Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0843 ATGGTGCTGTATAGCCGGATTTTCAGTTACCATGTTGTTAGTTTCTTGTTGCTGGTTAGTTGTGGCATGAACTATGGAACTGATACTGATATCTTCTGCTTAAAAACTATAAAAGATACCCTTGAAGACCCCAATAACTATTTGAAGTTTTCTTGGGATTTCAACAACAAAACTGAAGGGTTCATATGTAGGTTTATTGGGGTTGAGTGTTGGCACCCTGATGAGAACAAGGTCTTGAATCTCAAACTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAATTGCTCTAGCTTAACTGGGTTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGATATATCTACTCTTGTACCATATGTGACCTCTCTTGACCTTTCTTCAAATGAATTTTCTGGGGCAATTCCGGTGACTCTTTCAAATTGCACCTTTCTCAATAGCCTCAGACTTGATCAGAACAGACTCACTGGTCAAATTCCTCTACAATTTGGTATTCTCTCACGGCTCAAGACCTTTTCTGTGTCTAACAATCTTTTGACGGGGCAAGTTCCAAGCTTTAGCTCTGCAGTTTCAGTGAATTATGCAAATAATCAAGGCCTGTGTGGAGGTAATGGATTGGGGTCTTGCCAAGCCAAGAATTCTAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCAGGTGGGGTGACTCTGGCAGCATTAGGATTGGCTGTTGGAATGTTCTTCTTCGTGCGACGTGTTTCTTTCAAGAAGAAGGAAGAGGACCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACAAATTAAGGTTTCTATGTTTGAGAAATCAATCTCAAAAATGAAGTTGATTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGTCAGGAAGAACAGGAACTGTTTACAAAGCTGTGCTTGGTGATGGAACAACACTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAGGAATTCATGTCTGAGATGGGTACACTAGGGACTGTCAAACATCGCAATCTTGTTCCTCTTTTAGGCTTTTGCATGGCCAAAAAAGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAATCTCCATGACCAACTCCATCCTGCAGATGGTGTGAGCACCCTTGACTGGACTACAAGACTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAACCCCCGAATCATCCACCGAAACATAAGCTCAAAGTGCATCTTGTTGGACGCAGAATTTGAGCCAAAAATTTCTGATTTCGGCCTTGCCAGACTGATGAACCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTGGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCCAAGGGGGATGTTTATAGCTTTGGGACTGTTCTTCTTGAGTTGGTGACTGGTGAAAGACCCACCAATGTGGCTAAAGCTCCAGAAACTTTTAAAGGAAATCTGGTAGAATGGATCACAGAGCTAACAAACAATGGAAAACTCCATGATGCCATTGATGAATCATTAGTCAGCAAGGATGTTGACAGTGAGCTTTTCCAATTTCTGAAGATTGCATGCAACTGTGTTCTGCCAACTCCAAAGGAGAGGCCAACCATGTTTGAAGTGTATCAGTTTTTAAGAGCCATTGGGGCTAGATACAATTTCACAACAGATGATGAGATATTGGTACCTACTGATAATGGTGATGCTGATAACATGGAGGAACTCATTGTAGCTCGGGAATGA 1833 0.4157 MVLYSRIFSYHVVSFLLLVSCGMNYGTDTDIFCLKTIKDTLEDPNNYLKFSWDFNNKTEGFICRFIGVECWHPDENKVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGTIPGDISTLVPYVTSLDLSSNEFSGAIPVTLSNCTFLNSLRLDQNRLTGQIPLQFGILSRLKTFSVSNNLLTGQVPSFSSAVSVNYANNQGLCGGNGLGSCQAKNSKSNMAVIAGAAAGGVTLAALGLAVGMFFFVRRVSFKKKEEDPEGNKWARSLKGTKQIKVSMFEKSISKMKLIDLMKATNNFSNTNIIGSGRTGTVYKAVLGDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMAKKERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWITELTNNGKLHDAIDESLVSKDVDSELFQFLKIACNCVLPTPKERPTMFEVYQFLRAIGARYNFTTDDEILVPTDNGDADNMEELIVARE* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0843 610 Pfam Protein tyrosine and serine/threonine kinase 304 575 IPR001245 GO:0004672|GO:0006468
Vra9g0843 610 Gene3D Transferase(Phosphotransferase) domain 1 376 592 - -
Vra9g0843 610 SUPERFAMILY Protein kinase-like (PK-like) 278 575 IPR011009 -
Vra9g0843 610 Gene3D Ribonuclease Inhibitor 28 217 IPR032675 -
Vra9g0843 610 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Vra9g0843 610 SUPERFAMILY L domain-like 32 195 - -
Vra9g0843 610 ProSiteProfiles Protein kinase domain profile. 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra9g0843 610 PANTHER RECEPTOR-LIKE PROTEIN 55 9 589 - -
Vra9g0843 610 PANTHER LRR RECEPTOR-LIKE KINASE 9 589 - -
Vra9g0843 610 CDD STKc_IRAK 307 575 - -
Vra9g0843 610 Gene3D Phosphorylase Kinase; domain 1 262 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0843 Vra-Chr9 9879172 9883036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0843 13 589 Receptor kinase-like Gene Family AT3G28450 47.189 3.29e-180 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Vra9g0843 PK_Tyr_Ser-Thr 5.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0843 - - gmx:100305365 974.541