Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0926 ATGGACGTGTCTTCTTCTCTTTTGTTTTTCACAAAATTCAGAGTGTTAGCCGACGTTTTCATCCATTGTTTCGGGGACGACGTCCGTAGAAATTTTGTCTCACATCTGAGTTCTGCCCTTTTACAGGCTGGAGTAAAACCTTACCTCCTAGTTGACATGGAAATGTTGTCGGAAAAATTTATGTCATCAATTACAAGGTTTCAGATTGGAATAGTTGTTCTCACCAAGGCATACATCGAATCATCTCAGTGTGTTGAAGACCTTGTGAGAATCATTGAATGTCTCGAAACTCACTGTCTAATAGTTATGCCCGTGTTTTACGATATTGACCCATCTGATGTACTTGATATCACAAATTATTCATCCCATGTACGTGATCAGAAGGAGCGTGAATTCCAAAGGCCAATTGATCTTTCGAAAGATAATTCAAGAGATGGGAGGACAAAGTGGACTCCGATTAAGGCAGAAAGATTCAACTCTCCAGTCATAGTACACACTTATGCGGCGAGCTACGCACTCAACAGAGTTGCAAATTTGTCTACTTGGGATGAGAGTAAACACAGGAATGATGCTGAACTAGTGGAGGAAATTGTTAAGTCTGTTCTCGCTAAACTAGACCGCGTCTTGCCTGTAACTAAATTTCCTATTGAATTAGAAACCCATGTCAAAAATGTGATTGGATTGTTTGAAAATCAACCCAACAAAGTTTGTATGATCGGGATATGGGGAATAGGAGGATCGGGTAAAACAACCTTAGCGAAAGCCATCTACAACAAAATTCCTTTTACATTTGGTGATAAAAGTTTCATTCAAGATATTAGAGAAGTTTGTCAAACAGATGGCAGAAGAGGCCTTGTTCATTTACAAGAACAACTTCTCTCAGATGTCCTTAAAAATGTGAAAACAGAGAGTGGTGACATGGAAAAAACTACTATCGAGAACAGTCTTTCTAGAAGAAAGTTGTTTATTGTGCTTGATGATGTGCATGAGATAGACCAATTAAAACACCTATGTGGAAACAGTAAATGGTTTGGTGCGGGAAGTGTAATAATCATTACCAGTAGACATTTAGACCTGCTTTATCATCATAAAGTTGATTATGTTTATGAGATGAATGAACTGGACGAAAATGACTCGGTTGAGCTTTTTAGTTGGCATGCTTTTAGAGAAGCAAAACCAAGAGAAAACTTCAATAAACTTGCAAGAACAGCCGTTGCTTATTGTGATGGACTACCACTCGCTCTTGAAGTCCTTGGTTCTTATTTGAGTAAGAGGTCAGAGAATGAATGGAGAAGTGTATTGTCAAAANTAGAAATAATTCCCAATACTCAAGTTCAGAACATCCTAAGAATAAGCTTTGACGGCTTATGTAGTGAAATGGAAAAGGATATATTTCTTGATGTATGNTGTTTCTTTATTGGTAAAGAGAGAGANTATGTCACGGAGATACTAAATGGCTGTGGACTACNTGCTGATNTTGGAATNANAGTTCTTATAGAACGTGGTCTTNTAAAAATTGAAAAGAACAANAAACTTGGAATGCATCATTTGCTTCGGGACATGGGACGAGAGATTGTGCGTCAAACTTCANCAATGCAACCTGGGAAGCGCANTAGATTGTGGCTTCCCAAGGATGTACTTGATGTATTGACAAAGAATACTGGGACAGAAGCTATTGTGGGGTTGTCTCTGAACAGTGAGTTAACGAACAGTGATTCCTTCAAAGCTGATGCTGATGCTGATGCTTTTAAGAAAATGAAGATGTTGAGATTCTTGCAACTTGATCATGTACANCTGACTGGAGATTATGGGTGTCTTTCTAAGCAACTGAGATGTATCTCCTGGAAAGGATTTTCTTTAGAGTACATACCTAACAACTTTTACTTGGAAGGTGCAATTGTGATTGATTTCCAACACAGTAATCTCATACTAGTGTGGAAAGAACCCACGGTTTTGCCGTTGCTAAAAATCCTCAATCTTAGTCATTCAAAGTACTTGACAGAAACCCCTGACTTTTCAAAATTACCAAGTCTTGAAAAGCTCATTCTCAAGCATTGTGTAAATTTGGACAAGGTACACCAATCGATTGGAGATTCACACAATCTTCTACTAATAAATTTGAAAGGCTGTACAAACCTAAGCAATCTCCCAAGTGAGACATATAAGTTGAAATCTTTGAAAACTCTTATCCTATCTGGCTGTCTGAAGATTGACATCTTTAAAGAAGATATATTACACATGAAATCTTTGAAAACTCTATTTTCTGAAAATACTGCTGTGAAACAAGTTCCCATTTCAGTTGTAAGCTCAAAAGGCATGGGATATATACATGTAGACGAAGAAAAGGGATTATCAGTTACTGTTCTTCATACTGTCATTTTGTCTTGGATTTCTCGTAATTTTAATCCCCTGTATCGTATTCGTCCGTTTCGTGGCATTTCATCAACTCTAGTTTCCATGAATGTGGAACATAATGATTTAGTAGATCTAGCACCAATCCTTAGAAGCTTTTTAAAACTGAGTACTGTTTTAGTGCAATGTGTCACGGAGTATTCAATACTTCAACAAGTAACAGTATTTTTGGAAGAAGTTCAACAAGTTGGTCCTGTAACTTGGACTAGATCTACACAACTTTCCAACCATCCATTCAGTCCATATTTGATTCAATTTGGAGGTTATCAAGAAGAAGTCTTTAATACTCTCCGCAGACGCCTTTATGATGAGGGATTGGCAGTCAGACAAACTCGTAAAGTTTTTCAGTCTAGTCACAATTATCCTCATTGGTTTGCTTATAAGAGTGAGGGACACTCAGTCAATTTCACCGTGCCTGACAATTTTCACATGGATGGAATGATTTTGTGTGTTGAGCATTTATCACGCTTGGGAGACCCAACTCAATATCTTATTTGTGTCTTAATGGTTAATTACACAAAGTGCATAATCCAGTTCTTCAATCGACAAACAATAACTTCCTGGAAAGATGTTGATTGGCAGGGCGCGATATCACCACATCTGAGATCTGGAGACAACTTGAAGATTTTTATTATTTTTGAGAAAGGATTTGAAATCCAGAAGACAGCTGTCTATCTTGTGTGTAATGGATCAACTGACAGAAAGTCGATGTAA 3126 0.3749 MDVSSSLLFFTKFRVLADVFIHCFGDDVRRNFVSHLSSALLQAGVKPYLLVDMEMLSEKFMSSITRFQIGIVVLTKAYIESSQCVEDLVRIIECLETHCLIVMPVFYDIDPSDVLDITNYSSHVRDQKEREFQRPIDLSKDNSRDGRTKWTPIKAERFNSPVIVHTYAASYALNRVANLSTWDESKHRNDAELVEEIVKSVLAKLDRVLPVTKFPIELETHVKNVIGLFENQPNKVCMIGIWGIGGSGKTTLAKAIYNKIPFTFGDKSFIQDIREVCQTDGRRGLVHLQEQLLSDVLKNVKTESGDMEKTTIENSLSRRKLFIVLDDVHEIDQLKHLCGNSKWFGAGSVIIITSRHLDLLYHHKVDYVYEMNELDENDSVELFSWHAFREAKPRENFNKLARTAVAYCDGLPLALEVLGSYLSKRSENEWRSVLSKXEIIPNTQVQNILRISFDGLCSEMEKDIFLDVXCFFIGKERXYVTEILNGCGLXADXGXXVLIERGLXKIEKNXKLGMHHLLRDMGREIVRQTSXMQPGKRXRLWLPKDVLDVLTKNTGTEAIVGLSLNSELTNSDSFKADADADAFKKMKMLRFLQLDHVXLTGDYGCLSKQLRCISWKGFSLEYIPNNFYLEGAIVIDFQHSNLILVWKEPTVLPLLKILNLSHSKYLTETPDFSKLPSLEKLILKHCVNLDKVHQSIGDSHNLLLINLKGCTNLSNLPSETYKLKSLKTLILSGCLKIDIFKEDILHMKSLKTLFSENTAVKQVPISVVSSKGMGYIHVDEEKGLSVTVLHTVILSWISRNFNPLYRIRPFRGISSTLVSMNVEHNDLVDLAPILRSFLKLSTVLVQCVTEYSILQQVTVFLEEVQQVGPVTWTRSTQLSNHPFSPYLIQFGGYQEEVFNTLRRRLYDEGLAVRQTRKVFQSSHNYPHWFAYKSEGHSVNFTVPDNFHMDGMILCVEHLSRLGDPTQYLICVLMVNYTKCIIQFFNRQTITSWKDVDWQGAISPHLRSGDNLKIFIIFEKGFEIQKTAVYLVCNGSTDRKSM* 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0926 1041 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 125 IPR035897 -
Vra9g0926 1041 Pfam NB-ARC domain 219 437 IPR002182 GO:0043531
Vra9g0926 1041 Gene3D Ribonuclease Inhibitor 562 863 IPR032675 -
Vra9g0926 1041 SUPERFAMILY L domain-like 570 842 - -
Vra9g0926 1041 SUPERFAMILY "Winged helix" DNA-binding domain 444 550 IPR036390 -
Vra9g0926 1041 Gene3D - 16 201 IPR035897 -
Vra9g0926 1041 Gene3D - 202 368 IPR027417 -
Vra9g0926 1041 ProSiteProfiles TIR domain profile. 15 205 IPR000157 GO:0007165
Vra9g0926 1041 PRINTS Disease resistance protein signature 238 253 - -
Vra9g0926 1041 PRINTS Disease resistance protein signature 315 329 - -
Vra9g0926 1041 PRINTS Disease resistance protein signature 408 422 - -
Vra9g0926 1041 PRINTS Disease resistance protein signature 721 737 - -
Vra9g0926 1041 Gene3D - 373 457 IPR042197 -
Vra9g0926 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 467 IPR027417 -
Vra9g0926 1041 Pfam TIR domain 18 116 IPR000157 GO:0007165
Vra9g0926 1041 SMART till_3 16 160 IPR000157 GO:0007165
Vra9g0926 1041 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1029 IPR044974 GO:0006952
Vra9g0926 1041 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 1029 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0926 Vra-Chr9 11060658 11066484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0926 18 767 WRKY Transcription Factor Family AT4G12020 28.886 2.30e-69 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0926 - - vun:114167037 1343.56