Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0762 ATGGAGATGAACACAGTGAAGATTTTGTTAGGAGCAGTTTTGGCGTTGTTGATTCATGTCTTCAATGTGTTTGTGTTTAGGCCAAGATCAATGAGAGCGAAGCTTCAGAAGCAGGGGATTAAAGGGCCTTCTCCTCATTTCTACTTTGGCAACATCCCAGAAATCAAGAGCATTTTGCTGCAAGTTCAGTCAGCAGCACCAGCCACTGAAGTTACAGAGAAAGATGAAGGATCTTCTCTTTCTCACAATTGGCCTTTCACTCTCTTCCCTCATGTTCAAAAGTGGATCAAACAATATGGTCCCATGTACTTGTTTTCTTCTGGGTCTATACAGTGGCTAATGGTGTCAGATATAGAGATGGTGAAGGAAGTGGTCGTGCACACCTCTTTGAATCTAGGGAAGCCTACATATCTATCCAAAGATATGAGGCCACTCTTGGGCAAAGGCATAATAACGTCAAATGGGTCAATTTGGGTTCACCAGAGGAAGATAATTGCCCCAGAACTGTTCCTTGTTAAGGTGAAGGCAATGGTTAATCTGATAGTGGACTCAACAAATACAACACTAAGGTCTTGGGAGGGTAGACTTGAAGGTGAGGGAGCACCATCAGAGATTAAAATTGATGAAGATCTTCGAAGTTTGTCAGCTGACATAATTGCCAGAGCTTGTTTTGGGAGCAATTACACTGAAGGAAAAGAAATATTCTCAAAGTTAAGAGATCTTCAAATTCTCTTGTCCAAGCGTAATTATGGAATTCCAGGCTTTCGATACTTGCCAAACAAAAGCAACAGACAAACGTGGAGATTGGGGAAAGAGATAGACTCAAAGATAGCAAAGCTCATAAAACAACGTCTGGAGGAAACTCATGAGCAGGATCTCTTACAAATGATTCTTGAGGGTGCAAAGAACTGTGAGGGTGGTGATGGCCTCATATCAGATTCAATCTCATGTGACAGGTTTATGATAGATAACTGCAAAAATATATTCTTTGCTGGACATGAGACTACTGCCATCACAGCATCATGGTGCTTAATGCTGTTAGCTGAGCATCAAGATTGGCAAGACCGTGTCCGAGCTGAGGTGCTTGAAGTTTGTGGAAAAAATGCTCCTGATGCAAACATGCTTAGAAGCTTGAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGCTGTATCCACCAGCAGTTTTTGTTGTTAGAACAGCTCTTCAAGATGTAAATCTAAAAGGGTTACTAATTCCAGAAGGAATGAACATTCAGATTCCACTCTCAGTGCTGCAGCGTGACCCTCTTCTCTGGGGTCCTGATGCTCACAAGTTCAACCCGGAAAGATTTGCAAATGGGGTGCTTGGAGCATGCAAGGTTCCACAAGCTTATATACCATTTGGAATAGGGGCACGGGTATGTGTTGGACAGCACTTAGCCATGGTAGAACTCAAGGTGATTTTGTCTCTGATTCTGATGAAGTTTCACTTCTCTCTCTCACCAAGTTACTGCCATTCACCAGCCTTTCGTTTGGTCGTAGTACCTGGTGGCCAGGGAGTTGTTCTTCAGATGACAAGAATTTGA 1569 0.427 MEMNTVKILLGAVLALLIHVFNVFVFRPRSMRAKLQKQGIKGPSPHFYFGNIPEIKSILLQVQSAAPATEVTEKDEGSSLSHNWPFTLFPHVQKWIKQYGPMYLFSSGSIQWLMVSDIEMVKEVVVHTSLNLGKPTYLSKDMRPLLGKGIITSNGSIWVHQRKIIAPELFLVKVKAMVNLIVDSTNTTLRSWEGRLEGEGAPSEIKIDEDLRSLSADIIARACFGSNYTEGKEIFSKLRDLQILLSKRNYGIPGFRYLPNKSNRQTWRLGKEIDSKIAKLIKQRLEETHEQDLLQMILEGAKNCEGGDGLISDSISCDRFMIDNCKNIFFAGHETTAITASWCLMLLAEHQDWQDRVRAEVLEVCGKNAPDANMLRSLKTLTMVIQETLRLYPPAVFVVRTALQDVNLKGLLIPEGMNIQIPLSVLQRDPLLWGPDAHKFNPERFANGVLGACKVPQAYIPFGIGARVCVGQHLAMVELKVILSLILMKFHFSLSPSYCHSPAFRLVVVPGGQGVVLQMTRI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0762 522 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 513 - -
Vra9g0762 522 Pfam Cytochrome P450 92 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 Gene3D Cytochrome P450 24 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 513 - -
Vra9g0762 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Vra9g0762 522 SUPERFAMILY Cytochrome P450 85 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra9g0762 522 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0762 Vra-Chr9 8751708 8755975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0762 120 519 Cytochrome P450 AT5G24900 47.445 1.38e-130 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0762 K24544 - gmx:100780335 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0762 9 8751708 8755975 Vra9g0762 9 8751708 8755975 ECH