Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g0902 | ATGGATATCGCCTCCTCATCATACAAACTCCCATGGAAGTACGATGTGCTGATCAACTTCACTGGAGAAGACATCCACAGAAAATTTGTTTCTCATCTCAATTCTGCCTTCTCTACTATTGGTCTCACCACTTTCCTTCATCACCCCAATGCAGTGAAGTCTACTCACATCCAACAACCTATTCTCAGCAACTGTCGAGTAGCAATTGTTGTTTTCACCCAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATCAAATGGCACGAAACTTATTGCCGACATGTTCTTCCCGTATATTATGAAATCCAGCCATCTGATGTACGTCTTCAAAAGGGTGACTTTGGAAAAGCCTTGAAGGCAACTGCTCAACAAACATTTTCAGGAGAAGAATTGGTGCATGGAATGTCCAGGTGGAGCCATGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGTGATGCTGANTTAGTGGAGAAAATTGTTAAGAGCGTTGTTAATTTACCAATCTTGTCTGCTACTAAATTTCCAGTTAGATTACAATCATACGTGGAAGATCTGATTCAAACTATCAAAAATAAACAATCGGAAGTTTGTATCATAGGAATAGGTGGAGAGGAAGGATCTGGTAAAACCACTATTGCCAAAGCGATCTACAATCAAATTCATTGGACATTCAAGGAGAAAAGTTTCATTGAAAATATTTCACAAGTTAGCGGAATAAGAGGGCATCTTCGTTTACTAGAACAACTTCTTTTAGATGTCCTAAAACAAAAGGTGGAGATTCCTAGCATTGATGTGGGAAGAACTATAATTCGGGAAAAGCTTTCTGGGAAAAGGATGCTCATTGTACTTGACGATGTTTCCAACTTTAGTTTATTCGACATATGGGATTTTCGTAAATGGTCCGTTGAAGGAACTGTTATAATCCTTACATCAACATATATAGAACCGCTGAGAGGAGGTGATTCTGTCTTTTGGGTAAAGCGAATGAACGCAGAGGACTCCCTTGAGCTTCTTAGTTGGCACGCATTTAAAGAACCAAAACCAAAAGAAGAATACAAAGACCTTGCAAGAAGTGTAGTTAGATATTGTGCAGGACTACCACTAGCTCTTGAAGTCGTTGGAAGTGCTTTATTTGAAAAGACCAAAGAAGAATGGAACAATTTATTGTTTGCGATATATGGCATGCGTTGTGTTCCAAAGATAATAAAAATAAGCATCGAAGGTTCACTGAATGAAATGGAAAAAGATATATTCCTTGATATATGTTTTTTCTTTGTTGGTAAGAGCAGAGCCTATGTTAGGAAGATCCTAAATGGCTGTGGAGTAGACGCTGATATTGGAATAAGAGTTCTCATCCAGCGTAACCTCATCAAAATTAACAAGAACAACAAATTTGGAATGCATCATTTGCTACAAAACATCGGAATGAAAATTATTCATGAAAATTCAGGAAAGGATCTTGGGAAGAACAGACGACTGTGGTTTGATAAGGATACAAAATATGGGACAGAAGCCCTGCAGTGGTTGCCTGTGAAACTGCTCACTGCCATCGAAAGTCTACAACCGACTGCAATTTCTTATGACCTTCTTAATAAAATAAGATGGATCAGTTCGCATGGGCTTTCTTCAGAATATCTGCCTAACAACATTTATGAGGATGATGCAACAGCTATTGATTTAAAACGCAGTCTTCTTCGATTTCTCTGGAAAACACCCCAGGTTTTGAGAGCACTAAAAGTCCTTAACCTCAGTCACTACGAGCATTTAACTACAACCCCTGACTTTACCGGATTACCAAGTCTTGAACACCTCATTTTCAAATATTGTTCAAGATTGCGCGAAGTACACCGATCTATTGGATCACTCAACAGTCTTATACTCCTAAATTTGAAAGACTGTACAAGTCTAAACTATCTTCCAATAGAGATATATGACTTGAAATCATTAAGAACTTTCATTCTCTCTGGTTGTTCCAAGATTGACATAATGGATAAAGATATAGCAAAGTTGGAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTCAAACATGTGCCTTTTTCAATTGTAATCTCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAAGGATTATCTCATAATCTTTTTCCATCTATCATTCGGTCTTGGATGTCTCCAATAATGAATCCCATCTCTTATATTCATTCGTTTTGCATGGATACTGAGGATAATACGATTGATATTGCACCGTTGCTTAGCACCCTTGCAAATATTCGAAGTGTTTTGGTAGCATGTGACACCGAATTTCAGTTATCTAAGCAAGTGAAAAATATTTTGGTTGAATATTTTGCGAATATTACAGAATCAGGAATTTCAAAGCAGCACTTCAGGTATTCTTTGATTGGTGTTGGAGCATACCATCAATTCTTTAATGCTGTCAGCGATAACATATATCAGGTATTGTCAAGCAGTGAGTCTGGTGATGTTTGTCTCCCAGCTGTGAATGATCCTTATTGTATGGCCCATATGGGTGAGGGACACTCTGTTTCTTTCGTTGTGCCTGAAGATGGTGATTTGAAAGGAATGATTTTTTGTGTTGTTTATTTATCAACTCCTAAGATCATTGAACCTCAATTTACTACTGTCGTAATTGTTAATTACACAAAGTGCACATTCCATATACACAACCATGGCACAACAATTTCTTTTAAAGATGGAGATTGGCATGGCATAATGTCAAATTTAGAATGTGGAGACAATGTGGAGATATTTGTGAACTTTGGTAATGGATTGGTGGTCAAGAACACAACGGTGTATCTGATACGGGGTGAATCAGAGAACATGGAAAAAGCGTCTGAGACAAAAAAACATTCTCTCATTAGATTCATAAAGAAAGTTGTAATGTGA | 2931 | 0.3767 | MDIASSSYKLPWKYDVLINFTGEDIHRKFVSHLNSAFSTIGLTTFLHHPNAVKSTHIQQPILSNCRVAIVVFTQTYSQSAWCLHQLQQIIKWHETYCRHVLPVYYEIQPSDVRLQKGDFGKALKATAQQTFSGEELVHGMSRWSHALTKAANFFGWDESNHRSDAXLVEKIVKSVVNLPILSATKFPVRLQSYVEDLIQTIKNKQSEVCIIGIGGEEGSGKTTIAKAIYNQIHWTFKEKSFIENISQVSGIRGHLRLLEQLLLDVLKQKVEIPSIDVGRTIIREKLSGKRMLIVLDDVSNFSLFDIWDFRKWSVEGTVIILTSTYIEPLRGGDSVFWVKRMNAEDSLELLSWHAFKEPKPKEEYKDLARSVVRYCAGLPLALEVVGSALFEKTKEEWNNLLFAIYGMRCVPKIIKISIEGSLNEMEKDIFLDICFFFVGKSRAYVRKILNGCGVDADIGIRVLIQRNLIKINKNNKFGMHHLLQNIGMKIIHENSGKDLGKNRRLWFDKDTKYGTEALQWLPVKLLTAIESLQPTAISYDLLNKIRWISSHGLSSEYLPNNIYEDDATAIDLKRSLLRFLWKTPQVLRALKVLNLSHYEHLTTTPDFTGLPSLEHLIFKYCSRLREVHRSIGSLNSLILLNLKDCTSLNYLPIEIYDLKSLRTFILSGCSKIDIMDKDIAKLESLITLIAENTAVKHVPFSIVISKSIGYISLRGFEGLSHNLFPSIIRSWMSPIMNPISYIHSFCMDTEDNTIDIAPLLSTLANIRSVLVACDTEFQLSKQVKNILVEYFANITESGISKQHFRYSLIGVGAYHQFFNAVSDNIYQVLSSSESGDVCLPAVNDPYCMAHMGEGHSVSFVVPEDGDLKGMIFCVVYLSTPKIIEPQFTTVVIVNYTKCTFHIHNHGTTISFKDGDWHGIMSNLECGDNVEIFVNFGNGLVVKNTTVYLIRGESENMEKASETKKHSLIRFIKKVVM* | 977 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g0902 | 976 | Pfam | TIR domain | 13 | 180 | IPR000157 | GO:0007165 | |
Vra9g0902 | 976 | ProSiteProfiles | TIR domain profile. | 12 | 179 | IPR000157 | GO:0007165 | |
Vra9g0902 | 976 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 4 | 156 | IPR035897 | - | |
Vra9g0902 | 976 | Gene3D | Ribonuclease Inhibitor | 518 | 698 | IPR032675 | - | |
Vra9g0902 | 976 | SUPERFAMILY | L domain-like | 532 | 718 | - | - | |
Vra9g0902 | 976 | Pfam | NB-ARC domain | 193 | 401 | IPR002182 | GO:0043531 | |
Vra9g0902 | 976 | Gene3D | - | 179 | 329 | IPR027417 | - | |
Vra9g0902 | 976 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 433 | IPR027417 | - | |
Vra9g0902 | 976 | SUPERFAMILY | "Winged helix" DNA-binding domain | 411 | 510 | IPR036390 | - | |
Vra9g0902 | 976 | Gene3D | - | 340 | 417 | IPR042197 | - | |
Vra9g0902 | 976 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 17 | 949 | IPR044974 | GO:0006952 | |
Vra9g0902 | 976 | PRINTS | Disease resistance protein signature | 210 | 225 | - | - | |
Vra9g0902 | 976 | PRINTS | Disease resistance protein signature | 285 | 299 | - | - | |
Vra9g0902 | 976 | PRINTS | Disease resistance protein signature | 375 | 389 | - | - | |
Vra9g0902 | 976 | PRINTS | Disease resistance protein signature | 632 | 648 | - | - | |
Vra9g0902 | 976 | SMART | till_3 | 13 | 153 | IPR000157 | GO:0007165 | |
Vra9g0902 | 976 | Gene3D | - | 11 | 178 | IPR035897 | - | |
Vra9g0902 | 976 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 17 | 949 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g0902 | Vra-Chr9 | 10778631 | 10782572 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g0902 | 14 | 672 | WRKY Transcription Factor Family | AT4G12020 | 27.514 | 2.63e-53 | 201 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g0902 | - | - | var:108346736 | 1473.37 |