Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0906 TTTGTGTCCATTCTCATTTTGGGTTATTTTTGTTGCAGAAATGAAAATGATCTCATGAAGGAAATTGTTTGTAAGGTTTTGAAAAGACTGGATAGAACATACTTGTCTATCACAAACTTTCCAGTTGGACTAGAATGCCGTCTGCAGCATGCTATTGACTTTATTAGAAATAAAAAAATAGGAACCTGTATATTAGGAATTTGGGGAATGGGAGGGATTGGCAAAACAACCATAGCCAAATCCATTTACAATGAAATTCGTCATGAATTCAAATATAGAAGTTTTCTTGCAAATATTAGAGAAGTTTGGGGAGGAGATCGGGGCCCAATTGATTTGCAAGAACAGCTTCTTTCAGATATCCTTAAAACAACAAAGACAAACGTGCATAGCATTGATTGGGGAAAAGGAAAGATCAAAGAAATGCTTTGCACAAAAAAGGTACTTGTTGTTCTTGATGATGTGAACATCTTTGAACAATTAATTGCATTATGTGGAAATCGTAATGAAATCAGTCGAGGAAGTGTAATAATCATTACCACCAGAAACGTACGTCTACTCGAAGAGATTGGAGTTGACTATGTGCATGGAGTTGAGAAAATGAATAAAATTGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGGAGAGCAAATCCAACTAGGGACTTTTTTGAAGTCTCAAAGGAAGTAATCACATACTGCGGAGGGCTACCACTAGCTCTTGAAGTTCTTGGATCTTACTTATACAAGAGAAAAAAAGAAGAGTGGCAAAGTGTATTATCAAAATTAAAAGAAATACCAAATGATAAAATACAAGAGAAATTGAAAATAAGCTATGATGGTTTATCAGATCATATGGAGAAGGACATATTTCTTGACATATGCTGCTTCTTTATTGGTAAGGACAGAGGCTATGTCACAGAGATACTAAATGGTTGTGGACTTCATGCTGATATTGGAATACCAGTACTAGTAGAAAGGAGCCTCATCAAGGTTGAGAAGAATAACAAGCTCGGAATTCATGATTTACTACGTGACATGGGAAGAGAAATTGTTCGTCAAAGTTCACCGCTACCACAAAAGCGCAGTAGATTATGTGTTCATGATCACGTACTTGATATATTGACTGAACATACCGGAACAGAAGCCATTGAGGGATTAGCTTTGAAATTGCATAGACCTGGCAGAGTTCACTTCAGTGCCAAAACATTTGAGAACATGAAAAGACTGAGAATTTTGCAATTTGATCATGTCCAACTTGCTGGAGATTATGGGCATATTTCCAAACACTTGACATGGGTCTATTGGCGAGGATTTTCATTAAAATACATACCTGATAACTTTTATCAGGGAAACGTAGTTGCTATTGACATGAAACACAGTAATCTTAAGCTAGTATGGAAGGAGCCCCTACAACAGAGGCTGGAAAGGCTAAAGTTCATCAATCTTAGTCATTCCAAGTTGTTGTCAAAGACCCCTGACTTTTCAAAACTACCAAATCTTGAGAGAGTCATTCTCAAAGATTGTCCAAACTTGTCTGAGCTGCACCATTCCATTGGAAATCTGCCTAATCTTCTTATTTTAAATTTGAAGGACTGTATATGCCTTCGGAATCTCCCAGTGATAAAATCGAAGTCTTTAAGAGTACTCATCCTTTCTGGTTGTTCAAAGATCGACAAGTTAGAAGAAGAAATAGTGCAGATGGAATCGTTAACAACTCTAAGGGCAGAGAATACTAGCCTAACACAAGTGCCATTTTCTATAATAAGATTAAAAAAGATTGGGTTTATATCACTTTGTGGATATGAAGGATTAGCAAGTGTTTTGTTTCCTTCTATCATATGGTCTTGGATGTCGCCAACAACAGGTCGTGTATCCTCTATGCAATCACTTGGAAGCATTTCAACATCTTTAGTCTCTGTCCATCTACAGGATAATAATTTGGGTAACCTACTATCAAAGCTTAGTGAGTTTTCAAAACTTCGAAGCATTTGCGTGCAATGTAACTCAGATCTTCAACTAACTCAAGAATTAAGAAGAATAGTGGATGACTTCTGCAAAGTACATTCTGCAATGGAAACAACCTATGCACCACAAATTTTAGAAAATTCTATGGTATCTCGTTTAATTGGATTTGGAAGTCACTACCGAGTCATGGATATGCTTAGCAATGATATGACAGAGGTTGATTCTATCTCTCTAATCTCTCGCCTTTCTTTTTCTTTGTGTGTGTGA 2235 0.3669 FVSILILGYFCCRNENDLMKEIVCKVLKRLDRTYLSITNFPVGLECRLQHAIDFIRNKKIGTCILGIWGMGGIGKTTIAKSIYNEIRHEFKYRSFLANIREVWGGDRGPIDLQEQLLSDILKTTKTNVHSIDWGKGKIKEMLCTKKVLVVLDDVNIFEQLIALCGNRNEISRGSVIIITTRNVRLLEEIGVDYVHGVEKMNKIESLELFSWHAFRRANPTRDFFEVSKEVITYCGGLPLALEVLGSYLYKRKKEEWQSVLSKLKEIPNDKIQEKLKISYDGLSDHMEKDIFLDICCFFIGKDRGYVTEILNGCGLHADIGIPVLVERSLIKVEKNNKLGIHDLLRDMGREIVRQSSPLPQKRSRLCVHDHVLDILTEHTGTEAIEGLALKLHRPGRVHFSAKTFENMKRLRILQFDHVQLAGDYGHISKHLTWVYWRGFSLKYIPDNFYQGNVVAIDMKHSNLKLVWKEPLQQRLERLKFINLSHSKLLSKTPDFSKLPNLERVILKDCPNLSELHHSIGNLPNLLILNLKDCICLRNLPVIKSKSLRVLILSGCSKIDKLEEEIVQMESLTTLRAENTSLTQVPFSIIRLKKIGFISLCGYEGLASVLFPSIIWSWMSPTTGRVSSMQSLGSISTSLVSVHLQDNNLGNLLSKLSEFSKLRSICVQCNSDLQLTQELRRIVDDFCKVHSAMETTYAPQILENSMVSRLIGFGSHYRVMDMLSNDMTEVDSISLISRLSFSLCV* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0906 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 294 IPR027417 -
Vra9g0906 744 Gene3D - 199 283 IPR042197 -
Vra9g0906 744 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 731 IPR044974 GO:0006952
Vra9g0906 744 PRINTS Disease resistance protein signature 64 79 - -
Vra9g0906 744 PRINTS Disease resistance protein signature 141 155 - -
Vra9g0906 744 PRINTS Disease resistance protein signature 234 248 - -
Vra9g0906 744 PRINTS Disease resistance protein signature 542 558 - -
Vra9g0906 744 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 731 - -
Vra9g0906 744 SUPERFAMILY "Winged helix" DNA-binding domain 269 358 IPR036390 -
Vra9g0906 744 Pfam NB-ARC domain 56 279 IPR002182 GO:0043531
Vra9g0906 744 Gene3D - 12 194 IPR027417 -
Vra9g0906 744 SUPERFAMILY L domain-like 389 672 - -
Vra9g0906 744 Gene3D Ribonuclease Inhibitor 397 542 IPR032675 -
Vra9g0906 744 Gene3D Ribonuclease Inhibitor 543 688 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0906 Vra-Chr9 10861558 10864717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0906 42 702 WRKY Transcription Factor Family AT5G45050 29.107 8.20e-64 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0906 - - vra:106773314 1472.99