Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0917 ATGGCATCTGCGTCTTCTTCTTCGTCTTTCTCAAAGTTCAGAATCGAAGGCGACGTGTTCATCCATTGTTTGGGATACGACATCCGTCGGAATTTCGTTTCTCATCTCAGTTCTGCCCTTTTGCAGGCTGGAGTAAAACCTTGCCTCCTTGCCGTGGAAATGCAGCAGGAACAATTTGTAGCATCAATTGAAGGGTTTCAGATTGGAATAGTTGTTCTCAACAAGTCATACTTTGAATCTTTTCAATGTGTTGATGAACTTGTGAGAATCATTGAATGTCACGAAACTCACGGCCTAACCGTTATGCCCGTGTTTTACGAAATGGATCGATCCGATTTTGGTAATATGTTGAAAGCAACTGCAAGAGAGGTCATGAAAGTTGAACACATAATTTGGTCAGGGGAATATCAGAAAACATGGTTCCAGAGGTGGAATGTGGCACTCACCAAAGCTGGAACTTTGCCTACTTGGGAGGAGAGCGAACACAGGAGTGATGCTGAACTAGTGGAGAAAATTGTTAAGTCTGTTCTCGCCAAACTAGACTGCCCATTGGCTATAACTAAATTTCCTATTGGGTTAGAACCCCACGTGAAAAATGTGATTGGATTCTTTGAAAATCAACCCACCAAAGTTTGTATGATAGGGATATGGGGAATGGGAGGATCGGGTAAAACTACCGTAGCCAAAGCTATCTACAATCAGATTCCTTATGCATTTGATGATAAAAGTTTCATTCAAGGTATTAGAGAAGTATGTGAAACGGATGACAGAGGCCTTGTTCATTTACAAGAAAAACTTCCTTCAGATGCCCTAGAAACAAATGTTAAAATAGAGAGTGGTGAGATGAAAAAAATTTCGTTCGAGGACAGACTTTCTGGAAAAAAGTTGTTCATTGTGCTTGACGATGTGAATGAGATAGATCAACTAAAAGACCTACTTGGAAATGATAAACGGTTTGGTCAAGGAAGTGTAATAATCATTACAACTAGAAATTTAGAGCTGCTTTATCAACTTAATGTTGATTATGTTTACGAGATGGACACAATGGACGAAAATGACTCCGTTGAGCTTTTTAATTGGCATGCTTTTGGAGAAGCAAAACCAAGAGAAGACTTCATTAAACTTGCAAGATCTGCAGTTTCTTATTGTGGTGGACTACCACTCGCTCTTGAAGTCCTTGGTTCTTATTTAAGTAAGAGGTCAGTGAATGAATGGAGAAGTGTATTGTCGAAACTAGAACTAATTCCCAATACTCAAGTTCAGAACATACTAAGAACAAGCTTTGACGGCTTATGTCTAATGGAAAAGGATATATTTCTTGATGTATGTTGTTTTTTTATTGGTAAAGACAGAGACTATGTTACAGAAATACTAAAGGGTTGTGGACTACATGCTGATATTGGAATAAAAGTTCTCATAGAACGTGGTCTTATAAAAATTGAAAAGAACAATGAACTTGGAATGCATCCTTTGCTCCGGGATATGGGACGAGAGATTGTGCGTCAAACTTCAACAATTCAACCTGGGAAGCGCAGAAGATTGTGGCTTCACAAGGATGTACTTGATGTATTGACAAAGAATACTGGGACCGAAGCTATCGAGGGATTGTCTCTGAACTGTCAGTTTACAAGCAGTGATTTCGATTTCGTCAAAGCTTGTGCTTTTGAGAAAATGAAGAGGTTGAGATTCTTGCAACTTGATCATGTACAAGTGAATGGAGATTATGGGTATCTTTCTAAGCAATTGAGATGGATCTATTGGCAAGGATTTCCTTTAGAATACATACCTATCAACTTTTATCTGAAAAAAGCAATTGTGATTGATTTCCAACGCAGTAATCTTACACTAATGTGGAGAGAACCCCAGGTGTTGCGGTGGCTGAAAATCCTCAATCTTAGTTATTCCATGTTCTTAATTGAAACTCCCGACTTTTCAAAACTACGAAGTCTTGAAAAGCTCATTGTCAAACATTGTCCAAGATTGCGCAATGTGCACCAATCCATTGGAGATCTCCGCAAACTTGTGCTAATAAATTTGAAAGGCTGTACAAAGCTACGCAATCTTCCAACTGAGACATATAAGTTGAAATCTTTGAAAACTCTCATCCTGTCTGGTTGTTTGAAGATTCACATATATGAAAAAGATATATTGTGTATGGGATCATTGACAACTCTAATTTCTGAAAATACTGCTGTGAAACAAGTTCCCTTTTCAATAGTAAGCTCAAAAAGCATTGGACATATACTTCTGGGAGGAAATAATGGATTATCATTTACTGTTTTTCAATCTATCATTTCGTCTTGGATATCACCTAAAATTAATTTCTTGTCTGGTATTCGTCCGTTTCGGGGCATATCTTCATCTCTAGTTTCCATGAGTATGGAAGATAATGATTTGGGTGATCTAGCACCAATCCTTAGCAGCGATTTAAATATTCTTAATGTTTTGGTGCAATGTGACGTGGAGTTTCAAAGATACCAACAAGTAATGGCAATTTTGGATGAGATACGAGGTCTAAACTTGACTGAATTTGAAATAAGACCATCTACACCAGAAACTTCAAAGCATCCTTTAAGACCTTATTTGATTGAATTCGGAAGTTACCAAGAAGAAGTCTTCGATATTCTCAGCAAGAGCATATTTGAGGGATCAGAAAACAGTGCATCTTGTGATGTTTTTCTCCCTGGCAACAAAATACCTTATTGGTTAGAGCATATGGGCGAGGGACATTCAGTAACTTTTACTATACCTGAGGGTCGTCGCATAAAGGGGATGACTTTGTGTGCTGTAAATTTATATAACCCCAGACACATTGCAACAACTGAATATCTTATTAGTATCTTAATGGTTAATTATACTAAGTGCACAATCCAGATATACAGGAGAAGGACAGTACAGTCCTTTAGTGATGTAGATTGGCAGGGCATAATAACAAATTTGGGACCTGGAGACAAGGTGGAGATTTTTGTGATTTTTGGAGATAAATTCCTAGTGAAGAAGACAGCTGTCTATCTAATGTGTGATGGATTAATTGACAAGGAAATGAATCCTTCTCTTGATCCAAAGAATATTGATTAA 3078 0.3788 MASASSSSSFSKFRIEGDVFIHCLGYDIRRNFVSHLSSALLQAGVKPCLLAVEMQQEQFVASIEGFQIGIVVLNKSYFESFQCVDELVRIIECHETHGLTVMPVFYEMDRSDFGNMLKATAREVMKVEHIIWSGEYQKTWFQRWNVALTKAGTLPTWEESEHRSDAELVEKIVKSVLAKLDCPLAITKFPIGLEPHVKNVIGFFENQPTKVCMIGIWGMGGSGKTTVAKAIYNQIPYAFDDKSFIQGIREVCETDDRGLVHLQEKLPSDALETNVKIESGEMKKISFEDRLSGKKLFIVLDDVNEIDQLKDLLGNDKRFGQGSVIIITTRNLELLYQLNVDYVYEMDTMDENDSVELFNWHAFGEAKPREDFIKLARSAVSYCGGLPLALEVLGSYLSKRSVNEWRSVLSKLELIPNTQVQNILRTSFDGLCLMEKDIFLDVCCFFIGKDRDYVTEILKGCGLHADIGIKVLIERGLIKIEKNNELGMHPLLRDMGREIVRQTSTIQPGKRRRLWLHKDVLDVLTKNTGTEAIEGLSLNCQFTSSDFDFVKACAFEKMKRLRFLQLDHVQVNGDYGYLSKQLRWIYWQGFPLEYIPINFYLKKAIVIDFQRSNLTLMWREPQVLRWLKILNLSYSMFLIETPDFSKLRSLEKLIVKHCPRLRNVHQSIGDLRKLVLINLKGCTKLRNLPTETYKLKSLKTLILSGCLKIHIYEKDILCMGSLTTLISENTAVKQVPFSIVSSKSIGHILLGGNNGLSFTVFQSIISSWISPKINFLSGIRPFRGISSSLVSMSMEDNDLGDLAPILSSDLNILNVLVQCDVEFQRYQQVMAILDEIRGLNLTEFEIRPSTPETSKHPLRPYLIEFGSYQEEVFDILSKSIFEGSENSASCDVFLPGNKIPYWLEHMGEGHSVTFTIPEGRRIKGMTLCAVNLYNPRHIATTEYLISILMVNYTKCTIQIYRRRTVQSFSDVDWQGIITNLGPGDKVEIFVIFGDKFLVKKTAVYLMCDGLIDKEMNPSLDPKNID* 1026
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0917 1025 Gene3D - 15 176 IPR035897 -
Vra9g0917 1025 Pfam TIR domain 18 179 IPR000157 GO:0007165
Vra9g0917 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 441 IPR027417 -
Vra9g0917 1025 Coils Coil 1024 1025 - -
Vra9g0917 1025 Gene3D - 177 343 IPR027417 -
Vra9g0917 1025 Gene3D - 348 432 IPR042197 -
Vra9g0917 1025 SMART till_3 16 154 IPR000157 GO:0007165
Vra9g0917 1025 Gene3D Ribonuclease Inhibitor 531 859 IPR032675 -
Vra9g0917 1025 SUPERFAMILY "Winged helix" DNA-binding domain 419 524 IPR036390 -
Vra9g0917 1025 SUPERFAMILY L domain-like 549 815 - -
Vra9g0917 1025 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 1005 - -
Vra9g0917 1025 PRINTS Disease resistance protein signature 213 228 - -
Vra9g0917 1025 PRINTS Disease resistance protein signature 290 304 - -
Vra9g0917 1025 PRINTS Disease resistance protein signature 383 397 - -
Vra9g0917 1025 PRINTS Disease resistance protein signature 693 709 - -
Vra9g0917 1025 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 153 IPR035897 -
Vra9g0917 1025 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Vra9g0917 1025 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1005 IPR044974 GO:0006952
Vra9g0917 1025 Pfam NB-ARC domain 195 414 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra9g0917 Vra-Chr9 10980077 10984870 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0917 18 739 WRKY Transcription Factor Family AT4G12020 29.491 2.21e-76 273
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0917 - - vun:114167169 1781.15