Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0822 ATGGGTGGGATGGGTAAGACCACACTTACTCAACATGTATACAATGATCCAAAGACAGACGAAGCTAAATTTGATGAAAAGGCTTGGGTTTGCGTTTCTGATGCATTTGATGCCTTGAGAGTATCCAAAGCAATTATTGGAGCTTTCACTAACTCAAGAGATGACAGTGGCGACCTAGAAATGATTCATGGAAAATTGAAAAAAAGGTTGTCCGGAAGGAAGTTTCTTCTGGTTCTGGATGATGTTTGGAACGAAGACCGAAATCAATGGAAAGCATTACAAACTCCTCTTACNTTTGGAGCTAAAGGAAGTAAAATTATAGTCACAACACGCAGTCACAAAGTTGCTTCTATCATGCAGTCAACCTACATACACCAACTAAAGCAATTAGATGAAGATCACAGCTGGCAAACTTTTGCTAAACACGCATTCCAAGATGAAAAGTTGAAGTCTGAGTTAAAGGAGATTGGTACGAAGATAGTTAAAAAGTGCCAAGGATTGCCTCTTGCCCTTGAAACAATAGGATGTCTTTTACAGTCAAAGTCATCTGTTTCAGAATGGGAAGGTGTATTGAAAAGCGAGATATGGGACTTACCAATAGAAGATAGTAAAATCGTCCCTACTTTGTTGTTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCATTATTCCCCAAAGACCATAGGTTTGACAAGGAGAGCTTAATTTTGTTATGGATGGCTCAAAATTTTGTACATTGCTCTCAACAAAGCAAGCCTCCNGAAGAAGTAGGTGAAAACTACTTCAATGATCTNGTATCAAGGTCATTCTTTAAACAAATAACTTGGTACAACGAAACATATTTTGTTATGCACGACCTTCTCAATGATTTAGCAAAATATGTTTCAGGTGAAATCTGCTACAGGTTAGGTGTTGATGGTGAAAAAATAGTATCAAGGAAAACCCGTCACATATACGTAAGCTGTCCAATTCAATATTATACGACTTTATGTGATGCTAAAGGGTTACGGACATTTATAGCAATTCAGAAGCGTTGTAAGATGCCAATAGAAGAGTTAATCTCCAACTTTAAGTTTTTACGGGTCTTATCAATGCGTTGGTGTATTAAGGTGCCTGGCACTATAGGCAATCTTATACATCTCCGTTCGTTAGACCTTTTGGGTACCGACATAGAGAGACTTCCTGACTCAATCTGTTCACTCTATAACTTGCAAGAATTGAAACTAAACAATTGTGTCAAATTGAAGGAGTTGCCTTTGACTTTGCATGGGCTCACCAATTTGCGCCGCCTTGAACTTATCGGAACTACTTTAACAATGGTTCCACACCGTTTAGGAAAGTTGAAGAATCTTCAGGTGTGGATGGACAATTTTGAGGTTGGCAAAAGTAGTGAGTTCAGTATTCAACAATTAGGAGAACTTGATCTTCATGCAGAGTAGTTCTCAATTAAAAATCTTGAAAATATCTCAAATCCCTATGAGATGAATTTGAAGAATAAAACACGTATTATGAGCTTGAGATTACAATGGAATTTAGAGCGGAACGATGACGATTCAATAAAAGAAAGAGAAGTACTTGAGAATCTGCAACCTTCCAGACATTTGAAGCACTTGTCAATAGATGGCTATGGTGGCACACAATTTCCCCGTTGGTTATCCAATAATTCTTTATCGAATTTGGTGTCCTTAACCTTGAAAAATTGTAAATATTGCTTATGGTTGCCTTCCCTTGGACTTTTGACATTTCTGGAGGAGTTGAGAATTGATGGCCTTGATTGGATAGGAAGGATATATGCTGATTTCTACGGGAATAGCTCTTCTGCATTTGCATCGTTGAAAACGTTGAGCTTTAAAGATATGAAGGAATGGGAAGAATGGCAGTTCATGACCGGTGCTTTTCCAAGTCTTCAAAGTCTTTTTCTGACGAATTGTCCCAAGCTAAAAGAATTGCCAAACATACTTTGTCATTTAAAGAGACTATTTATAAATAACTGCCGCCAACTTGGGGCTCCGATTCCTGTGGCCGGAGAGATTCCCAGGCAGGTTATTTATTTTGGTCCAGGCATCAGTATTCCCATTAGCCATTGGTACCATTCCCTTGTTGAATTGGATATCGGACATGGTTGTGACTCTCTCACTACCTTTCCTCTAGATTTGTTCCCAAAACTCGGCGAGCTTTCTTTAATACACTGTTACAATCTACGGATAATATCGCAGGAGCACCCTCATAATCATTTGAAGTATTTGATGATTCGACATTGCCCTGAATTTGAATCATTTCCCAATGAAGGATTATTTGTACCTCAGCTAGNGNCATTNNNTATTANNGGATTNGAGAAATTGAAGTCAATGCCTAAATGCATGTCTGCCCTTCTTCCATCTCTTAATTGTCTGTACATACGCAATTGTCCAGCGCTGGAGTTGTCCGAAGAATGTTTGCCATCAAATGTAAAACTCTTGTATCTCGTGAATTGCTCCAAACTTGTGGCCTCCCTAAAGGGCGCTTGGGGAATCAACCCTTCCTTAAAAGACTTACATATTAGCAAAGTGGATTTGGAGTGTTTTCCGGGTAAAGGTTTGCTCCCACTTTCTCTTGTTAAACTAGAGATAGATAATTATCCAAATCTTAAGAAACTGGACTACAGGGGTCTCTGTCACCTCTCCTCTCTTCAGATATTGACTCTTTATAACTGTCCTAGACTCCAATGCTTGCCAGAGGAGGGTCTGCCCAAATCCATTTCAACACTCGAAATTGAAGATTGTCCGTTACTCAAACAGCGGTGCAAGAAAGAAGGTAAAGACTGGGAAAAGATTGCTCACATTAAATCCATATGCGTTGATTAA 2862 0.3889 MGGMGKTTLTQHVYNDPKTDEAKFDEKAWVCVSDAFDALRVSKAIIGAFTNSRDDSGDLEMIHGKLKKRLSGRKFLLVLDDVWNEDRNQWKALQTPLTFGAKGSKIIVTTRSHKVASIMQSTYIHQLKQLDEDHSWQTFAKHAFQDEKLKSELKEIGTKIVKKCQGLPLALETIGCLLQSKSSVSEWEGVLKSEIWDLPIEDSKIVPTLLLSYYHLPSHLKRCFAYCALFPKDHRFDKESLILLWMAQNFVHCSQQSKPPEEVGENYFNDLVSRSFFKQITWYNETYFVMHDLLNDLAKYVSGEICYRLGVDGEKIVSRKTRHIYVSCPIQYYTTLCDAKGLRTFIAIQKRCKMPIEELISNFKFLRVLSMRWCIKVPGTIGNLIHLRSLDLLGTDIERLPDSICSLYNLQELKLNNCVKLKELPLTLHGLTNLRRLELIGTTLTMVPHRLGKLKNLQVWMDNFEVGKSSEFSIQQLGELDLHAE*FSIKNLENISNPYEMNLKNKTRIMSLRLQWNLERNDDDSIKEREVLENLQPSRHLKHLSIDGYGGTQFPRWLSNNSLSNLVSLTLKNCKYCLWLPSLGLLTFLEELRIDGLDWIGRIYADFYGNSSSAFASLKTLSFKDMKEWEEWQFMTGAFPSLQSLFLTNCPKLKELPNILCHLKRLFINNCRQLGAPIPVAGEIPRQVIYFGPGISIPISHWYHSLVELDIGHGCDSLTTFPLDLFPKLGELSLIHCYNLRIISQEHPHNHLKYLMIRHCPEFESFPNEGLFVPQLXXXXIXGXEKLKSMPKCMSALLPSLNCLYIRNCPALELSEECLPSNVKLLYLVNCSKLVASLKGAWGINPSLKDLHISKVDLECFPGKGLLPLSLVKLEIDNYPNLKKLDYRGLCHLSSLQILTLYNCPRLQCLPEEGLPKSISTLEIEDCPLLKQRCKKEGKDWEKIAHIKSICVD* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0822 952 Gene3D - 129 212 IPR042197 -
Vra9g0822 952 Gene3D Ribonuclease Inhibitor 692 950 IPR032675 -
Vra9g0822 952 SUPERFAMILY L domain-like 289 672 - -
Vra9g0822 952 PANTHER DISEASE RESISTANCE PROTEIN RP 1 765 IPR044974 GO:0006952
Vra9g0822 952 PANTHER OS05G0414200 PROTEIN 1 765 - -
Vra9g0822 952 Pfam NB-ARC domain 1 192 IPR002182 GO:0043531
Vra9g0822 952 PRINTS Disease resistance protein signature 69 83 - -
Vra9g0822 952 PRINTS Disease resistance protein signature 560 576 - -
Vra9g0822 952 PRINTS Disease resistance protein signature 164 178 - -
Vra9g0822 952 Gene3D - 1 125 IPR027417 -
Vra9g0822 952 Gene3D Ribonuclease Inhibitor 469 673 IPR032675 -
Vra9g0822 952 Gene3D Ribonuclease Inhibitor 350 461 IPR032675 -
Vra9g0822 952 SUPERFAMILY L domain-like 702 944 - -
Vra9g0822 952 Gene3D - 213 300 IPR036388 -
Vra9g0822 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 227 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0822 Vra-Chr9 9603306 9669717 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0822 1 188 WRKY Transcription Factor Family AT5G45050 26.733 3.03e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0822 - - vun:114168932 1283.09