Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0863 ATGGATTTGGAAGCTGTGGCAGAAACAGTTGAAAATTCTAATGATCAAATATCAGCAGCATTTGAAAGCAGTTCTATTGGGGAGCCAAATGTTGGTATGGAATTTGAGTCAGAGGAAGCTGCTAAGAACTTTTATGAGAAATATGCAAAGCATGAAGGGTTTGTTGTTCGCCTTGATCGCTGCCATCGTTCTGAGGTTGACAACCGAATCATTTCACGCCGTTTTTCATGCAATAAGCAAGGTTTTCATGTGAGGGTTAGAAATAAAACCAAGCCTGTTCATAAACCAAGGACTAGCATAAGAGAAGGTTGTGAAGCCATGATGTTGGTTAAAGTTAAATGTGGGAAGTGGGTGGTTACTAAATTTGTGAAGGAGCACAGTCATCTACTAAATGCTTCTGGTTCTCCTTCATATAGTAAAATGATTGAGTCAAAGGATAGGATAATTCAACAACTCACAAAGGAACTTGAGTACCGAGATCGATTATGTCAGCAATATCGCAGACAGCTATTCTCCCTTCTGGAGACTGTTGAGGAACAAACAGAAAGTTTATCAAAAAATGTTGAGCTTGTTGTTAACAATATAAGAAATCTTTAG 597 0.3836 MDLEAVAETVENSNDQISAAFESSSIGEPNVGMEFESEEAAKNFYEKYAKHEGFVVRLDRCHRSEVDNRIISRRFSCNKQGFHVRVRNKTKPVHKPRTSIREGCEAMMLVKVKCGKWVVTKFVKEHSHLLNASGSPSYSKMIESKDRIIQQLTKELEYRDRLCQQYRRQLFSLLETVEEQTESLSKNVELVVNNIRNL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0863 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 198 - -
Vra9g0863 198 Pfam FAR1 DNA-binding domain 43 131 IPR004330 -
Vra9g0863 198 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 2 198 - -
Vra9g0863 198 Coils Coil 174 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0863 Vra-Chr9 10188091 10191162 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra9g0863 FAR1 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0863 - - var:108347130 385.571