Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0876 ATGATAGGAATATGGGGAATGGGAGGATCAGGTAAAACAACCATAGTCAAAGCCATCTACAATCGAATTTATCGTCAATTCATTGGAAAGAGTTTTATTGAGAATATTCGTCATGAAGGGTATATTGCTTTGCAAGAAAATCTTCTTTCTGATGTCCTCAAATCCAAGTTCAAGGTGAAAAGCGTTGGGATGGGAAGAACTATGATCCAGAATAGATTTTCGCGAAAAAAGTTGCTCATTGTGCTTGATGATGTGAATGAGTTTGCCAAATTAGAAAACCTATGCGGGAGTCGTGAATGGTTCGGTCAAGGAACTGTGATAATCATTACTACTAGAGATTTTCAGTTGTTGAAACAACTCAGAGTTAATTATGTTTATAAAATGCATCTTTTGAACGAAAATGAGTCACTTGAGCTTTTTAGTTGGCATGCATTTAGAGATGCAATACCTAAAAAAGAATGGAGTGAACTCGCAAGAAACGTCGTTGTTTATTGTGGAGGACTACCGCTAGCTCTTGAGTTCCTTGGTTCCTATTTATGTGATAAGACAATTGAAGTGTGGAAAAGTGTATTATTGAAACTACAAAGAATTCCCCCGGATGAACTTCTGAGTGTATTAAAAATAAGTTTTGAAGATTTACATGATGCGGAAAAGAATATATTTCTGGATGTATGTTGTTTCTTTATTGGCAAAGAAAGAGAGTATGTGACAGAGATATTAAATGGGTGTGGACTAAATGCTGATATTGGAATAACAGTTCTCATAGAGCGTGGCCTCATAAAAGTTGAAAGGAACAACAAACTTCAAATGCATCCTTTGTTACAAGAGATGGGAAGAGAAATTATTCGTCAAGAATGCCCAGAGAAACCGGGAAAAAGGAGTCGATTGTGGTTTCAGGATGACGTAGAAGATGTACTGAAAGAGAATACTGGGACAGAAGCTATATTGTCCCTGAAATCTGATTCCAGCATTGGAGATTGCTTGGAATCTCGTGCTTTCAAGGAAATGAAGAGACTAAGACTGCTACAACTTGATCATGTACAGCTTAGTGGAGATTTAGGGCACATTTCTAAACAACTAAGATGGATTTGTTGGCGAGGGTTTCGTTATAGATACATTCCAAAGAACTTTCATTTGGAAAATGTAATTGCAATTGATTTAAAACGTAGTCTTCTCCATCTGGTCTGGCAAGGACGCGTGGTTTTAGAGCGGTTAAAATTCCTTAATCTCAGTCACTCCAAGTACTTGAAAGAAACACCTGACTTTTCAGGACTACCAAGTCTTGAACAACTCATTCTAAAAGATTGTGCAAGATTGCGCAAGGTACACCCATCCATTGGTGTTCTGTCCAACATACGAGTAATAAATTTGGAGGACTGCACAAGTCTAAGATATCTCCCAAGAGAGATATATAAGTTGAGATCTTTAAAAACTCTCATCCTCTCTGGTTGTTCGAATCTTAGGTCACGGGAAAAGATATAA 1482 0.3745 MIGIWGMGGSGKTTIVKAIYNRIYRQFIGKSFIENIRHEGYIALQENLLSDVLKSKFKVKSVGMGRTMIQNRFSRKKLLIVLDDVNEFAKLENLCGSREWFGQGTVIIITTRDFQLLKQLRVNYVYKMHLLNENESLELFSWHAFRDAIPKKEWSELARNVVVYCGGLPLALEFLGSYLCDKTIEVWKSVLLKLQRIPPDELLSVLKISFEDLHDAEKNIFLDVCCFFIGKEREYVTEILNGCGLNADIGITVLIERGLIKVERNNKLQMHPLLQEMGREIIRQECPEKPGKRSRLWFQDDVEDVLKENTGTEAILSLKSDSSIGDCLESRAFKEMKRLRLLQLDHVQLSGDLGHISKQLRWICWRGFRYRYIPKNFHLENVIAIDLKRSLLHLVWQGRVVLERLKFLNLSHSKYLKETPDFSGLPSLEQLILKDCARLRKVHPSIGVLSNIRVINLEDCTSLRYLPREIYKLRSLKTLILSGCSNLRSREKI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0876 493 Gene3D - 130 214 IPR042197 -
Vra9g0876 493 Gene3D Ribonuclease Inhibitor 312 492 IPR032675 -
Vra9g0876 493 Gene3D - 1 125 IPR027417 -
Vra9g0876 493 PRINTS Disease resistance protein signature 1 15 - -
Vra9g0876 493 PRINTS Disease resistance protein signature 72 86 - -
Vra9g0876 493 PRINTS Disease resistance protein signature 165 179 - -
Vra9g0876 493 PRINTS Disease resistance protein signature 471 487 - -
Vra9g0876 493 Pfam NB-ARC domain 2 196 IPR002182 GO:0043531
Vra9g0876 493 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 489 - -
Vra9g0876 493 SUPERFAMILY L domain-like 282 487 - -
Vra9g0876 493 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 489 IPR044974 GO:0006952
Vra9g0876 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0876 Vra-Chr9 10355649 10357806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0876 416 489 WRKY Transcription Factor Family AT5G45050 40.541 5.36e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0876 - - vra:106774163 984.941