Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0764 ATGTCCTTCAATCAATCAAAGGTGGAAAAGAACGACGTCGTTTACAGAAGAAACGGACGATCATCCACCTTTAATCAGCAAAGAGGTTCCTACGGCAAAGCTGCTGGCGATGGCGGTGGAATCGCGCCGTCAAACAATTCATTATCCACTGCCCGAAGGCTAAATCCTTCCCAGGGAAATTCAACAGAGTCAAACAATGCATCTGCTGCTCGGAACATTAGTAATGGTATCCATGGACAGTCCCACTTACATGGTGCACCAGATGGGCCAATTACAAAGTCATCTGAATCATCAGCTGGGCATAAGAGCACTGGAATTGTTCCAAAGGCTGAAACTGCTTCATTGCCCCCTTTAATTTCTGATCCAGTACTTCCCACAAGCCTTGCTAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTGTTCCTGGCGTCATTAATGGGATGGCAATTCCTGCTCGTACAAGTTCAGCTCCTGCTAGTTTTGATAAGCAGAAGCCTGATCAGGCTCTTGATGACTCTGACAAATCTGTGTCTTCGGATCCAATTCCTCCTGTTCCAAAGCAGCAGAAATCACACGAGAAAGATGCTGGTGTCAATGAGCAATCTAACGTTGAGGAGATTAAGGCAAACAAGGATTCTGAGGTGTCAATTTTAACCTCAGTAAATCAGATGTCAAAACCCTTTGTTGTTCCTGTAACTGGGATTTCAATCTCAACTTCATATCACCAATCACAGGCTCCTTTACAGTTTGGAGGTGCTAATCCACAGATTCAATCTCATGGCATGACAACATCATCCATCCAAATGCCTATACCGATGCCTTTACCAATTGGTAATGCTACACAAGTGCAACAGCCGGTTTTTATTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAAGGCCAAAACATTAATTATTCTCCCCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTTGTCAATATCCACAACAGAAAGGAGGAAAATTTGCAAGTCCTCGAAAAACTACCCATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTGATAAAAGGAAGGATGCATACTCAAATGGTGGGTCATCCTGTGTTAGAGCACATCCTAACATACCTTCTCAATCCCAGCCTGTTAAATCTTTTCCGGCTTCTCATCCTATGAACTATTTTTCATCCAACTCCTATAATACAAATTCTCCTTATTATCCACCTAATTCTCTCCCATTAACAAGTAGCCCAATGACTCCTAATTGTCAACCACCAACATTTAATTTTCCTCTGCACCATGGTCCCCAAGGTGTGAGTTTTATGAATTCATCTGCACAAGGTTCCTCACCTACTAATAAAACTAGCACTCCAACAGGGATTACATCTATGACCAATAAGCCTAATGGTACAACTACTATAGTGGACTCATCCTTGTCAAATTCCTGTATTGCTGATGTTCAAAATGGAGAATCCCCTGGTTCAACAATATCTTGTGATGTTAGCTCCTCCATGTTGCAAAAAGGATCGGAAACCTGTTCAGAAGTTTCTCCACAACAATCTAAGTTTTCTAGTGATTTTGTCACAGATGCGTCTAATAATGAAGGTGGAAGGGAATCTCTCGGTATATCCAACTCTTTGAAGGATAAAAAACCAGGGAAGAAAGATCAAATATCACAAAATCAGGTTTCTGTACGATCTCCCACAATGGACACTATACGTTCTGGAGTTGTTGATCAAGTTATATCTGATATTGGAGTACCCGATGCTTTAGGAACTAAAAAAAATCATTCTGCAGCAATTACTATTGAAGATCTTCCAGGATCTGATACAATTTCTACTGGTGTTGAAGTGGAGACCAATGGGTCTGTAGAAGCTTCTGCTTATGTTTCAGGGGAAGGATGTGGTGCACAAACTATTGACAAAGTTCACAATCAGATGCCTGATAAGACATATAAATTAGTTGAAGGAAACTTTGGCTCATCAGATCTGCAGTTTACTGATCTTCCAAAAACAACACTAAAGCATGTTAAGAACGATTCAGAGAATGTTGATGTTGAGTCAGGTACCAAGGATAGACCAACTATAGAACCAAATAAGGTGAAAAACACATCTAAAGGAAAGAAGAAGAGAAGAGAGATACTTCAGAAAGCAGATGCCGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCTGGGGAAAAGAGAGATGTCTTAAGTTCTGAGAGCAAGGAAAGTGTTACTATTCCTCTAAGCTTGAAACAATTTGATGTTGGTCAGTCTGATATTAAAGCCGGTGAGAAATGTGATCATAATAAAGTTGAGCTTGATGATTGGGAGGACGTTGCTGACATGTCTACCCCTAAACTGGAGGTTCATGACATATCTCAAAAAGTAGGTGAAGGACATGGAAGTACAACCAAAAAATATTCACGTGATTTCCTTCTGAAATTTGTAGAGCAGTGCATTGATCTTCCTGAAGATTTTGAAATCACTGCAGACATTGGAGCTTTGATGAATGCCAATATTGGCGGCTCTCATATTTTTGAGCGTGATTCACATCCTAATCCTGGAAGAGCTGTAGGTGGGTTGTCTCGGATGGATCGTCGTGGCGATGTTATTATGGAGGACGATAGATGGAACAGAGTTTCTGGTTCTTTTCGTTCTGGACGTGGTCCAGAAGGCGCCGGAGGAAATTCAGGATATCGATTTGGTCATGGAGGCAACTTTGGTGTTTTAAGGAACCCTCGTGCACAAACACCTCTACAATACGGTGGAGGGATCCTTTTTGGGCCAATGCAATCTGGGGGAAATCAAGGTGGAAGAAATAGCCCTAATGGGGAGAGATGGCAGCGATCTGCTAGCTTCCAACAGAGGGGTTTAATTCCTTCTCCAAACCAAACTCCTTTACAAATAATGCACAAAGCTGAGAATAAGTACGAAGTGGGTAAAGTGAAAGATGTGGAAGAGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCACAAAATTTTGACAAACTCTTTGAACAGGTGAAAGAAGTTAATATTGACAATGCAATCACCCTCATCGGTGTCATTTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTGAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGGGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTACTGAGGAAAGGGGAGAAAGAAGAGTTAAGGCAAGAAGACGAATGTTGGGAAACATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAAGATCCAGATGAAGAAAACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCGTATTTTGAAAGAATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGGAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCCAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGACAATCCCATGCTGGTAGGTCAAATCGTGGTCCTGGTAACAATCAATCAAGTAGAAGGAATCCCATTGATTTTAGTCCAAGAGTGTCTTCTAATTCTCAAATGGGTGGATTATGTGGTCTTCCAACTCAAGCACGTGGGTATGGTGGTTCTCATGATGCTCAATTTGAGGAACAACAATCTTATGAAGCTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGAGATGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAATTTCCAATCTGCCAATATCTGATGTGGTTCCTGTGCCTAGAGACCCTCATATAATGGCTGCAGGTCTTAATGGTCAGAGTAATTCAACAGAGCGCACACAATATAACTCAATGGAGGATCTTGGGTCAAGACGTGGTACTAACAGGTCTTTAGGTCCATCTACTCATGATCAATCAATTGCCCCTGAGCATAATGTAAACCATGGTAACAGAAACTTGAGGAGTGTTTCACATGCTGCTCAATTGCAAGGATCCATAATCTCTCAAAATGCTTATTCAGATAAGATTGTGTCAGAAGAACAACTGGGAGACATGTCCTTGTCAGCCATAAGAGAATACTACAGTGCTAGAGATGAGAAAGAACTTGTTTTGTGTATCAAAGATTTGAACTCTCCAAGCTTTTATCCTTCTATGGTTTCTCTCTGGGTCACAGATTCATTTGAGAGAAAGGACACAGAAAGAGATCTTCTTGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCACACTATAAGTCAAGTCCAACTCATCAAAGGGTTTGAATCTGTTCTCTGTACATTGGAGGATGTCATTAATGATGCCCCTAGAGCAGCTGAGTTTCTTGGCAGAATTTTTGCTGAAGTCATAATAGAGAGAGTAGCTACTTTTACTGAGATTGCACAATTAATACATGATGGTGGAGAAGAGCCAGGTAGTCTCTTAGAAATTGGACTTGCAGGTGATGTTCTTGGAAGCACGTTGGAGGTAATTCAAAATGAAAAGGGAGACGTGCTTCTAAATGAGATTCTTTCAGGAACCTCTAATTTCCAATTGAAAACTTTCCAGCCACCTAATGCTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4923 0.4061 MSFNQSKVEKNDVVYRRNGRSSTFNQQRGSYGKAAGDGGGIAPSNNSLSTARRLNPSQGNSTESNNASAARNISNGIHGQSHLHGAPDGPITKSSESSAGHKSTGIVPKAETASLPPLISDPVLPTSLAKGDDESKAFPFQFGSIVPGVINGMAIPARTSSAPASFDKQKPDQALDDSDKSVSSDPIPPVPKQQKSHEKDAGVNEQSNVEEIKANKDSEVSILTSVNQMSKPFVVPVTGISISTSYHQSQAPLQFGGANPQIQSHGMTTSSIQMPIPMPLPIGNATQVQQPVFIPGLQPHPMHPQGIMHQGQNINYSPQMGNQLGNMGIGIGCQYPQQKGGKFASPRKTTHVKITHPETHEELRLDKRKDAYSNGGSSCVRAHPNIPSQSQPVKSFPASHPMNYFSSNSYNTNSPYYPPNSLPLTSSPMTPNCQPPTFNFPLHHGPQGVSFMNSSAQGSSPTNKTSTPTGITSMTNKPNGTTTIVDSSLSNSCIADVQNGESPGSTISCDVSSSMLQKGSETCSEVSPQQSKFSSDFVTDASNNEGGRESLGISNSLKDKKPGKKDQISQNQVSVRSPTMDTIRSGVVDQVISDIGVPDALGTKKNHSAAITIEDLPGSDTISTGVEVETNGSVEASAYVSGEGCGAQTIDKVHNQMPDKTYKLVEGNFGSSDLQFTDLPKTTLKHVKNDSENVDVESGTKDRPTIEPNKVKNTSKGKKKRREILQKADAAGSTSDLYNAYKGPGEKRDVLSSESKESVTIPLSLKQFDVGQSDIKAGEKCDHNKVELDDWEDVADMSTPKLEVHDISQKVGEGHGSTTKKYSRDFLLKFVEQCIDLPEDFEITADIGALMNANIGGSHIFERDSHPNPGRAVGGLSRMDRRGDVIMEDDRWNRVSGSFRSGRGPEGAGGNSGYRFGHGGNFGVLRNPRAQTPLQYGGGILFGPMQSGGNQGGRNSPNGERWQRSASFQQRGLIPSPNQTPLQIMHKAENKYEVGKVKDVEEVKQRQLKAILNKLTPQNFDKLFEQVKEVNIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSTEERGERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSHAGRSNRGPGNNQSSRRNPIDFSPRVSSNSQMGGLCGLPTQARGYGGSHDAQFEEQQSYEAKTLSVPLPQRSLGDDSITLVPQGGLARGMSMRGSTTISNLPISDVVPVPRDPHIMAAGLNGQSNSTERTQYNSMEDLGSRRGTNRSLGPSTHDQSIAPEHNVNHGNRNLRSVSHAAQLQGSIISQNAYSDKIVSEEQLGDMSLSAIREYYSARDEKELVLCIKDLNSPSFYPSMVSLWVTDSFERKDTERDLLAKLLINLVKSQHHTISQVQLIKGFESVLCTLEDVINDAPRAAEFLGRIFAEVIIERVATFTEIAQLIHDGGEEPGSLLEIGLAGDVLGSTLEVIQNEKGDVLLNEILSGTSNFQLKTFQPPNAKISRKLEKFI* 1641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0764 1640 MobiDBLite consensus disorder prediction 160 208 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 1227 1286 - -
Vra9g0764 1640 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 697 1630 IPR045208 GO:0003743
Vra9g0764 1640 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 100 435 IPR045208 GO:0003743
Vra9g0764 1640 MobiDBLite consensus disorder prediction 691 721 - -
Vra9g0764 1640 SMART if4_15 1005 1227 IPR003890 GO:0003723|GO:0005515
Vra9g0764 1640 MobiDBLite consensus disorder prediction 948 967 - -
Vra9g0764 1640 Gene3D - 1443 1640 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 448 482 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 1227 1253 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 1390 1420 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 520 579 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 42 79 - -
Vra9g0764 1640 Coils Coil 1087 1107 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 1097 1123 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 372 395 - -
Vra9g0764 1640 Gene3D - 1005 1240 - -
Vra9g0764 1640 SMART ma3_7 1452 1566 IPR003891 -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 1 119 - -
Vra9g0764 1640 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 100 435 - -
Vra9g0764 1640 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 697 1630 - -
Vra9g0764 1640 Pfam MIF4G domain 1005 1227 IPR003890 GO:0003723|GO:0005515
Vra9g0764 1640 MobiDBLite consensus disorder prediction 691 713 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 945 967 - -
Vra9g0764 1640 SUPERFAMILY ARM repeat 1447 1638 IPR016024 -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 1254 1286 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 520 551 - -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 378 395 - -
Vra9g0764 1640 Pfam MA3 domain 1458 1563 IPR003891 -
Vra9g0764 1640 ProSiteProfiles MI domain profile. 1451 1575 IPR003891 -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 192 208 - -
Vra9g0764 1640 SUPERFAMILY ARM repeat 1001 1229 IPR016024 -
Vra9g0764 1640 MobiDBLite consensus disorder prediction 439 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0764 Vra-Chr9 8759540 8769607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0764 1 1639 Eukaryotic Initiation Factors Gene Family AT3G60240 43.924 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0764 K03260 - gmx:100798562 2334.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0764 9 8759540 8769607 Vra9g0764 9 8759540 8769607 ECH