Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0908 ATGGAAGGATCAGGTAAAACCACCCTTGCCAAAGCCATCTACCATCAAATCCATGGTACATTCATTCATAAAAGTTTCATTGAAGATATTGCACAAGCTAGAGAACCAAGAGGGCGTATTCATTTACAAAAACAACTTCTTTCAGATGTCCTAGAAACAAAGGCGAAGATAAATACCGTTGAGATGGGAAGAAATATGATTCGGGACAGACTTTTTGGGAAAAGGGTCCTCATCGTACTTGACGATATGGATGACTATCTTCCATTATTAGATATAAGTAAAAGTCGTTCATGGTTAAGTGCAGGAACAGTAATAATAATGACAACAAAGGACGAAGACCTATTTAGCAAATATCAAGTTGATTCTGTTGTTCGGATAAATCTAATGAATGAAAACGAGTCCCTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCACAAAAAAAATACGATTACCTTGCAAGAAGTGTAGTTACTCATTGTGCAGGACTACCTCTAGTTCTTGAAGTCATTGGAAGTACCTTATTTGAAAGGACGGAAGAGGAATGGTATAGTGTATTGTATGAATTACATAAAATTCCCATGCACCGTGTTCAACGGAAATTGGAAATAAGCTTGGACCGTTTACGTAATCAAATGGAAAGGGATTTATTCCTTGATTTATGTTGTTTCTTTGTTGGTAAGGACAGAGCCTATGCTACGAAGATCCTAAATGGCCCTCGAGTAGAAGCTGATAGTGGAATAAGAGTTCTCATGAAGCGTAACCTCATTAAAGTCAAAAGGAATAACAAATTTGGAATGCATCCTTTACTACAAGAAATGGGAATAGCAAATTTTTGTGAGATTTCAAGAGAGAAACGTGGGAAGAACCGTCAACTGTTGTTTGATGTGGATGCAGAATATTCATTGCAAGTGTACGCTATAAGAACATTCTTTGAGAGAAAAGATTATGAGGTATTGCCTGTCTTGCTTTCAACAAGAAGAGAACCATCAAGACTTCCGAAAGACGGTGTAAATTCTGAGAACCTTTCTCCAAAATTGAGATGGATTAGTTTCCGTGGGTTTTCTATAGAATACCTACCCAACTACTTTAATGCGCATGATACCACAGCGATTGAAATAAAACACAGTCTTCTTCAATTCTTTTGGGAAGAACCCCAGGTTTTGAGATCACTGAAAGTCCTTAACCTTAGTCACTCCATGTACTTGACAGAAACACCTGACTTTTCGAGACTACCAAATCTTGAAGAACTCATTCTAAAAGATTGTCCGAGATTGCAGGAAGTACACCAATCTATTGGACATCTCTGTTATCTTATACTACTCAATTTGAAGGACTGTAAACGTCTAAGCAATCTCCCCCAAGAGATATATAGGTTGAAATCTTTAAAAACTCTTATCCTCTCTGGGTGTTCGAAGATTGACCCAATGGAGAAAGATATAGTGCAAATGAAATCCTTGATAACTCTAGTTGCTGAAAATACAACTGTGAAAAAAGTTCCTTTTTCAATTGTAAGTTCAAAAGCCATTGGATATATATCCTTACAAGGATTTGAGAGATTGTCACGTAATTCTTTTCTTTCCATCATTATTCGGTCTTTGATTTCGCCGACAATGAATCCCATATCTTATATTCATTCCTTGTGCATGGATATCGATAACAATTGGGAAGACATTGGACCATTGCTTAGCAGCCTGGAAAATCTTCGAAGTGTTTTGGTTCAATGTGACACCGAATTTCAATTATCTGAGCAAGTAAAAAATATTCTGGTCTACTATTTTTCAAAATTTACCCAATCAGAAATTTCAAAGCAGAACTCCAGATCTTCTTTGATTGGTGTTGGAGCATACCTTGAATTCTTCAATGCTGTCCGAGATAACATATCTGAGGTATTGGCAAGTAGTGAGTCTTCTGATGTCAACCGCCCTTATTGGTTGGCCTATATGGGTGAGGGAGATTCTGTTTCTTTCACTGTGCCTCTGGATAATGACATTAAGGGAATGGTTTTGTGTGTTGTTTATGTATCAACCCCTGAAATTGAGGCAACTGAATGTCTTAGAAGTGTTTTAATTGTTAATTACACAAAGTGCACTTTACAGATACACATGCATGGCAAATTAATTTCCTTTAATGATATATATTGGCAGACTATAAGGTCAAATTTAGGATCAGGAGACAAGGTGAAGATTTTTGTGAATTTTTCTCAAGGATTGGTAGTCAAGAATACATATGTCTATCTTATATGTGGTGATTCACATTACTTGGAAAAAGAGCCTACTCCAAACAAAAATTAG 2301 0.3672 MEGSGKTTLAKAIYHQIHGTFIHKSFIEDIAQAREPRGRIHLQKQLLSDVLETKAKINTVEMGRNMIRDRLFGKRVLIVLDDMDDYLPLLDISKSRSWLSAGTVIIMTTKDEDLFSKYQVDSVVRINLMNENESLELLSWHAFREAKPQKKYDYLARSVVTHCAGLPLVLEVIGSTLFERTEEEWYSVLYELHKIPMHRVQRKLEISLDRLRNQMERDLFLDLCCFFVGKDRAYATKILNGPRVEADSGIRVLMKRNLIKVKRNNKFGMHPLLQEMGIANFCEISREKRGKNRQLLFDVDAEYSLQVYAIRTFFERKDYEVLPVLLSTRREPSRLPKDGVNSENLSPKLRWISFRGFSIEYLPNYFNAHDTTAIEIKHSLLQFFWEEPQVLRSLKVLNLSHSMYLTETPDFSRLPNLEELILKDCPRLQEVHQSIGHLCYLILLNLKDCKRLSNLPQEIYRLKSLKTLILSGCSKIDPMEKDIVQMKSLITLVAENTTVKKVPFSIVSSKAIGYISLQGFERLSRNSFLSIIIRSLISPTMNPISYIHSLCMDIDNNWEDIGPLLSSLENLRSVLVQCDTEFQLSEQVKNILVYYFSKFTQSEISKQNSRSSLIGVGAYLEFFNAVRDNISEVLASSESSDVNRPYWLAYMGEGDSVSFTVPLDNDIKGMVLCVVYVSTPEIEATECLRSVLIVNYTKCTLQIHMHGKLISFNDIYWQTIRSNLGSGDKVKIFVNFSQGLVVKNTYVYLICGDSHYLEKEPTPNKN* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0908 766 SUPERFAMILY L domain-like 345 572 - -
Vra9g0908 766 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 749 IPR044974 GO:0006952
Vra9g0908 766 Pfam NB-ARC domain 1 215 IPR002182 GO:0043531
Vra9g0908 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 223 IPR027417 -
Vra9g0908 766 Gene3D - 1 124 IPR027417 -
Vra9g0908 766 Gene3D - 129 219 IPR042197 -
Vra9g0908 766 PRINTS Disease resistance protein signature 70 84 - -
Vra9g0908 766 PRINTS Disease resistance protein signature 163 177 - -
Vra9g0908 766 PRINTS Disease resistance protein signature 460 476 - -
Vra9g0908 766 Gene3D Ribonuclease Inhibitor 332 483 IPR032675 -
Vra9g0908 766 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0908 Vra-Chr9 10867535 10870730 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0908 360 554 WRKY Transcription Factor Family AT5G45050 28.934 3.74e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0908 - - vun:114165880 1088.17