Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g0927 | ATGGCATTTGAGTCTTCTTCACCATCATCCGAATCCGAATGGATACACGACGTGTTCATCAATTTCAGGGGAGTAGACACCCGCAGGACGTTCGTTTCTCATCTCCATTCTTCGCTCTCAAAAGCTGGAGTCAAAACCTTCCTTGACGAGGAGCATCTGCTCAAGGGAATGAAGCTGCAAGAACTATTCCGAGCAATACAAGTGTCTCAGATAGCAATAGTAGTTTTCTCGAAAGGCTACCCTGACTCTAGCTGGTGTCTTGATGAGCTTCAAAAAATATTTCAATGCAGCCAAACATGTGGACTAAGAGTTTTTCCCGTATTTTACTACGTTGAACCATCCGAGATTCGTAACCAGACGGGTGATTTTGGAGATGCGTTGAGAGCAGCCGCAGAACGTGACTATGCAGGAGAACATCTGGAATTTACGTTGTCGAGTTGGAGAGATATACTCACCGACGCTGCAAATTTGTGTGGGTGGGATGCGAAGGATAGGAGAAGGACTGAAGCTGAGCTAGTGCGTGACATTGTTGACTACGTTATTGACCAACTTGATTACAATGTCTTGTCTATCACCCAATTTCCTGTTGGATTAGATCATCCGGTGCAAGTAGTGATTAGGTTTATTAAAAGAATAAAAAAATCTTGTAAGATAGGGATATGGGGAATGGGAGGATCTGGTAAAACTACCATGGCCAAAGCCATCTACAATAAACTTCATCGTTCCTTCGAGAATAAAAGTTTCATTGAAAATATTAGAGAAGTTTGTCAAACAGATAGAAGAAGGCTTGTTCGTTTGCAGGAAAAACTTCTTTCTGATATCCTGAAAGTAAAGATGGAGATACGAAGCGTTGGGATCGGACAAGTTATGATTGACAACAGATTTAATGGAAAAAGGGCGTTCATAGTTCTTGATGATGTTAATAAGTTTGACCAACTAGAAGCACTATCCGGAAATACTGAGTGGATGGGTGAAAGAAGCGTAATAATCATTACGACTAGAGATCTACATCTACTCAAGAGATTTGAAGTTGATTATGTTTATGAAATGAAGGAAATGCAAGCAAATGAGTCCCTTACGCTTTTTAGTAGGCATGCGTTCAGAGAAGAAAAACCAAGAGAAGATTTCAATGAACTTGCAAAAGAAGCAGTTAATTATTGTGGTGGACTACCTCTAGCTCTTGAAGTTCTGGGTTCTTATTTGAGTAATAGGACAATGACTGAGTGGAGAAGTGTGTTGTCAAAACTACAAATAAGTCCCAATCCCGAAGTCCAAGAGAAACTAAGGATAAGTTACGATTTATGTGATGAAATGGAACAGGAAATATTTCTTGATGTATGTTGCGTTTTTAATGGTAAGGACAGAAGCTGTGTGACGGAGGTACTAAATGGCTGTGAACTATGTGCTGATATTGGAATAACTGTCCTCTTAGAGCGTAGCCTAATAAAAATCGTAAAAAACAATAAACTCAAAATGCATCAATTGCTACAAGAAATGGGAAGAGATATTATTCGTGGAGGCTCAAGAAGAGAACCTGGAAAGTACAGTAGATTATGGTTTCAAAAGGATGTACGTGATGTATTGACAAATAGTACCGGGACAGATGCCGTTGAGGGATTGGCTCTGAAATTTGATTTAAACGACAAAGAACACTTTAAAGCTGATGCTTTTAAGGAAATGAGGAGTTTGAGACTGTTGCAACTTCATTATGTAGAACTCATGGGAGATTATTGCCATCTTTCTAAGCAATTGAGATGGATCTACTGGGAAGGGTTTCTTTCAGAGCACATACCTGACAACTTTTATCTGGAAAATGCAATTGCAATTAATTTCAAACACAGTCATCTTAGGCAAGTGTGGAAAGAACCCAAGGATTTGTCGATGTTAAAGTTCCTCAATCTTAGTTATTCCAATTACTTGACTGAAACTCCTGATTTTTCTAAACTTAAAAATCTTGAAAAGCTCATTCTCAAATATTGTCGAAGTTTGCGCTGTGTACACAAATCCATTGGAGATCTCCGTAATATTGTGTTCATAAATTTGAAGGATTGTACAAGCCTTACTAGTCTTCCAAGAGAGATATATAAGTTGAAATCTTTGAAAACTCTCATCCTATCTGGTTGTACAAAGATTGACAAATTGGAAGAAGATATCTCGGAGATGAAATCCTTGACAACTCTAATTGCTGAAAATGCTGTTGTGAAAGTTCCCTTTTCAATAGTAAGCTCCAAAAGCATTGGATATCTTTTTCCATGTGGGTTTGAAGGATTCTCCCATGATGTTTTACCATCTATTATTTGGTGCTGGTCGTCACCGACAATGAATCCCCTGTCTCGTATTCTTCCGTTATGTGGCATATCAGCATCTCTAGTTTCCATGAATATGCAAAACATTGATTTGGGTGACCTAGCACCGATCCTTACCAACCTTTTAAATCTTCGAAGTGTTTGCATGCAATGTGACACGGAGTTTCAAATAACTAAACAAGTAAGAAAATTTTTGAATGAACTAGCATCCTGTACATCAGAAATTTCGGACAATTCCTTGAGATCTTATTTGATTGGAATTGGAAGCTACCAAGAAGAAGACTTCAATACTCTTAACAAGAGCATATCTAAGGAATTGGCAACCAGTGGATCTTGTCATGTTTTTCTGCCAGGAGGCAATTATCCTTTTTGGTTGGCTCATACGGGGGAGGGCCATTCAGTGTCTTTCACTGTGCCTCAGGATTGGGACATGAAGGGAATGGCTCTGTGTGTTTTGTATTTAGCAACACCTGAAACAGCAGCAACTGAGTGTCTTATCAGTGTAGTAATGGTTAATTACACAAAGTACACCATCCAGTTATACAAGCGAGACACAGTGATTTCCTTTAATGATGCAGATTGGCAGGGCATAATATCTCATTTGGAAGCTGGAGACGAGGTGGAGATTTTTCTGTCTTTTAGGAATGAATTGGTGATAAAAAACACAGCCGTCTATCTCATAAATTATGAATTCATTGACATGGAAGTGAAAGCTGTTAGTAAGCCACCTGTTATGAAGGTTTATAGCAGGAAGAGGAATCTTACGGATCAAGAAAGCAGTCGGAAGAGACAATGGTAA | 3105 | 0.3894 | MAFESSSPSSESEWIHDVFINFRGVDTRRTFVSHLHSSLSKAGVKTFLDEEHLLKGMKLQELFRAIQVSQIAIVVFSKGYPDSSWCLDELQKIFQCSQTCGLRVFPVFYYVEPSEIRNQTGDFGDALRAAAERDYAGEHLEFTLSSWRDILTDAANLCGWDAKDRRRTEAELVRDIVDYVIDQLDYNVLSITQFPVGLDHPVQVVIRFIKRIKKSCKIGIWGMGGSGKTTMAKAIYNKLHRSFENKSFIENIREVCQTDRRRLVRLQEKLLSDILKVKMEIRSVGIGQVMIDNRFNGKRAFIVLDDVNKFDQLEALSGNTEWMGERSVIIITTRDLHLLKRFEVDYVYEMKEMQANESLTLFSRHAFREEKPREDFNELAKEAVNYCGGLPLALEVLGSYLSNRTMTEWRSVLSKLQISPNPEVQEKLRISYDLCDEMEQEIFLDVCCVFNGKDRSCVTEVLNGCELCADIGITVLLERSLIKIVKNNKLKMHQLLQEMGRDIIRGGSRREPGKYSRLWFQKDVRDVLTNSTGTDAVEGLALKFDLNDKEHFKADAFKEMRSLRLLQLHYVELMGDYCHLSKQLRWIYWEGFLSEHIPDNFYLENAIAINFKHSHLRQVWKEPKDLSMLKFLNLSYSNYLTETPDFSKLKNLEKLILKYCRSLRCVHKSIGDLRNIVFINLKDCTSLTSLPREIYKLKSLKTLILSGCTKIDKLEEDISEMKSLTTLIAENAVVKVPFSIVSSKSIGYLFPCGFEGFSHDVLPSIIWCWSSPTMNPLSRILPLCGISASLVSMNMQNIDLGDLAPILTNLLNLRSVCMQCDTEFQITKQVRKFLNELASCTSEISDNSLRSYLIGIGSYQEEDFNTLNKSISKELATSGSCHVFLPGGNYPFWLAHTGEGHSVSFTVPQDWDMKGMALCVLYLATPETAATECLISVVMVNYTKYTIQLYKRDTVISFNDADWQGIISHLEAGDEVEIFLSFRNELVIKNTAVYLINYEFIDMEVKAVSKPPVMKVYSRKRNLTDQESSRKRQW* | 1035 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g0927 | 1034 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 6 | 160 | IPR035897 | - | |
Vra9g0927 | 1034 | Gene3D | - | 9 | 191 | IPR035897 | - | |
Vra9g0927 | 1034 | Gene3D | - | 353 | 436 | IPR042197 | - | |
Vra9g0927 | 1034 | Pfam | NB-ARC domain | 215 | 422 | IPR002182 | GO:0043531 | |
Vra9g0927 | 1034 | CDD | AAA | 196 | 346 | - | - | |
Vra9g0927 | 1034 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 19 | 996 | IPR044974 | GO:0006952 | |
Vra9g0927 | 1034 | ProSiteProfiles | TIR domain profile. | 14 | 184 | IPR000157 | GO:0007165 | |
Vra9g0927 | 1034 | SUPERFAMILY | L domain-like | 493 | 816 | - | - | |
Vra9g0927 | 1034 | PRINTS | Disease resistance protein signature | 217 | 232 | - | - | |
Vra9g0927 | 1034 | PRINTS | Disease resistance protein signature | 294 | 308 | - | - | |
Vra9g0927 | 1034 | PRINTS | Disease resistance protein signature | 387 | 401 | - | - | |
Vra9g0927 | 1034 | PRINTS | Disease resistance protein signature | 695 | 711 | - | - | |
Vra9g0927 | 1034 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 188 | 445 | IPR027417 | - | |
Vra9g0927 | 1034 | Gene3D | - | 192 | 347 | IPR027417 | - | |
Vra9g0927 | 1034 | SMART | till_3 | 15 | 157 | IPR000157 | GO:0007165 | |
Vra9g0927 | 1034 | Gene3D | Ribonuclease Inhibitor | 540 | 736 | IPR032675 | - | |
Vra9g0927 | 1034 | Coils | Coil | 249 | 269 | - | - | |
Vra9g0927 | 1034 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 19 | 996 | - | - | |
Vra9g0927 | 1034 | Pfam | TIR domain | 16 | 180 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g0927 | Vra-Chr9 | 11084700 | 11089326 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g0927 | 8 | 740 | WRKY Transcription Factor Family | AT4G12020 | 29.249 | 4.01e-76 | 273 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g0927 | - | - | gmx:100815297 | 1229.16 |