Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g0878 | ATGGAGTTTGCATCTTCATCCTTCTTAACATCAGAACCCCATTTCATACACGATGTGTTCATCAACTTTGGTGGAGAAGACATCGGTAGAAGATTTGTTTCTCATCTACACTCTGTCCTTTTACAAAATCAAGTCAAAACTTTTATTAGCCAGGAGAATCTGCATGAGGGAATGAAGCTGGAAGAGCACATGAGGGCAATAGGGCACACTAAGATTACAATAATCGTTTTCTCCAAATCATACGCTGAATCTATCTGGTGTCTTCTTGAGCTTGAAAAAATCATTGAATGCGACGAAACATTTGGCCAAATAGTTCTACCCTTATTTTACGAGATTGACCCATCGGATGTACGTCATCAGAAGGATGATTTTGGAAAAGCTTTGGAAGAAGCTGCACACAAAAGTTATTCAGGAGAACAACTGGAACATGCGTTGTCCAAGTGGAGCCGTGCACTCACCACAGCTGCACGAATCACCGGTTGGGATTTCAGAAATTTCAGACATGATGCTGAACTTGTGGAGCGAATTGTTAGCCACGTTAAGACATTACTGGACTATAAAGACTTGTCTATTACCCAATATCCTGTTGGATTAGAGTCCCAGGTGGAAGACGTGATTAAATGTATTGAAAATGAATCCAGCAAAGTGTGTATGATAGGAATATGGGGAATGGGAGGATCAGGTAGAACAACCCTAGCCAAAGCCATCTACAATCGAATTTATCGTGAATTCATTGGTAAGAGTTTTATTGAGAATATTGGTGAAGTTTGGGATTCAAAAATTGAAAGGTATGTTGCTTTGCAAGAAAATCTTCTTTCTGATGTCCTAAAATCCAAGTTGGAGGTGAAAAGCGTTGGGATAAGAAGAACTATGATCCAGAATGGAATTTCTCGGAAAAAGTTGCTCATTGTACTTGATGATGTCAATGAAATTGGCCAATTAAAAAGCCTATGTGGGAGTCGTGAATGGTTCGGTCAAGGAACTGTGATAATCCTTACTACTAGAGATAAACACTTGCTGAACCAACACTTAGTTGATTATGTTTATCAAATGGATCGTTTGAACGAAAATGAGTCACTTGAGCTTTTTAGTTGGCATGCATTTAGAGATGCAATACCAAAAAAAGAATGGAGTGAACTTGCAAGAAACGTCATTGTTTATTGTAGAGGACTACCACTAGCTCTTCAGTTCCTTGGTTCTTATTTATGTGATAAGACAATAGAAGTGTGGGAAAGTGTATTGAGAGAATTACAAAGAAATCCCCCGAATGAACTTCTGAACTTATTAAATATGAGTTTTGACGGTTTACGTGATACTGAAAAGGATATATTTCTTGATGTATGTTGTTTCTTTAAAGGCAAAGAAAAAGACTATGTGACAGAGATATTAAATGGGTGTGGACTACATGCTGATATTGGAATAACACTTCTCATAGATCGTGGCCTCATAAAAGTTGAAAGGAACAACAAACTTGAACTGCACCCTTTGTTACGAGACATGGGAAGACAAATTATTCATCAAGAATGCTCAAAGGAACCGGGGAAAAGAAGTCGATTGTGGTTGCAGGATGACGTAAAAGATGTATTGAACGAGAATACTGGGACAGAAGCTATCCAGGGATTGTCCTTGAAACTGCATTCAAGAAGAAGAGATGGCTTTGAAGCTCATGCTTTCAAGAAAATGAAGAGACTAAGATTGCTACAACTTGATCATGTACAACTTAGTGGAGATTTTGGGAACATTTCTGAAGAACTGAGATGGATTTGTTGGCGAGGGTTTCCATATGAACACATTCCAAGCAACTTTCATTTGCAAAATGCAATTGCAATAGATTTAAAGCACAGTCATCTTCAACTCCTCTGGAAACAACCCCCAGGTTTTAGAGCGGTTAAAATTCCTTAA | 1902 | 0.3838 | MEFASSSFLTSEPHFIHDVFINFGGEDIGRRFVSHLHSVLLQNQVKTFISQENLHEGMKLEEHMRAIGHTKITIIVFSKSYAESIWCLLELEKIIECDETFGQIVLPLFYEIDPSDVRHQKDDFGKALEEAAHKSYSGEQLEHALSKWSRALTTAARITGWDFRNFRHDAELVERIVSHVKTLLDYKDLSITQYPVGLESQVEDVIKCIENESSKVCMIGIWGMGGSGRTTLAKAIYNRIYREFIGKSFIENIGEVWDSKIERYVALQENLLSDVLKSKLEVKSVGIRRTMIQNGISRKKLLIVLDDVNEIGQLKSLCGSREWFGQGTVIILTTRDKHLLNQHLVDYVYQMDRLNENESLELFSWHAFRDAIPKKEWSELARNVIVYCRGLPLALQFLGSYLCDKTIEVWESVLRELQRNPPNELLNLLNMSFDGLRDTEKDIFLDVCCFFKGKEKDYVTEILNGCGLHADIGITLLIDRGLIKVERNNKLELHPLLRDMGRQIIHQECSKEPGKRSRLWLQDDVKDVLNENTGTEAIQGLSLKLHSRRRDGFEAHAFKKMKRLRLLQLDHVQLSGDFGNISEELRWICWRGFPYEHIPSNFHLQNAIAIDLKHSHLQLLWKQPPGFRAVKIP* | 634 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g0878 | 633 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 11 | 161 | IPR035897 | - | |
Vra9g0878 | 633 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 20 | 619 | IPR044974 | GO:0006952 | |
Vra9g0878 | 633 | PRINTS | Disease resistance protein signature | 218 | 233 | - | - | |
Vra9g0878 | 633 | PRINTS | Disease resistance protein signature | 295 | 309 | - | - | |
Vra9g0878 | 633 | PRINTS | Disease resistance protein signature | 388 | 402 | - | - | |
Vra9g0878 | 633 | PRINTS | Disease resistance protein signature | 559 | 575 | - | - | |
Vra9g0878 | 633 | Gene3D | - | 353 | 437 | IPR042197 | - | |
Vra9g0878 | 633 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 20 | 619 | - | - | |
Vra9g0878 | 633 | ProSiteProfiles | TIR domain profile. | 15 | 184 | IPR000157 | GO:0007165 | |
Vra9g0878 | 633 | Pfam | TIR domain | 17 | 183 | IPR000157 | GO:0007165 | |
Vra9g0878 | 633 | Gene3D | - | 184 | 347 | IPR027417 | - | |
Vra9g0878 | 633 | Gene3D | - | 10 | 183 | IPR035897 | - | |
Vra9g0878 | 633 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 189 | 446 | IPR027417 | - | |
Vra9g0878 | 633 | Pfam | NB-ARC domain | 199 | 421 | IPR002182 | GO:0043531 | |
Vra9g0878 | 633 | SUPERFAMILY | "Winged helix" DNA-binding domain | 424 | 529 | IPR036390 | - | |
Vra9g0878 | 633 | SMART | till_3 | 16 | 158 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g0878 | Vra-Chr9 | 10396506 | 10398771 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g0878 | 17 | 622 | WRKY Transcription Factor Family | AT4G12020 | 28.201 | 1.11e-74 | 259 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g0878 | - | - | vun:114165946 | 942.569 |