDYCHLSKQLRWIYWEGFLSEHIPDNFYLENAIAINFKHSHLRQVWKEPKDLSMLKFLNLSYSNYLTETPDFSKLKNLEKLILKYCRSLRCVHKSIGDLRNIVFINLKDCTSLTSLPREIYKLKSLKTLILSGCTKIDKLEEDISEMKSLTTLIAENAVVKVPFSIVSSKSIGYLFPCGFEGFSHDVLPSIIWCWSSPTMNPLSRILPLCGISASLVSMNMQNIDLGDLAPILTNLLNLRSVCMQCDTEFQITKQVRKFLNELASCTSEISDNSLRSYLIGIGSYQEEDFNTLNKSISKELATSGSCHVFLPGGNYPFWLAHTGEGHSVSFTVPQDWDMKGMALCVLYLATPETAATECLISVVMVNYTKYTIQLYKRDTVISFNDADWQGIISHLEAGDEVEIFLSFRNELVIKNTAVYLINYEFIDMEVKAVSKPPVMKVYSRKRNLTDQESSRKRQW* 1035
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0927 1034 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 160 IPR035897 -
Vra9g0927 1034 Gene3D - 9 191 IPR035897 -
Vra9g0927 1034 Gene3D - 353 436 IPR042197 -
Vra9g0927 1034 Pfam NB-ARC domain 215 422 IPR002182 GO:0043531
Vra9g0927 1034 CDD AAA 196 346 - -
Vra9g0927 1034 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 996 IPR044974 GO:0006952
Vra9g0927 1034 ProSiteProfiles TIR domain profile. 14 184 IPR000157 GO:0007165
Vra9g0927 1034 SUPERFAMILY L domain-like 493 816 - -
Vra9g0927 1034 PRINTS Disease resistance protein signature 217 232 - -
Vra9g0927 1034 PRINTS Disease resistance protein signature 294 308 - -
Vra9g0927 1034 PRINTS Disease resistance protein signature 387 401 - -
Vra9g0927 1034 PRINTS Disease resistance protein signature 695 711 - -
Vra9g0927 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 445 IPR027417 -
Vra9g0927 1034 Gene3D - 192 347 IPR027417 -
Vra9g0927 1034 SMART till_3 15 157 IPR000157 GO:0007165
Vra9g0927 1034 Gene3D Ribonuclease Inhibitor 540 736 IPR032675 -
Vra9g0927 1034 Coils Coil 249 269 - -
Vra9g0927 1034 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 996 - -
Vra9g0927 1034 Pfam TIR domain 16 180 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra9g0927 Vra-Chr9 11084700 11089326 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0927 8 740 WRKY Transcription Factor Family AT4G12020 29.249 4.01e-76 273
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0927 - - gmx:100815297 1229.16