Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra9g0830 | ATGGTCATTCTTAAGATAATTAAGCATTGTAAGGACCATTCGCCTTCTTTAGTCATTAGGCAACTTCTTGGGTTGGATGTTGGCAGTGTTCTTGAAGTTACCAACTGTTTCCCCTTTCCAATGAGGGAGGAGGATGAGGAAATTGAAGCTGATGATGCTAATTACCAGCTGGAAATGATTAGATTCCTGAGGGAGGTTAATGTTGACAACAATATTGTTGGATGGTACCAATCTACATTGCTCGGCTCAGGTGGAGGACAATCTTGA | 267 | 0.4157 | MVILKIIKHCKDHSPSLVIRQLLGLDVGSVLEVTNCFPFPMREEDEEIEADDANYQLEMIRFLREVNVDNNIVGWYQSTLLGSGGGQS* | 89 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra9g0830 | 88 | ProSiteProfiles | MPN domain profile. | 1 | 88 | IPR037518 | - | |
Vra9g0830 | 88 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 2 | 79 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Vra9g0830 | 88 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H | 2 | 83 | - | - | |
Vra9g0830 | 88 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED | 2 | 83 | - | - | |
Vra9g0830 | 88 | Gene3D | Cytidine Deaminase, domain 2 | 1 | 85 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra9g0830 | Vra-Chr9 | 9744241 | 9745984 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra9g0830 | 59 | 83 | Eukaryotic Initiation Factors Gene Family | AT1G10840 | 84.000 | 1.13e-08 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra9g0830 | K03247 | - | vra:111242573 | 153.68 |