Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0883 ATGAATCCTTCCTTCTTTCTTTGGCATGATGCTGAACTTGTAGACATAATTGTTAGCCGCGTCAAGACATTACTGGACTATAAAGACTTGTTTATTACCGAATATCCAGTTGGATTAGAGTCCCGCGTGGAAGACGTGATTAAATGTATTGAAAATGAATCCAGCAAAGTGTGTATGATAGGAATATGGGGAATTGGAGGATCAGGTAAAACAACCATAGCCAAAGCCATCTATAATCGAATTTATCGTCAATTCATTGGTAAGAGTTTTATTGAGTTTAATCGTTATCAAGGCCATGTTGCTTTGCAACAAAATCTTCTTTCTAATGTCCTAAAATCCAAGTTGAAGGTGGCAAGCGTTGAGATTGGAAGAACTATGGTCCAGAATGGATTTTCTCGAAAAAAGTTCCTCCTTGTGCTTGATGACGTGAATAGCTCTGGCCAATTTGAAAACCTATACGGGAGTTATAGATGGTTCGGTCAAGGCTCTGTGATAATAATTACAAGTAGAAATGTTAGCCTGCTGAACCGACTCGAAGTTAATTATGTTTATCAAACGCATCCTTTGAACGAAAATGAGTCACTTGAGCTTTTTAGTTGGCATGCCTTTAAAGAAGCAAAACCAAGAAAAGAATGGAGTTTACTCGCAAGAAACGTCGTTGTTTATTGTGGAGGACTACCGCTAACTCTTCAATTCCTTGGTTCTTATTTATATGATAGGACAATAGAAGTGTGGGAAAGTGTATTGTTGAAACTACAAAGAATTCCCCCGGATGAACTTCTGAGCGTATTAAAAATATGTTTTGAAGATTTACGTGATACGGAAAAGGATATATTTCTGGATGTATGTTGTTTCTTTGTTGGCAAAGAAAGAGACTATGTGACAGAGATATTAAATGACTGTGGACTACATGCTGATATTGGAATAACAGTTCTCATACAGCGTGGCCTCATAAAAGTTGAAAGGAACAACAAACTTCAAGTGCATCCTTTGTTACAACACATGGGAAGAGAAATTATTCGTCAAGAATGCCCAGAGAAACCGGGAAAAAGGAGTCGATTGTGGTTTCAGGATGACGTAAAAGATGTACTGATACATAATACTGGGACGGAAGCTATCAAGGGATTGTCCCTGAAACTGCATTCAACAAGCAGAGATTGCTTCAAAGCTCATTCTTTCAAGAAAATGAAGAGACTAAGACTGCTACAACTTGATCATGGACAACTTAGTGGAGACTATGGACACATTTCTGAACAACTGAGATGTATTTGTTGGCGGGGGTTTCCATATAAACACATTCCAAGCAACTTTCATTTGCAAAATGTAATTGCAATGGATTTAAAGCATAGTCATCTTCAACTCCTCTGGAAACAACCCCAGGTTTTGGAGCGGTTAAAATTCCTTAATCTTAGTCACTCCAAATACCTGATACAAACACCTGACTTTTCAGGACTACCAAGTCTTGAACAGCTCATTCTAAAAGATTGTCCAAGTTTGCTCAAGGTACACCAATCCATTGCTGATCTCTCCAATATAGTATTGATAAATTTGAAGGATTGCACAAGTCTAAGCTATCTCCCAAGAGAGATATATAAGTTGACATCTTTAAAAACTCTCATCCTATCTGGTTGTTCGAAGCTTAGGCCATTGGAAAAGATATAA 1662 0.3779 MNPSFFLWHDAELVDIIVSRVKTLLDYKDLFITEYPVGLESRVEDVIKCIENESSKVCMIGIWGIGGSGKTTIAKAIYNRIYRQFIGKSFIEFNRYQGHVALQQNLLSNVLKSKLKVASVEIGRTMVQNGFSRKKFLLVLDDVNSSGQFENLYGSYRWFGQGSVIIITSRNVSLLNRLEVNYVYQTHPLNENESLELFSWHAFKEAKPRKEWSLLARNVVVYCGGLPLTLQFLGSYLYDRTIEVWESVLLKLQRIPPDELLSVLKICFEDLRDTEKDIFLDVCCFFVGKERDYVTEILNDCGLHADIGITVLIQRGLIKVERNNKLQVHPLLQHMGREIIRQECPEKPGKRSRLWFQDDVKDVLIHNTGTEAIKGLSLKLHSTSRDCFKAHSFKKMKRLRLLQLDHGQLSGDYGHISEQLRCICWRGFPYKHIPSNFHLQNVIAMDLKHSHLQLLWKQPQVLERLKFLNLSHSKYLIQTPDFSGLPSLEQLILKDCPSLLKVHQSIADLSNIVLINLKDCTSLSYLPREIYKLTSLKTLILSGCSKLRPLEKI* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0883 553 Gene3D - 29 183 IPR027417 -
Vra9g0883 553 Gene3D - 188 272 IPR042197 -
Vra9g0883 553 SUPERFAMILY L domain-like 340 547 - -
Vra9g0883 553 Gene3D Ribonuclease Inhibitor 371 553 IPR032675 -
Vra9g0883 553 Pfam NB-ARC domain 40 254 IPR002182 GO:0043531
Vra9g0883 553 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 549 - -
Vra9g0883 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 281 IPR027417 -
Vra9g0883 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 549 IPR044974 GO:0006952
Vra9g0883 553 PRINTS Disease resistance protein signature 59 74 - -
Vra9g0883 553 PRINTS Disease resistance protein signature 130 144 - -
Vra9g0883 553 PRINTS Disease resistance protein signature 223 237 - -
Vra9g0883 553 PRINTS Disease resistance protein signature 531 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0883 Vra-Chr9 10442729 10444736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0883 10 553 WRKY Transcription Factor Family AT4G12020 32.743 6.40e-77 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0883 - - vra:111240495 1107.43