Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0781 ATGGCATCAACGTTTCTCACCCTACCAACTCCTTTCCTACACAAAACCAGTGCCATTTCTTTCTCCAACAAGAGGCCCTCATTTTCGCAGAGGAGCTCTCTCAAGATCAATGCAATTGCCAAAAAATGGGAACCCACTAAGGTTGTGCCTCAGGCTGACAGAGTTCTTATTCGTTTGGAAGAGCTATCAGATAAAACAGCTGGGGGAGTTTTGCTGCCCAAATCAGCCGTGAAATTTGAACGATATCTCGTGGGAGAAATCCTAAATGTTGGTGCTGAGGCTGGAGAACTAAAGGCTGGAACAAAGGTACTATTCACTGACATGAGTGCTTATGAGGTGGATTTGGGGACTGATGCAAAGCACTGCTTCTGCAAAGCAAGTGACTTGTTGGCTGTGGTTGAGTAG 405 0.4593 MASTFLTLPTPFLHKTSAISFSNKRPSFSQRSSLKINAIAKKWEPTKVVPQADRVLIRLEELSDKTAGGVLLPKSAVKFERYLVGEILNVGAEAGELKAGTKVLFTDMSAYEVDLGTDAKHCFCKASDLLAVVE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0781 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra9g0781 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Vra9g0781 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Vra9g0781 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra9g0781 134 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 16 133 - -
Vra9g0781 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Vra9g0781 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 16 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0781 15 134 Calmodulin-binding Proteins AT5G20720 27.273 8.30e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0781 K04078 - gmx:100306026 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0781 9 9005313 9007960 Vra9g0781 9 9005313 9007960 ECH