Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0902 ATGGATATCGCCTCCTCATCATACAAACTCCCATGGAAGTACGATGTGCTGATCAACTTCACTGGAGAAGACATCCACAGAAAATTTGTTTCTCATCTCAATTCTGCCTTCTCTACTATTGGTCTCACCACTTTCCTTCATCACCCCAATGCAGTGAAGTCTACTCACATCCAACAACCTATTCTCAGCAACTGTCGAGTAGCAATTGTTGTTTTCACCCAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATCAAATGGCACGAAACTTATTGCCGACATGTTCTTCCCGTATATTATGAAATCCAGCCATCTGATGTACGTCTTCAAAAGGGTGACTTTGGAAAAGCCTTGAAGGCAACTGCTCAACAAACATTTTCAGGAGAAGAATTGGTGCATGGAATGTCCAGGTGGAGCCATGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATCACAGGAGTGATGCTGANTTAGTGGAGAAAATTGTTAAGAGCGTTGTTAATTTACCAATCTTGTCTGCTACTAAATTTCCAGTTAGATTACAATCATACGTGGAAGATCTGATTCAAACTATCAAAAATAAACAATCGGAAGTTTGTATCATAGGAATAGGTGGAGAGGAAGGATCTGGTAAAACCACTATTGCCAAAGCGATCTACAATCAAATTCATTGGACATTCAAGGAGAAAAGTTTCATTGAAAATATTTCACAAGTTAGCGGAATAAGAGGGCATCTTCGTTTACTAGAACAACTTCTTTTAGATGTCCTAAAACAAAAGGTGGAGATTCCTAGCATTGATGTGGGAAGAACTATAATTCGGGAAAAGCTTTCTGGGAAAAGGATGCTCATTGTACTTGACGATGTTTCCAACTTTAGTTTATTCGACATATGGGATTTTCGTAAATGGTCCGTTGAAGGAACTGTTATAATCCTTACATCAACATATATAGAACCGCTGAGAGGAGGTGATTCTGTCTTTTGGGTAAAGCGAATGAACGCAGAGGACTCCCTTGAGCTTCTTAGTTGGCACGCATTTAAAGAACCAAAACCAAAAGAAGAATACAAAGACCTTGCAAGAAGTGTAGTTAGATATTGTGCAGGACTACCACTAGCTCTTGAAGTCGTTGGAAGTGCTTTATTTGAAAAGACCAAAGAAGAATGGAACAATTTATTGTTTGCGATATATGGCATGCGTTGTGTTCCAAAGATAATAAAAATAAGCATCGAAGGTTCACTGAATGAAATGGAAAAAGATATATTCCTTGATATATGTTTTTTCTTTGTTGGTAAGAGCAGAGCCTATGTTAGGAAGATCCTAAATGGCTGTGGAGTAGACGCTGATATTGGAATAAGAGTTCTCATCCAGCGTAACCTCATCAAAATTAACAAGAACAACAAATTTGGAATGCATCATTTGCTACAAAACATCGGAATGAAAATTATTCATGAAAATTCAGGAAAGGATCTTGGGAAGAACAGACGACTGTGGTTTGATAAGGATACAAAATATGGGACAGAAGCCCTGCAGTGGTTGCCTGTGAAACTGCTCACTGCCATCGAAAGTCTACAACCGACTGCAATTTCTTATGACCTTCTTAATAAAATAAGATGGATCAGTTCGCATGGGCTTTCTTCAGAATATCTGCCTAACAACATTTATGAGGATGATGCAACAGCTATTGATTTAAAACGCAGTCTTCTTCGATTTCTCTGGAAAACACCCCAGGTTTTGAGAGCACTAAAAGTCCTTAACCTCAGTCACTACGAGCATTTAACTACAACCCCTGACTTTACCGGATTACCAAGTCTTGAACACCTCATTTTCAAATATTGTTCAAGATTGCGCGAAGTACACCGATCTATTGGATCACTCAACAGTCTTATACTCCTAAATTTGAAAGACTGTACAAGTCTAAACTATCTTCCAATAGAGATATATGACTTGAAATCATTAAGAACTTTCATTCTCTCTGGTTGTTCCAAGATTGACATAATGGATAAAGATATAGCAAAGTTGGAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTCAAACATGTGCCTTTTTCAATTGTAATCTCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAAGGATTATCTCATAATCTTTTTCCATCTATCATTCGGTCTTGGATGTCTCCAATAATGAATCCCATCTCTTATATTCATTCGTTTTGCATGGATACTGAGGATAATACGATTGATATTGCACCGTTGCTTAGCACCCTTGCAAATATTCGAAGTGTTTTGGTAGCATGTGACACCGAATTTCAGTTATCTAAGCAAGTGAAAAATATTTTGGTTGAATATTTTGCGAATATTACAGAATCAGGAATTTCAAAGCAGCACTTCAGGTATTCTTTGATTGGTGTTGGAGCATACCATCAATTCTTTAATGCTGTCAGCGATAACATATATCAGGTATTGTCAAGCAGTGAGTCTGGTGATGTTTGTCTCCCAGCTGTGAATGATCCTTATTGTATGGCCCATATGGGTGAGGGACACTCTGTTTCTTTCGTTGTGCCTGAAGATGGTGATTTGAAAGGAATGATTTTTTGTGTTGTTTATTTATCAACTCCTAAGATCATTGAACCTCAATTTACTACTGTCGTAATTGTTAATTACACAAAGTGCACATTCCATATACACAACCATGGCACAACAATTTCTTTTAAAGATGGAGATTGGCATGGCATAATGTCAAATTTAGAATGTGGAGACAATGTGGAGATATTTGTGAACTTTGGTAATGGATTGGTGGTCAAGAACACAACGGTGTATCTGATACGGGGTGAATCAGAGAACATGGAAAAAGCGTCTGAGACAAAAAAACATTCTCTCATTAGATTCATAAAGAAAGTTGTAATGTGA 2931 0.3767 MDIASSSYKLPWKYDVLINFTGEDIHRKFVSHLNSAFSTIGLTTFLHHPNAVKSTHIQQPILSNCRVAIVVFTQTYSQSAWCLHQLQQIIKWHETYCRHVLPVYYEIQPSDVRLQKGDFGKALKATAQQTFSGEELVHGMSRWSHALTKAANFFGWDESNHRSDAXLVEKIVKSVVNLPILSATKFPVRLQSYVEDLIQTIKNKQSEVCIIGIGGEEGSGKTTIAKAIYNQIHWTFKEKSFIENISQVSGIRGHLRLLEQLLLDVLKQKVEIPSIDVGRTIIREKLSGKRMLIVLDDVSNFSLFDIWDFRKWSVEGTVIILTSTYIEPLRGGDSVFWVKRMNAEDSLELLSWHAFKEPKPKEEYKDLARSVVRYCAGLPLALEVVGSALFEKTKEEWNNLLFAIYGMRCVPKIIKISIEGSLNEMEKDIFLDICFFFVGKSRAYVRKILNGCGVDADIGIRVLIQRNLIKINKNNKFGMHHLLQNIGMKIIHENSGKDLGKNRRLWFDKDTKYGTEALQWLPVKLLTAIESLQPTAISYDLLNKIRWISSHGLSSEYLPNNIYEDDATAIDLKRSLLRFLWKTPQVLRALKVLNLSHYEHLTTTPDFTGLPSLEHLIFKYCSRLREVHRSIGSLNSLILLNLKDCTSLNYLPIEIYDLKSLRTFILSGCSKIDIMDKDIAKLESLITLIAENTAVKHVPFSIVISKSIGYISLRGFEGLSHNLFPSIIRSWMSPIMNPISYIHSFCMDTEDNTIDIAPLLSTLANIRSVLVACDTEFQLSKQVKNILVEYFANITESGISKQHFRYSLIGVGAYHQFFNAVSDNIYQVLSSSESGDVCLPAVNDPYCMAHMGEGHSVSFVVPEDGDLKGMIFCVVYLSTPKIIEPQFTTVVIVNYTKCTFHIHNHGTTISFKDGDWHGIMSNLECGDNVEIFVNFGNGLVVKNTTVYLIRGESENMEKASETKKHSLIRFIKKVVM* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0902 976 Pfam TIR domain 13 180 IPR000157 GO:0007165
Vra9g0902 976 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Vra9g0902 976 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Vra9g0902 976 Gene3D Ribonuclease Inhibitor 518 698 IPR032675 -
Vra9g0902 976 SUPERFAMILY L domain-like 532 718 - -
Vra9g0902 976 Pfam NB-ARC domain 193 401 IPR002182 GO:0043531
Vra9g0902 976 Gene3D - 179 329 IPR027417 -
Vra9g0902 976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 433 IPR027417 -
Vra9g0902 976 SUPERFAMILY "Winged helix" DNA-binding domain 411 510 IPR036390 -
Vra9g0902 976 Gene3D - 340 417 IPR042197 -
Vra9g0902 976 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 949 IPR044974 GO:0006952
Vra9g0902 976 PRINTS Disease resistance protein signature 210 225 - -
Vra9g0902 976 PRINTS Disease resistance protein signature 285 299 - -
Vra9g0902 976 PRINTS Disease resistance protein signature 375 389 - -
Vra9g0902 976 PRINTS Disease resistance protein signature 632 648 - -
Vra9g0902 976 SMART till_3 13 153 IPR000157 GO:0007165
Vra9g0902 976 Gene3D - 11 178 IPR035897 -
Vra9g0902 976 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 949 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0902 Vra-Chr9 10778631 10782572 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0902 14 672 WRKY Transcription Factor Family AT4G12020 27.514 2.63e-53 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0902 - - var:108346736 1473.37