Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0916 ATGCTTCGTTTTCTCGCAACTGTATCAAAAATTTCTCTGCCTTTACCACAATCAGCAGTTATAAAAGCTCTGCGAGTGTTCAGTTCCACCACCTGTTCGACCATTTGCCTCACCCAAACCAAGATTGAAGTTGAAGATGATAAAAACAAATGGAGTGATGCTACTGAACTTTTGAGCAAATGGGGTTGCAGTGATGATGATTTGGAGAGAATTTTCTCGCGCTGTCCCTCTTTGCGCAATGCTGATCCCACGCTGGTTCAATCTAAACTGTGCCTGCTTAGTGATTTGGGCTTGCGTGCTTCTCAACTTGTGAAGATTGTCAATTGTAGACCACGGTTTTTCCAGTCTCGGATTAACTCTTTTCTAGAAGAGAGGATTGAACATCTTACATCATTGTTTGAGTCCAGGGATGTGCTTCAAAAGGCCATCGTGAGGAACCCTTCATTGTTGCTATCGGAGGGTCGCTATGATGTTAAGGCTACAGTTGAGCTCTATGAGAAGTTGGGTGTTAAGAAGGAGGACTTAGTTCAGATGCTGCTTTTGCGGCCCACGGTTATTTCAAGGACTTCCTTTGATGCTGAGAAGCTGGAATATTTAAGAAAGACTGGGCTTGCTACGGATTCAAAGATGTATAAATATATGGTGACTTTAATTGGAATCTCTCGCGTAGAAACTATCCGGGAGAAGGTGGCGAATTTGGGAAAGTTTGGGTTTTCTGAAGAGGAGATATTTGGTCTTATGGGGAGGTCTCCTAATGTTTTGACATTGTCGACAGACAAGGTTCAGAGGAACATGACTTTCATTTTGGGCACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCAGCCGTATTTATTGTATGCTAACGTGGATACTGTTTTGAAGCCAAGAGTTCTACTAGCATTGAAGATTCAAGATATGGATTCAAAGTGGAAAATCATAGGACCAACTATAGTAAGTTTTCTTAGGATGCCAGAGAAGAGATTTTTGGACTTGTTGGTCAAATGCCATGGCGAGGATGTTGCCAATGAATTGATGGATTTCTATAAAAGGACAAAAGAGGTCAAGAGATTAGGAGAGTCATCAAAGAAGTGCAGTACGAGAGGATTCCCTTTCTGA 1119 0.4191 MLRFLATVSKISLPLPQSAVIKALRVFSSTTCSTICLTQTKIEVEDDKNKWSDATELLSKWGCSDDDLERIFSRCPSLRNADPTLVQSKLCLLSDLGLRASQLVKIVNCRPRFFQSRINSFLEERIEHLTSLFESRDVLQKAIVRNPSLLLSEGRYDVKATVELYEKLGVKKEDLVQMLLLRPTVISRTSFDAEKLEYLRKTGLATDSKMYKYMVTLIGISRVETIREKVANLGKFGFSEEEIFGLMGRSPNVLTLSTDKVQRNMTFILGTMKLDAKMVLKQPYLLYANVDTVLKPRVLLALKIQDMDSKWKIIGPTIVSFLRMPEKRFLDLLVKCHGEDVANELMDFYKRTKEVKRLGESSKKCSTRGFPF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0916 372 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 17 372 - -
Vra9g0916 372 PANTHER CGI-12 PROTEIN-RELATED 17 372 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 Pfam mTERF 114 330 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 Pfam mTERF 56 149 IPR003690 GO:0003690|GO:0006355
Vra9g0916 372 Gene3D Transcription termination factor 3, mitochondrial 198 343 IPR038538 -
Vra9g0916 372 Gene3D Transcription termination factor 3, mitochondrial 28 197 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vra9g0916 mTERF 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0916 K15032 - gmx:100799629 598.586