Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0803 ATGGTAGGAGAATCAAGAAAATGGGTGATTCTTTGTGCGTCGATATGGTTGCAGGCATTCACCGGGACGAACTTCGATTTCTCATCGTACTCTTCGGATTTGAAATCTGTGCTTGAGATAACTCAGCTTCAGCTGAACTATCTCTCTGTGGCCTCAGACATGGGAAAAGCCTTTGGGTGGTGCTCTGGTCTCTCTCTCCTTCATTTTCCTTTCTGGGTCGTTCTCTTCATCGCTGCTTTCATGGGACTCTTCGGCTATGGCTTCCAATGGCTTCTCATTCATCGCTTCATCACTTTGCCTTATTCTCTTGTTTTCTTTCTGTGTCTGATTGCTGGCTGCAGCATCTCCTGGTTCAACACCATCTGCTATGTCCTATGCATCAGACATTTTCCTTCAAACCGTTCACTTGCATTATCCCTGAGTGTTAGTTTCAATGGTGTGAGTGCAGCTTTGTACACGCTCATTGCCAATGCAATAAACTCAAACGATGACACTCTCTACCTATTACTCAATGCAATACTTCCAGTGCTGATATCTCTTCTAGTACTCATCCCAATTCTCCATCAACCAAAGCCTCAACCACATTCTGTTGACACCATTAAGCATGATTCATCAATCTTCCTGTGCCTCAACATCCTTGCCCTTGTAACTGGCCTCTACCTCATCTTCCTATATTCCTTCTCTTACACACTTGCCACTGCTCGTGTTATCCTTCTAGATGATAAAGAGGTGTACCAAGAACTCATTAACATCGAGGACAGCGCGAGGAGTAAAAGTACACAAAGCACAGTAGAGAAGAAAAGTCTCTTGGAGAGAGAGCAGCTTGCAATGCTGGGGGAAGAGCATTCAATTAAGTTGCTGGTACGTAGATGGGAATTCTGGTTGTACTACATAGCATATTTCTGTGGAGGAACAATTGGTTTGTCTTACAGCAACAACTTGGGCCAAATTTCCCAATCACTAGGACACTATTCCCACACTTCTTCTCTTGTCACACTCTACTCCACATGTTCCTTCTTTGGTCGCCTTCTTGCAGCTGCACCAGACTTCTTAAACAACAGGAGAATGCACTTTGCAAGAACAGGGTGGTTTGCAGCAGCCTTGGTGCCAACACCAATTGCATTCATTTTGTTGGTCATATCTGGTAGTGGAGCAGCATTGCACATAGGCACTGCCTTGATAGGGTTGAGTTCAGGCTTTGTGTTTTCTGCAGCAGTGTCTATTACCTCAGAGCTATTTGGTCCAAACAACGTTGGAGTGAACCACAACATCCTCATCACCAACATTCCTTTAGGTTCATGTCTCTATGGCCTTCTTGCAGCTTTGGTTTATGATTCCAATGCAATTAACTCAACCCATGAAATTTGGCTGCAAGAAATGTCCATGTGCATTGGGAGAAAGTGCTACCTGCAAACATTCATTTGGTGGAGCTGCATTTCAATGCTGGGCTTGGTTTCAAGTTTCTTGTTCTTCTTAAGGACTAAACAAGCTTATGACAATTTTGAAAAGAATGATAACAGAAACAACATAGCTACGGGATAA 1542 0.4364 MVGESRKWVILCASIWLQAFTGTNFDFSSYSSDLKSVLEITQLQLNYLSVASDMGKAFGWCSGLSLLHFPFWVVLFIAAFMGLFGYGFQWLLIHRFITLPYSLVFFLCLIAGCSISWFNTICYVLCIRHFPSNRSLALSLSVSFNGVSAALYTLIANAINSNDDTLYLLLNAILPVLISLLVLIPILHQPKPQPHSVDTIKHDSSIFLCLNILALVTGLYLIFLYSFSYTLATARVILLDDKEVYQELINIEDSARSKSTQSTVEKKSLLEREQLAMLGEEHSIKLLVRRWEFWLYYIAYFCGGTIGLSYSNNLGQISQSLGHYSHTSSLVTLYSTCSFFGRLLAAAPDFLNNRRMHFARTGWFAAALVPTPIAFILLVISGSGAALHIGTALIGLSSGFVFSAAVSITSELFGPNNVGVNHNILITNIPLGSCLYGLLAALVYDSNAINSTHEIWLQEMSMCIGRKCYLQTFIWWSCISMLGLVSSFLFFLRTKQAYDNFEKNDNRNNIATG* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0803 513 Pfam Nodulin-like 7 225 IPR010658 -
Vra9g0803 513 Gene3D MFS general substrate transporter like domains 4 487 IPR036259 -
Vra9g0803 513 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 240 506 - -
Vra9g0803 513 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 239 - -
Vra9g0803 513 Pfam PUCC protein 324 420 IPR004896 -
Vra9g0803 513 PANTHER NODULIN-LIKE/MFS TRANSPORTER 240 506 - -
Vra9g0803 513 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 239 - -
Vra9g0803 513 SUPERFAMILY MFS general substrate transporter 38 496 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0803 Vra-Chr9 9391044 9395063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0803 1 505 Nodulin-like Gene Family AT1G31470 54.089 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0803 - - gmx:100804951 851.662