Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0918 ATGGACGTGTCTTCTTCTCTTTCGATTTTCTCAAAATTCATAGTCGCAGGCGAGGTTTTCATCCATTTTTTGGGGGATGACATCCATAGAAATTTCGTTTCACATCTGAGTTCTTCCCTTTTACAGGCTGGAGTAAAACCTTCCCTAATTGCTGTGGAAATGCTGTCGGAAAAGTTTATGCCATCAATTACAAGGTTTCAGATTGGAATAGTTGTTTTCACCAAAGCATACATTGAATCTTCTCGGTGTGTTGAAGACCTTCTGAGAATCATTGAATGTCACGAAAATCACGGCCTAATAGTTATGCCCGTGTTTTACGATATTGACCCATCCGATCTACTTGATCTCAAAATGGATTCATCATCCTATGTACTTTATCCGATGAAGGGTGAACTCAAAAAGAATTCATCGCCAGAACAGAGAAGTGCGAAGAGAAAAGTAAAAACGACCGTAAAGTGGACTCAGATGAAGGGCGAAAGATTAAACTATCCAATCATACTATACACTTCTGCGGGGAGTCGCGCTCTCAACAGGGTTGCAAATTTGCCTACTTGGGATGAGAGCAAACACAGGAATGATGCTGAACTAGTGGAGGAAATTGTTAAGTCTGTTCTCTCTAAATTAGAATGCGCCTTGCCTGTAACTAAATTTCCTGTTGAATTAGAAACCCAGGCGAAAAATGTGATTGGATTGTTTGAAAATCAACCCAAGGATTTTTGTACGATAGGGATATGGGGAATGGGAGGATCGGGTAAAACTACTTTAGCGAAAGCCATCTACAATAAAATTCCTTTTACATTTGGTGATAAAAGTTTCATTCAAGATATTAGAAAAGTTTGTCAAACAGATGGCAGAAGAGGCCTTGTTCAATTACAAGAGCAACTTCTTTCAGATGTCCTTAAATATGTGAAAATAGAGAAGGGTGAGATGGAAAAAACTACGATCGAGAACAGTCTTTCAGGAAGAAAGTTGTTCATTGTGCTTGACGATGTGAATGAGATAGACCAATTAAAAAACCTATGTGGAAACGGTAAATGGTTTCGTGCGGGAAGTGTAATAATCATTACGACTAGACAATTAGACCTGCTTTATCAACAAAAAGTTGATTATGTTTATGAGATGGATGAACTGGACGAAAATGACTCGGTTGAACTTTTTAGTTGGCATGCTTTTAGAAAAGCAACACCAAGAACAGAATTAAATAATCTTGCAAGATCAGCCGTTGCTTATTGTGGTGGACTACCACTCGCTCTTGAAGTCCTTGGTTCTTATTTAAGTAAGAGGTCAGAGAATGAATGGAGAAGTGTATTGTCAAAACTAGAAATAATTCCCAATACTCAAATTCAGAACATCTTAAGAATAAGCTTTGACGGCTTATGTAGTGAAATGGAAAAGGATATATTTCTTGATGTATGCTGTTTCTTTATTGGTAAAGAGAGAGACTATGTCACGGAGATACTAAATGGCTGTGGACTACGTGCTGATATTGGAATAAAAGTTCTTATAGAACGTGGTCTTGTAAAAATTGAAAAGAACAATAAACTTGGAATGCATCATTTGCTTCGGGACATGGGACGAGAGATCGTGCGTCAAACTTCAACAATGCAACCTGGGAAACGCAGTAGATTGTGGTTTCTCAAGGATGTACGTCACGTATTGACCAAGAATACTGGGACAGAAGCTATTCTGGGATTGTCTTTGAACACTGACTGGAGATTATAG 1722 0.3839 MDVSSSLSIFSKFIVAGEVFIHFLGDDIHRNFVSHLSSSLLQAGVKPSLIAVEMLSEKFMPSITRFQIGIVVFTKAYIESSRCVEDLLRIIECHENHGLIVMPVFYDIDPSDLLDLKMDSSSYVLYPMKGELKKNSSPEQRSAKRKVKTTVKWTQMKGERLNYPIILYTSAGSRALNRVANLPTWDESKHRNDAELVEEIVKSVLSKLECALPVTKFPVELETQAKNVIGLFENQPKDFCTIGIWGMGGSGKTTLAKAIYNKIPFTFGDKSFIQDIRKVCQTDGRRGLVQLQEQLLSDVLKYVKIEKGEMEKTTIENSLSGRKLFIVLDDVNEIDQLKNLCGNGKWFRAGSVIIITTRQLDLLYQQKVDYVYEMDELDENDSVELFSWHAFRKATPRTELNNLARSAVAYCGGLPLALEVLGSYLSKRSENEWRSVLSKLEIIPNTQIQNILRISFDGLCSEMEKDIFLDVCCFFIGKERDYVTEILNGCGLRADIGIKVLIERGLVKIEKNNKLGMHHLLRDMGREIVRQTSTMQPGKRSRLWFLKDVRHVLTKNTGTEAILGLSLNTDWRL* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0918 573 Pfam TIR domain 19 205 IPR000157 GO:0007165
Vra9g0918 573 Gene3D - 206 370 IPR027417 -
Vra9g0918 573 SMART till_3 16 150 IPR000157 GO:0007165
Vra9g0918 573 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 565 IPR044974 GO:0006952
Vra9g0918 573 Gene3D - 376 460 IPR042197 -
Vra9g0918 573 SUPERFAMILY "Winged helix" DNA-binding domain 447 553 IPR036390 -
Vra9g0918 573 PRINTS Disease resistance protein signature 241 256 - -
Vra9g0918 573 PRINTS Disease resistance protein signature 318 332 - -
Vra9g0918 573 PRINTS Disease resistance protein signature 411 425 - -
Vra9g0918 573 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 118 IPR035897 -
Vra9g0918 573 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 565 - -
Vra9g0918 573 Pfam NB-ARC domain 231 442 IPR002182 GO:0043531
Vra9g0918 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 470 IPR027417 -
Vra9g0918 573 Gene3D - 16 205 IPR035897 -
Vra9g0918 573 ProSiteProfiles TIR domain profile. 15 208 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0918 Vra-Chr9 10994882 10998363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0918 18 568 WRKY Transcription Factor Family AT4G12020 28.058 3.71e-57 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0918 - - vra:106773320 1128.62