Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0830 ATGGTCATTCTTAAGATAATTAAGCATTGTAAGGACCATTCGCCTTCTTTAGTCATTAGGCAACTTCTTGGGTTGGATGTTGGCAGTGTTCTTGAAGTTACCAACTGTTTCCCCTTTCCAATGAGGGAGGAGGATGAGGAAATTGAAGCTGATGATGCTAATTACCAGCTGGAAATGATTAGATTCCTGAGGGAGGTTAATGTTGACAACAATATTGTTGGATGGTACCAATCTACATTGCTCGGCTCAGGTGGAGGACAATCTTGA 267 0.4157 MVILKIIKHCKDHSPSLVIRQLLGLDVGSVLEVTNCFPFPMREEDEEIEADDANYQLEMIRFLREVNVDNNIVGWYQSTLLGSGGGQS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0830 88 ProSiteProfiles MPN domain profile. 1 88 IPR037518 -
Vra9g0830 88 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 2 79 IPR000555 GO:0005515|GO:0008233|GO:0008237
Vra9g0830 88 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 2 83 - -
Vra9g0830 88 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 2 83 - -
Vra9g0830 88 Gene3D Cytidine Deaminase, domain 2 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0830 Vra-Chr9 9744241 9745984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0830 59 83 Eukaryotic Initiation Factors Gene Family AT1G10840 84.000 1.13e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0830 K03247 - vra:111242573 153.68