Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0900 ATGCGTCCTGTTCCAGAGATAATAAAAGTAAGCATAGTAAGTTCACTGAATGAAATGGAAAAAGATATATTCCTTGATATATGTTGTTTCTTTGTTGGTAAGAGCAGAGGCTATGTTAGGAAGATCCTAAATGGCTGTGGAGTAGACGCTGATATTGGAATAAGAGTTCTCATCCAATGTAACCTCATCAAAATTAACAAGAACTACAAATTTGGAATGCATCCTTTGCTACAAGAAATCGGAATAAAAATTATTCGTGAAAATTCAAGAAAGGATCTTGGGAAGAACAGGCGACTGTGGTTTGATAAGTATGCAAAATATGGGAAAGAAGCCCTGCAGCGGTTGCCTGTGAAACTGCCTTCAGTTTTCAATGCCTTCGTTAGAGCACAACCGATTGTTTTGAGATCGCTAAAAGTCCTTAACCTCAGTCACTCCAAGTATTTAACTACAACCCCTGACTTTACCGGATTACCAAGTCTTGAACACATCATTTTCAAATATTGTTCGAGATTGCGCAGAGTACACCACTCTATTGGATCACTCAACAGTCTTATACTCCTAAATTTGAAAGACTGTACAAGTCTATACAATCTTCCAACAGAGATATATAAGTTGAAATCATTAAGAACTTTCATTCTCTCTGGTTGTTCCAAGATTGACATAATGGATAAAGATGTAGCAAAGTTGGAATCCTTGATAACTCTAATTGCTGAAAATACAGCTGTGAAACTTGTTCCTCTTTCAATTGTAAGCTCGAAAAGCATTGGATATATATCCCTACGTGGATTTGAGGGATTATCTCATAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCCCCAATAATGAATCCCATTTCTTATATTCATTCGTTTTGCATGGATATTGAGGATAATACGATTGATATTGCACCATTGCTTAGCACCCTTGCAAATATGCGAAGTTTTTTGGTAGCATGTGACACCAAATTTCAATTATCTAAGCAACTGAAAAATATTTCGGATGAATATTTCGGGAATATTACAGAACTAGGAATTTCAAAGCAGCACTTCAGGTGTTCTTTGATTGGTGTTGGAGCATATTATCAATTCTTCAATGCTGTCAGAGATAACATATCCGAGGTATTGTCAAGCAGTGAGTCTGGTGATGTTTGTCTCCCAGCTGTCAATGATCCTTATTGTATGGCCCATATGGGTGAGAGACACTCTGTTTCTTTCGTTGTGCCTGAAGATGTGATATGA 1242 0.3704 MRPVPEIIKVSIVSSLNEMEKDIFLDICCFFVGKSRGYVRKILNGCGVDADIGIRVLIQCNLIKINKNYKFGMHPLLQEIGIKIIRENSRKDLGKNRRLWFDKYAKYGKEALQRLPVKLPSVFNAFVRAQPIVLRSLKVLNLSHSKYLTTTPDFTGLPSLEHIIFKYCSRLRRVHHSIGSLNSLILLNLKDCTSLYNLPTEIYKLKSLRTFILSGCSKIDIMDKDVAKLESLITLIAENTAVKLVPLSIVSSKSIGYISLRGFEGLSHNLFPSIIRSWMSPIMNPISYIHSFCMDIEDNTIDIAPLLSTLANMRSFLVACDTKFQLSKQLKNISDEYFGNITELGISKQHFRCSLIGVGAYYQFFNAVRDNISEVLSSSESGDVCLPAVNDPYCMAHMGERHSVSFVVPEDVI* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0900 413 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 134 411 - -
Vra9g0900 413 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 103 - -
Vra9g0900 413 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 134 411 IPR044974 GO:0006952
Vra9g0900 413 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 103 IPR044974 GO:0006952
Vra9g0900 413 Gene3D Ribonuclease Inhibitor 106 232 IPR032675 -
Vra9g0900 413 SUPERFAMILY "Winged helix" DNA-binding domain 4 89 IPR036390 -
Vra9g0900 413 SUPERFAMILY L domain-like 134 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0900 Vra-Chr9 10755746 10760128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0900 5 107 WRKY Transcription Factor Family AT5G45050 41.509 2.71e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0900 - - vra:106772917 547.354