Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g0917 | ATGGCATCTGCGTCTTCTTCTTCGTCTTTCTCAAAGTTCAGAATCGAAGGCGACGTGTTCATCCATTGTTTGGGATACGACATCCGTCGGAATTTCGTTTCTCATCTCAGTTCTGCCCTTTTGCAGGCTGGAGTAAAACCTTGCCTCCTTGCCGTGGAAATGCAGCAGGAACAATTTGTAGCATCAATTGAAGGGTTTCAGATTGGAATAGTTGTTCTCAACAAGTCATACTTTGAATCTTTTCAATGTGTTGATGAACTTGTGAGAATCATTGAATGTCACGAAACTCACGGCCTAACCGTTATGCCCGTGTTTTACGAAATGGATCGATCCGATTTTGGTAATATGTTGAAAGCAACTGCAAGAGAGGTCATGAAAGTTGAACACATAATTTGGTCAGGGGAATATCAGAAAACATGGTTCCAGAGGTGGAATGTGGCACTCACCAAAGCTGGAACTTTGCCTACTTGGGAGGAGAGCGAACACAGGAGTGATGCTGAACTAGTGGAGAAAATTGTTAAGTCTGTTCTCGCCAAACTAGACTGCCCATTGGCTATAACTAAATTTCCTATTGGGTTAGAACCCCACGTGAAAAATGTGATTGGATTCTTTGAAAATCAACCCACCAAAGTTTGTATGATAGGGATATGGGGAATGGGAGGATCGGGTAAAACTACCGTAGCCAAAGCTATCTACAATCAGATTCCTTATGCATTTGATGATAAAAGTTTCATTCAAGGTATTAGAGAAGTATGTGAAACGGATGACAGAGGCCTTGTTCATTTACAAGAAAAACTTCCTTCAGATGCCCTAGAAACAAATGTTAAAATAGAGAGTGGTGAGATGAAAAAAATTTCGTTCGAGGACAGACTTTCTGGAAAAAAGTTGTTCATTGTGCTTGACGATGTGAATGAGATAGATCAACTAAAAGACCTACTTGGAAATGATAAACGGTTTGGTCAAGGAAGTGTAATAATCATTACAACTAGAAATTTAGAGCTGCTTTATCAACTTAATGTTGATTATGTTTACGAGATGGACACAATGGACGAAAATGACTCCGTTGAGCTTTTTAATTGGCATGCTTTTGGAGAAGCAAAACCAAGAGAAGACTTCATTAAACTTGCAAGATCTGCAGTTTCTTATTGTGGTGGACTACCACTCGCTCTTGAAGTCCTTGGTTCTTATTTAAGTAAGAGGTCAGTGAATGAATGGAGAAGTGTATTGTCGAAACTAGAACTAATTCCCAATACTCAAGTTCAGAACATACTAAGAACAAGCTTTGACGGCTTATGTCTAATGGAAAAGGATATATTTCTTGATGTATGTTGTTTTTTTATTGGTAAAGACAGAGACTATGTTACAGAAATACTAAAGGGTTGTGGACTACATGCTGATATTGGAATAAAAGTTCTCATAGAACGTGGTCTTATAAAAATTGAAAAGAACAATGAACTTGGAATGCATCCTTTGCTCCGGGATATGGGACGAGAGATTGTGCGTCAAACTTCAACAATTCAACCTGGGAAGCGCAGAAGATTGTGGCTTCACAAGGATGTACTTGATGTATTGACAAAGAATACTGGGACCGAAGCTATCGAGGGATTGTCTCTGAACTGTCAGTTTACAAGCAGTGATTTCGATTTCGTCAAAGCTTGTGCTTTTGAGAAAATGAAGAGGTTGAGATTCTTGCAACTTGATCATGTACAAGTGAATGGAGATTATGGGTATCTTTCTAAGCAATTGAGATGGATCTATTGGCAAGGATTTCCTTTAGAATACATACCTATCAACTTTTATCTGAAAAAAGCAATTGTGATTGATTTCCAACGCAGTAATCTTACACTAATGTGGAGAGAACCCCAGGTGTTGCGGTGGCTGAAAATCCTCAATCTTAGTTATTCCATGTTCTTAATTGAAACTCCCGACTTTTCAAAACTACGAAGTCTTGAAAAGCTCATTGTCAAACATTGTCCAAGATTGCGCAATGTGCACCAATCCATTGGAGATCTCCGCAAACTTGTGCTAATAAATTTGAAAGGCTGTACAAAGCTACGCAATCTTCCAACTGAGACATATAAGTTGAAATCTTTGAAAACTCTCATCCTGTCTGGTTGTTTGAAGATTCACATATATGAAAAAGATATATTGTGTATGGGATCATTGACAACTCTAATTTCTGAAAATACTGCTGTGAAACAAGTTCCCTTTTCAATAGTAAGCTCAAAAAGCATTGGACATATACTTCTGGGAGGAAATAATGGATTATCATTTACTGTTTTTCAATCTATCATTTCGTCTTGGATATCACCTAAAATTAATTTCTTGTCTGGTATTCGTCCGTTTCGGGGCATATCTTCATCTCTAGTTTCCATGAGTATGGAAGATAATGATTTGGGTGATCTAGCACCAATCCTTAGCAGCGATTTAAATATTCTTAATGTTTTGGTGCAATGTGACGTGGAGTTTCAAAGATACCAACAAGTAATGGCAATTTTGGATGAGATACGAGGTCTAAACTTGACTGAATTTGAAATAAGACCATCTACACCAGAAACTTCAAAGCATCCTTTAAGACCTTATTTGATTGAATTCGGAAGTTACCAAGAAGAAGTCTTCGATATTCTCAGCAAGAGCATATTTGAGGGATCAGAAAACAGTGCATCTTGTGATGTTTTTCTCCCTGGCAACAAAATACCTTATTGGTTAGAGCATATGGGCGAGGGACATTCAGTAACTTTTACTATACCTGAGGGTCGTCGCATAAAGGGGATGACTTTGTGTGCTGTAAATTTATATAACCCCAGACACATTGCAACAACTGAATATCTTATTAGTATCTTAATGGTTAATTATACTAAGTGCACAATCCAGATATACAGGAGAAGGACAGTACAGTCCTTTAGTGATGTAGATTGGCAGGGCATAATAACAAATTTGGGACCTGGAGACAAGGTGGAGATTTTTGTGATTTTTGGAGATAAATTCCTAGTGAAGAAGACAGCTGTCTATCTAATGTGTGATGGATTAATTGACAAGGAAATGAATCCTTCTCTTGATCCAAAGAATATTGATTAA | 3078 | 0.3788 | MASASSSSSFSKFRIEGDVFIHCLGYDIRRNFVSHLSSALLQAGVKPCLLAVEMQQEQFVASIEGFQIGIVVLNKSYFESFQCVDELVRIIECHETHGLTVMPVFYEMDRSDFGNMLKATAREVMKVEHIIWSGEYQKTWFQRWNVALTKAGTLPTWEESEHRSDAELVEKIVKSVLAKLDCPLAITKFPIGLEPHVKNVIGFFENQPTKVCMIGIWGMGGSGKTTVAKAIYNQIPYAFDDKSFIQGIREVCETDDRGLVHLQEKLPSDALETNVKIESGEMKKISFEDRLSGKKLFIVLDDVNEIDQLKDLLGNDKRFGQGSVIIITTRNLELLYQLNVDYVYEMDTMDENDSVELFNWHAFGEAKPREDFIKLARSAVSYCGGLPLALEVLGSYLSKRSVNEWRSVLSKLELIPNTQVQNILRTSFDGLCLMEKDIFLDVCCFFIGKDRDYVTEILKGCGLHADIGIKVLIERGLIKIEKNNELGMHPLLRDMGREIVRQTSTIQPGKRRRLWLHKDVLDVLTKNTGTEAIEGLSLNCQFTSSDFDFVKACAFEKMKRLRFLQLDHVQVNGDYGYLSKQLRWIYWQGFPLEYIPINFYLKKAIVIDFQRSNLTLMWREPQVLRWLKILNLSYSMFLIETPDFSKLRSLEKLIVKHCPRLRNVHQSIGDLRKLVLINLKGCTKLRNLPTETYKLKSLKTLILSGCLKIHIYEKDILCMGSLTTLISENTAVKQVPFSIVSSKSIGHILLGGNNGLSFTVFQSIISSWISPKINFLSGIRPFRGISSSLVSMSMEDNDLGDLAPILSSDLNILNVLVQCDVEFQRYQQVMAILDEIRGLNLTEFEIRPSTPETSKHPLRPYLIEFGSYQEEVFDILSKSIFEGSENSASCDVFLPGNKIPYWLEHMGEGHSVTFTIPEGRRIKGMTLCAVNLYNPRHIATTEYLISILMVNYTKCTIQIYRRRTVQSFSDVDWQGIITNLGPGDKVEIFVIFGDKFLVKKTAVYLMCDGLIDKEMNPSLDPKNID* | 1026 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g0917 | 1025 | Gene3D | - | 15 | 176 | IPR035897 | - | |
Vra9g0917 | 1025 | Pfam | TIR domain | 18 | 179 | IPR000157 | GO:0007165 | |
Vra9g0917 | 1025 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 187 | 441 | IPR027417 | - | |
Vra9g0917 | 1025 | Coils | Coil | 1024 | 1025 | - | - | |
Vra9g0917 | 1025 | Gene3D | - | 177 | 343 | IPR027417 | - | |
Vra9g0917 | 1025 | Gene3D | - | 348 | 432 | IPR042197 | - | |
Vra9g0917 | 1025 | SMART | till_3 | 16 | 154 | IPR000157 | GO:0007165 | |
Vra9g0917 | 1025 | Gene3D | Ribonuclease Inhibitor | 531 | 859 | IPR032675 | - | |
Vra9g0917 | 1025 | SUPERFAMILY | "Winged helix" DNA-binding domain | 419 | 524 | IPR036390 | - | |
Vra9g0917 | 1025 | SUPERFAMILY | L domain-like | 549 | 815 | - | - | |
Vra9g0917 | 1025 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 20 | 1005 | - | - | |
Vra9g0917 | 1025 | PRINTS | Disease resistance protein signature | 213 | 228 | - | - | |
Vra9g0917 | 1025 | PRINTS | Disease resistance protein signature | 290 | 304 | - | - | |
Vra9g0917 | 1025 | PRINTS | Disease resistance protein signature | 383 | 397 | - | - | |
Vra9g0917 | 1025 | PRINTS | Disease resistance protein signature | 693 | 709 | - | - | |
Vra9g0917 | 1025 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 6 | 153 | IPR035897 | - | |
Vra9g0917 | 1025 | ProSiteProfiles | TIR domain profile. | 15 | 180 | IPR000157 | GO:0007165 | |
Vra9g0917 | 1025 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 20 | 1005 | IPR044974 | GO:0006952 | |
Vra9g0917 | 1025 | Pfam | NB-ARC domain | 195 | 414 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g0917 | Vra-Chr9 | 10980077 | 10984870 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g0917 | 18 | 739 | WRKY Transcription Factor Family | AT4G12020 | 29.491 | 2.21e-76 | 273 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g0917 | - | - | vun:114167169 | 1781.15 |