Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g0912 | ATGGGCTCATCGATTCCTTCCCAGGAATTTGCCTCTTCATCATCCAAACTCCCATGGATGTACGATGTGCTCATCAACTTTACCGGAGACAAAATCCGTAACAAATTTGTTTCCCATCTAGATTCTGCCCTTTCTAGTGTTGGATTTACCACTTTTCTTCACCACCACAATGCAGTGAAGCCAATGCACATCCAACAACAACAACCTATTCTGGATCTCTGTCGAGTAGCAATTGTTGTTTTCACCAAAACCTACTCTCAATCTGCTTGGTGTCTTTATGAACTTCAACAAATCATTGAATGGCACGAATTTTATTGCCGACATGTTTTGCCCGTATATTACGAAATTTCACCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCGAAGCTACTGCATGTCAAACCTTTTCAAGACAACAACTCGAGCATGGGATATCCAGGTGGAGCCACGCACTCACCAAAGCAGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGCGATGCTGAACTAGTAGACAAAATTGTTAAGACTGTTCTTAATTTATCAGTCTTATCTGCTACTAAATTTCCAGTTGGATTACAACCCAAGGTACAAGATCTTNTTCGAACTATCAAANATAAATCCACGGAAGTTTGTACAATAGGGATATGTGGAATGGAAGGATCTGGTAAAACCACCCTTGCCAAAGCTATCTACCATCAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGTTACTCTAGAAGGTAAAGGAATAAGAAGTTGTGTTAGTTTACAAGAACAACTTCTTTCAGATGTCTTAAAAACAAAGGTGAAAATACCTGGAGATGAGATGGGAAGATGTATGATTCGAGAAAGACTTAATGGGAAAAGGGTGCTCATTGTACTTGACGATGTGAATCAGTATGGTCCATTAGACCTGTGGGAAACTAGTTCATGCTTCGGTGAAGGTACTGTAATAATCATTACAACAAGAGATGAATACCTACTTAGGAGACATCAAGCTGACTCTGTTTTTCGGATAAATCTAATGAACGAAAACGAGTCTCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACGATTACCTGGCAAGAAGAGTAATTTTTCATTGTAGAGGACTACCTCTGACTCTTGAAGTCATTGGAGCTTATTTATTTGAAACGAGCAGAAAAAAATGGGAAGTTGTATGGTATAAATTAGGGAAAATTCCGTATGACAATGTTCAACTGATATTAAAAATAAGCATTGATGGTTTACGCAATGAAATGGAAAAAGCTTTATTCCTTGATGTTTGTAGATTCTTTGTTGGTAAAAGCAAAGCTTATGTTACGAAGATCCTAGACGGCTGTAAAGTAGACGTTGATAATGGAATAAGAGTTTTGATAGAGCGTAACCTCATAAAACTTAAAAGAAACAATAAATTTGGAATGCATCATTTGCTACCAGGAATGGCAATGCAAATTGTTGCTCAAGAGCATCCATCATATGCACGGGAAGAGACTGATGTCTTTTGGAGATTTCCTGATAAACTGTTTTCAACCGGAAAAGATTGCTTCAAACCTTATCCTTTGGAGATAAGACACAAATCAAGAGTGCTGAAACTCGCTGGAAATCATGGGTACCTTCGGAATTCTTCAGAATTCGTAGCTTACGACTTTAATCTGTATGATGATGCAGTATCGATTGATTTAAGACACAGTTTGCTTGGACACGACTGGAAAAAACTGCAGGTTTTGGCGTGGCTAAAAGTCCTGAATCTTAGTCATTCCAAGTACTTAACAAAAACTCCTGACTTTTCGAGACTTCCAAGTCTTGAACAACTCATTCTCAAAGATTGCCCTAGATTGCGCCAATTACACCAATCTATTGGATGTCTTTGCAATCTTACACTGCTAAATTTGAAGGACTGCATATGTCTAAGCAATCTCCCGAGAAAGATATATATGTTGAAATCTTTAAAAACTCTCATTCTCTCTGGTTGTTCGAAGATTTATCTAATGGAAAAGGATATAGTCCAAATGGAATCCTTGATATCTCTAATTTCTGAAAATACAGCCATTAAACAAGTGCCTTTTTCAATTGTAAGCTCAAGAAACATTGGATATATATCTTTACATCGATTTGAGGGACTGTCACGTAATCTTTTTCATTTTATCATTCGGTCTCGGATGTCACTAACAATCAATCCCCTGTCTTATATTCATTCGTTCATGGATACGGAGGATAATAGTTGGGATGTTATCGCACCATTCTTTAGCAGCCTTGTAAATCTTCGAAGCGTTTTGGTTCACTGTGACCCCGAGTTTCAACTATCTCAGCAAGTGAAAACTATTCTGGTTGAATATGGCGTGAATATTACAGAATCAAGAATTTCAAAGCATTGCTTCAGGTCTTCTTTGGTTGGTGTTGGAAGATACAATGAATTCTTAAGTACTGTATTGGAAAGCAGTGAGTCAGGTGATGTTTCTCTTCCAAGTGACAATGATCCTTATTGGTTGGCCCATATAGGTGAGGGACATTCTGTTTCGTTCACTGTGCCTCAAGATCGTGTCATGAAGGGAATAGTTTTGTATGTTGTTTATTTATCAACCCCGGGAATCGTGACAACTGAATGTTTTACAAGTGTCTTAATTGTTAATTACACAAAGTCCACACTACTTATGCACAACCATGGCACAGTAATTTCCTTTAATGATGAAGATTGCCATGATATAATGTCAAATTTAGGATCAGGAGACAAGGTGGAGATTTTTGTGACTTTTGGTCATAGATTAATGGTCAAGAACACAGCTGTCTATTTGATATGTTGTGAATCACAAGACTTGGAAAGAGAGCCTGCGCTTAACAAAAATTCCCTCATTACATTCTTTAAGAAAATTGTAATGTGA | 2934 | 0.3766 | MGSSIPSQEFASSSSKLPWMYDVLINFTGDKIRNKFVSHLDSALSSVGFTTFLHHHNAVKPMHIQQQQPILDLCRVAIVVFTKTYSQSAWCLYELQQIIEWHEFYCRHVLPVYYEISPSDVRLQKGDFGKAFEATACQTFSRQQLEHGISRWSHALTKAANFFGWDESNYRSDAELVDKIVKTVLNLSVLSATKFPVGLQPKVQDLXRTIKXKSTEVCTIGICGMEGSGKTTLAKAIYHQIHGTFTEKSFIEVTLEGKGIRSCVSLQEQLLSDVLKTKVKIPGDEMGRCMIRERLNGKRVLIVLDDVNQYGPLDLWETSSCFGEGTVIIITTRDEYLLRRHQADSVFRINLMNENESLELLSWHAFREAKPKEEYDYLARRVIFHCRGLPLTLEVIGAYLFETSRKKWEVVWYKLGKIPYDNVQLILKISIDGLRNEMEKALFLDVCRFFVGKSKAYVTKILDGCKVDVDNGIRVLIERNLIKLKRNNKFGMHHLLPGMAMQIVAQEHPSYAREETDVFWRFPDKLFSTGKDCFKPYPLEIRHKSRVLKLAGNHGYLRNSSEFVAYDFNLYDDAVSIDLRHSLLGHDWKKLQVLAWLKVLNLSHSKYLTKTPDFSRLPSLEQLILKDCPRLRQLHQSIGCLCNLTLLNLKDCICLSNLPRKIYMLKSLKTLILSGCSKIYLMEKDIVQMESLISLISENTAIKQVPFSIVSSRNIGYISLHRFEGLSRNLFHFIIRSRMSLTINPLSYIHSFMDTEDNSWDVIAPFFSSLVNLRSVLVHCDPEFQLSQQVKTILVEYGVNITESRISKHCFRSSLVGVGRYNEFLSTVLESSESGDVSLPSDNDPYWLAHIGEGHSVSFTVPQDRVMKGIVLYVVYLSTPGIVTTECFTSVLIVNYTKSTLLMHNHGTVISFNDEDCHDIMSNLGSGDKVEIFVTFGHRLMVKNTAVYLICCESQDLEREPALNKNSLITFFKKIVM* | 978 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g0912 | 977 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 561 | 950 | IPR044974 | GO:0006952 | |
Vra9g0912 | 977 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 26 | 520 | IPR044974 | GO:0006952 | |
Vra9g0912 | 977 | Pfam | TIR domain | 21 | 185 | IPR000157 | GO:0007165 | |
Vra9g0912 | 977 | ProSiteProfiles | TIR domain profile. | 19 | 188 | IPR000157 | GO:0007165 | |
Vra9g0912 | 977 | CDD | AAA | 222 | 351 | - | - | |
Vra9g0912 | 977 | SUPERFAMILY | L domain-like | 544 | 777 | - | - | |
Vra9g0912 | 977 | SMART | till_3 | 20 | 162 | IPR000157 | GO:0007165 | |
Vra9g0912 | 977 | Gene3D | Ribonuclease Inhibitor | 540 | 807 | IPR032675 | - | |
Vra9g0912 | 977 | SMART | AAA_5 | 216 | 357 | IPR003593 | - | |
Vra9g0912 | 977 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 11 | 165 | IPR035897 | - | |
Vra9g0912 | 977 | Pfam | NB-ARC domain | 212 | 432 | IPR002182 | GO:0043531 | |
Vra9g0912 | 977 | Gene3D | - | 352 | 442 | IPR042197 | - | |
Vra9g0912 | 977 | PRINTS | Disease resistance protein signature | 219 | 234 | - | - | |
Vra9g0912 | 977 | PRINTS | Disease resistance protein signature | 294 | 308 | - | - | |
Vra9g0912 | 977 | PRINTS | Disease resistance protein signature | 386 | 400 | - | - | |
Vra9g0912 | 977 | PRINTS | Disease resistance protein signature | 663 | 679 | - | - | |
Vra9g0912 | 977 | SUPERFAMILY | "Winged helix" DNA-binding domain | 422 | 514 | IPR036390 | - | |
Vra9g0912 | 977 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 561 | 950 | - | - | |
Vra9g0912 | 977 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 26 | 520 | - | - | |
Vra9g0912 | 977 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 445 | IPR027417 | - | |
Vra9g0912 | 977 | Gene3D | - | 185 | 348 | IPR027417 | - | |
Vra9g0912 | 977 | Gene3D | - | 13 | 184 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g0912 | Vra-Chr9 | 10904594 | 10908183 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g0912 | 6 | 769 | WRKY Transcription Factor Family | AT4G12020 | 27.251 | 2.71e-46 | 179 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g0912 | - | - | vun:114165123 | 1216.83 |